RNA–Protein interactions for RNA: ENST00000486361.5

LIMK1-206, Transcript of LIM domain kinase 1, humanhuman

TSL 4

Gene LIMK1, Length 569 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-206ENST00000486361 PRPF38BQ5VTL8 546 aaKnown RBP22.76■■□□□ 1.23
LIMK1-206ENST00000486361 CCDC62Q6P9F0 684 aa22.76■■□□□ 1.23
LIMK1-206ENST00000486361 PCSK9Q8NBP7 692 aaKnown RBP22.76■■□□□ 1.23
LIMK1-206ENST00000486361 OR6J1Q8NGC5 347 aa22.76■■□□□ 1.23
LIMK1-206ENST00000486361 VTI1AQ96AJ9 217 aa22.76■■□□□ 1.23
LIMK1-206ENST00000486361 BARHL2Q9NY43 387 aa22.76■■□□□ 1.23
LIMK1-206ENST00000486361 RTEL1Q9NZ71 1219 aa22.76■■□□□ 1.23
LIMK1-206ENST00000486361 ZMYND8Q9ULU4 1186 aaPredicted RBP22.76■■□□□ 1.23
LIMK1-206ENST00000486361 ATP11BQ9Y2G3 1177 aa22.76■■□□□ 1.23
LIMK1-206ENST00000486361 Q9Y3F1 56 aa22.76■■□□□ 1.23
LIMK1-206ENST00000486361 SYN1P17600 705 aa22.75■■□□□ 1.23
LIMK1-206ENST00000486361 CCND2P30279 289 aa22.75■■□□□ 1.23
LIMK1-206ENST00000486361 NKX3-2P78367 333 aa22.75■■□□□ 1.23
LIMK1-206ENST00000486361 AKAP17AQ02040 695 aaKnown RBP22.75■■□□□ 1.23
LIMK1-206ENST00000486361 PGBD1Q96JS3 809 aa22.75■■□□□ 1.23
LIMK1-206ENST00000486361 MOXD2PA6NHM9 499 aa22.74■■□□□ 1.23
LIMK1-206ENST00000486361 ADAMTS3O15072 1205 aa22.74■■□□□ 1.23
LIMK1-206ENST00000486361 SORBS3O60504 671 aa22.74■■□□□ 1.23
LIMK1-206ENST00000486361 MRPS9P82933 396 aaKnown RBP22.74■■□□□ 1.23
LIMK1-206ENST00000486361 SCRN1Q12765 414 aa22.74■■□□□ 1.23
LIMK1-206ENST00000486361 TRIM60Q495X7 471 aa22.74■■□□□ 1.23
LIMK1-206ENST00000486361 CXCL17Q6UXB2 119 aa22.74■■□□□ 1.23
LIMK1-206ENST00000486361 SLKQ9H2G2 1235 aaPredicted RBP22.74■■□□□ 1.23
LIMK1-206ENST00000486361 RIC8AQ9NPQ8 531 aa22.74■■□□□ 1.23
LIMK1-206ENST00000486361 STARD7Q9NQZ5 370 aa22.74■■□□□ 1.23
LIMK1-206ENST00000486361 DDX41Q9UJV9 622 aaKnown RBP22.74■■□□□ 1.23
LIMK1-206ENST00000486361 PCDHA6Q9UN73 950 aa22.74■■□□□ 1.23
LIMK1-206ENST00000486361 PCDHA8Q9Y5H6 950 aa22.74■■□□□ 1.23
LIMK1-206ENST00000486361 MRVI1Q9Y6F6 885 aa22.74■■□□□ 1.23
LIMK1-206ENST00000486361 CPLX1O14810 134 aa22.73■■□□□ 1.23
LIMK1-206ENST00000486361 ADCY7P51828 1080 aa22.73■■□□□ 1.23
LIMK1-206ENST00000486361 SSRP1Q08945 709 aaKnown RBP22.73■■□□□ 1.23
