RNA–Protein interactions for RNA: ENST00000486066.5

CHRD-216, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-216ENST00000486066 FAM178BQ8IXR5 827 aa22.67■■□□□ 1.22
CHRD-216ENST00000486066 MPHOSPH6Q99547 160 aaKnown RBP22.67■■□□□ 1.22
CHRD-216ENST00000486066 NOD1Q9Y239 953 aa22.67■■□□□ 1.22
CHRD-216ENST00000486066 ABHD14A-ACY1A0A1B0GW23 586 aa22.66■■□□□ 1.22
CHRD-216ENST00000486066 FGAP02671 866 aa22.66■■□□□ 1.22
CHRD-216ENST00000486066 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.66■■□□□ 1.22
CHRD-216ENST00000486066 WNT8BQ93098 351 aa22.66■■□□□ 1.22
CHRD-216ENST00000486066 EMID1Q96A84 441 aaPredicted RBP22.66■■□□□ 1.22
CHRD-216ENST00000486066 TGS1Q96RS0 853 aaKnown RBP22.66■■□□□ 1.22
CHRD-216ENST00000486066 COL20A1Q9P218 1284 aa22.66■■□□□ 1.22
CHRD-216ENST00000486066 COL4A6Q14031 1691 aa22.65■■□□□ 1.22
CHRD-216ENST00000486066 MYH7BA7E2Y1 1941 aa22.65■■□□□ 1.22
CHRD-216ENST00000486066 HAS3O00219 553 aa22.65■■□□□ 1.22
CHRD-216ENST00000486066 HOXD8P13378 290 aaPredicted RBP22.65■■□□□ 1.22
CHRD-216ENST00000486066 MX1P20591 662 aa22.65■■□□□ 1.22
CHRD-216ENST00000486066 TBC1D5Q92609 795 aa22.65■■□□□ 1.22
CHRD-216ENST00000486066 TTC14Q96N46 770 aa22.65■■□□□ 1.22
CHRD-216ENST00000486066 F2P00734 622 aa22.64■■□□□ 1.21
CHRD-216ENST00000486066 GH1P01241 217 aa22.64■■□□□ 1.21
CHRD-216ENST00000486066 LY6KQ17RY6 165 aa22.64■■□□□ 1.21
CHRD-216ENST00000486066 HDAC6Q9UBN7 1215 aa22.64■■□□□ 1.21
CHRD-216ENST00000486066 MYH6P13533 1939 aa22.64■■□□□ 1.21
CHRD-216ENST00000486066 ATG2AQ2TAZ0 1938 aa22.64■■□□□ 1.21
CHRD-216ENST00000486066 ZNF318Q5VUA4 2279 aa22.64■■□□□ 1.21
CHRD-216ENST00000486066 PRR33A8MZF0 331 aa22.63■■□□□ 1.21
CHRD-216ENST00000486066 B4DLN1 442 aa22.63■■□□□ 1.21
CHRD-216ENST00000486066 MRPL12P52815 198 aaKnown RBP22.63■■□□□ 1.21
CHRD-216ENST00000486066 SP7Q8TDD2 431 aaPredicted RBP22.63■■□□□ 1.21
CHRD-216ENST00000486066 SYTL5Q8TDW5 730 aaPredicted RBP22.63■■□□□ 1.21
CHRD-216ENST00000486066 HELLSQ9NRZ9 838 aa22.63■■□□□ 1.21
CHRD-216ENST00000486066 DDX41Q9UJV9 622 aaKnown RBP22.63■■□□□ 1.21
CHRD-216ENST00000486066 PCDHB15Q9Y5E8 787 aa22.63■■□□□ 1.21
CHRD-216ENST00000486066 LAMA4Q16363 1823 aa22.62■■□□□ 1.21
CHRD-216ENST00000486066 EFCAB14O75071 495 aa22.62■■□□□ 1.21
CHRD-216ENST00000486066 HTRA4P83105 476 aaPredicted RBP22.62■■□□□ 1.21
CHRD-216ENST00000486066 PTK7Q13308 1070 aa22.62■■□□□ 1.21
CHRD-216ENST00000486066 HIC1Q14526 733 aa22.62■■□□□ 1.21
CHRD-216ENST00000486066 COL19A1Q14993 1142 aa22.62■■□□□ 1.21
CHRD-216ENST00000486066 GJD3Q8N144 294 aa22.62■■□□□ 1.21
CHRD-216ENST00000486066 TAAR1Q96RJ0 339 aa22.62■■□□□ 1.21
CHRD-216ENST00000486066 ZBED2Q9BTP6 218 aa22.62■■□□□ 1.21
CHRD-216ENST00000486066 MTUS1Q9ULD2 1270 aa22.62■■□□□ 1.21
CHRD-216ENST00000486066 USP34Q70CQ2 3546 aa22.62■■□□□ 1.21
CHRD-216ENST00000486066 IL9P15248 144 aa22.61■■□□□ 1.21
CHRD-216ENST00000486066 CASTP20810 708 aaKnown RBP22.61■■□□□ 1.21
CHRD-216ENST00000486066 GPATCH4Q5T3I0 446 aaKnown RBP22.61■■□□□ 1.21
CHRD-216ENST00000486066 NEK9Q8TD19