LIMK1-206ENST00000486361 RNF26Q9BY78 433 aaPredicted RBP22.73■■□□□ 1.23
LIMK1-206ENST00000486361 C22orf23Q9BZE7 217 aa22.73■■□□□ 1.23
LIMK1-206ENST00000486361 TMEM260Q9NX78 707 aa22.73■■□□□ 1.23
LIMK1-206ENST00000486361 SPDYE3A6NKU9 549 aa22.72■■□□□ 1.23
LIMK1-206ENST00000486361 hCG_1984214I3L0E3 225 aa22.72■■□□□ 1.23
LIMK1-206ENST00000486361 NKRFO15226 690 aaKnown RBP eCLIP22.72■■□□□ 1.23
LIMK1-206ENST00000486361 LARGE1O95461 756 aa22.72■■□□□ 1.23
LIMK1-206ENST00000486361 MYL3P08590 195 aa22.72■■□□□ 1.23
LIMK1-206ENST00000486361 PPP1R18Q6NYC8 613 aa22.72■■□□□ 1.23
LIMK1-206ENST00000486361 ZNF713Q8N859 430 aaPredicted RBP22.72■■□□□ 1.23
LIMK1-206ENST00000486361 NECAB1Q8N987 351 aa22.72■■□□□ 1.23
LIMK1-206ENST00000486361 GLT1D1Q96MS3 346 aa22.72■■□□□ 1.23
LIMK1-206ENST00000486361 FRMPD4Q14CM0 1322 aa22.72■■□□□ 1.23
LIMK1-206ENST00000486361 ZEB2O60315 1214 aa22.71■■□□□ 1.23
LIMK1-206ENST00000486361 PFKFB2O60825 505 aa22.71■■□□□ 1.23
LIMK1-206ENST00000486361 GH1P01241 217 aa22.71■■□□□ 1.23
LIMK1-206ENST00000486361 SP2Q02086 613 aa22.71■■□□□ 1.23
LIMK1-206ENST00000486361 SNX17Q15036 470 aa22.71■■□□□ 1.23
LIMK1-206ENST00000486361 ANKRD1Q15327 319 aa22.71■■□□□ 1.23
LIMK1-206ENST00000486361 KIF2CQ99661 725 aa22.71■■□□□ 1.23
LIMK1-206ENST00000486361 BCAS3Q9H6U6 928 aa22.71■■□□□ 1.23
LIMK1-206ENST00000486361 VPS54Q9P1Q0 977 aa22.71■■□□□ 1.23
LIMK1-206ENST00000486361 PSMC6P62333 389 aa22.7■■□□□ 1.22
LIMK1-206ENST00000486361 TLE2Q04725 743 aa22.7■■□□□ 1.22
LIMK1-206ENST00000486361 ARHGAP1Q07960 439 aa22.7■■□□□ 1.22
LIMK1-206ENST00000486361 ME3Q16798 604 aa22.7■■□□□ 1.22
LIMK1-206ENST00000486361 JAKMIP3Q5VZ66 844 aa22.7■■□□□ 1.22
LIMK1-206ENST00000486361 PCNX4Q63HM2 1172 aa22.7■■□□□ 1.22
LIMK1-206ENST00000486361 AFG1LQ8WV93 481 aa22.7■■□□□ 1.22
LIMK1-206ENST00000486361 RBM27Q9P2N5 1060 aaKnown RBP22.7■■□□□ 1.22
LIMK1-206ENST00000486361 PQBP1O60828 265 aaKnown RBP22.69■■□□□ 1.22
LIMK1-206ENST00000486361 CPT1AP50416 773 aa22.69■■□□□ 1.22
LIMK1-206ENST00000486361 TRIM22Q8IYM9 498 aa22.69■■□□□ 1.22
LIMK1-206ENST00000486361 PPP1R13LQ8WUF5 828 aa22.69■■□□□ 1.22
LIMK1-206ENST00000486361 AIFM3Q96NN9 605 aa22.69■■□□□ 1.22
LIMK1-206ENST00000486361 ELP1O95163 1332 aa22.68■■□□□ 1.22
LIMK1-206ENST00000486361 SEMA3FQ13275 785 aa22.68■■□□□ 1.22
LIMK1-206ENST00000486361 C1orf53Q5VUE5 145 aa22.68■■□□□ 1.22
LIMK1-206ENST00000486361 CPLX2Q6PUV4 134 aaKnown RBP22.68■■□□□ 1.22
LIMK1-206ENST00000486361 DHX37Q8IY37 1157 aaKnown RBP22.68■■□□□ 1.22
LIMK1-206ENST00000486361 INPP4AQ96PE3 977 aaPredicted RBP22.68■■□□□ 1.22
LIMK1-206ENST00000486361 ANO3Q9BYT9 981 aa22.68■■□□□ 1.22
LIMK1-206ENST00000486361 ZMYND12Q9H0C1 365 aa22.68■■□□□ 1.22
LIMK1-206ENST00000486361 C6orf50Q9HD87 102 aa22.68■■□□□ 1.22
LIMK1-206ENST00000486361 KIAA1217Q5T5P2 1943 aa22.68■■□□□ 1.22
LIMK1-206ENST00000486361 GRIN2DO15399 1336 aa22.67■■□□□ 1.22
LIMK1-206ENST00000486361 A0A0U1RQG5 324 aaPredicted RBP22.67■■□□□ 1.22
LIMK1-206ENST00000486361 A6NJR5 290 aa22.67■■□□□ 1.22
LIMK1-206ENST00000486361 CTDNEP1O95476 244 aa22.67■■□□□ 1.22
LIMK1-206ENST00000486361 UBA1P22314 1058 aaKnown RBP22.67■■□□□ 1.22
LIMK1-206ENST00000486361 CLK2P49760 499 aaKnown RBP22.67■■□□□ 1.22
LIMK1-206ENST00000486361 SH3RF1Q7Z6J0 888 aa22.67■■□□□ 1.22
LIMK1-206ENST00000486361 RASGRP4Q8TDF6 673 aa22.67■■□□□ 1.22
LIMK1-206ENST00000486361 CCDC12Q8WUD4 166 aaPredicted RBP22.67■■□□□ 1.22
LIMK1-206ENST00000486361 PRDM5Q9NQX1 630 aaPredicted RBP22.67■■□□□ 1.22
LIMK1-206ENST00000486361 SPATA31C2B4DYI2 1134 aa22.66■■□□□ 1.22
LIMK1-206ENST00000486361 ARVCFO00192 962 aa22.66■■□□□ 1.22
LIMK1-206ENST00000486361 STAM2O75886 525 aa22.66■■□□□ 1.22
LIMK1-206ENST00000486361 DEXIO95424 95 aa22.66■■□□□ 1.22
LIMK1-206ENST00000486361 GGPS1O95749 300 aa22.66■■□□□ 1.22
LIMK1-206ENST00000486361 RBM25P49756 843 aaKnown RBP22.66■■□□□ 1.22
LIMK1-206ENST00000486361 CDK7P50613 346 aa22.66■■□□□ 1.22
LIMK1-206ENST00000486361 PURAQ00577 322 aaKnown RBP22.66■■□□□ 1.22
LIMK1-206ENST00000486361 ITGA7Q13683 1181 aa22.66■■□□□ 1.22
LIMK1-206ENST00000486361 GNPTABQ3T906 1256 aa22.66■■□□□ 1.22
LIMK1-206ENST00000486361 BRDTQ58F21 947 aaPredicted RBP22.66■■□□□ 1.22
LIMK1-206ENST00000486361 CELF3Q5SZQ8 465 aaKnown RBP22.66■■□□□ 1.22
LIMK1-206ENST00000486361 MYSM1Q5VVJ2 828 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms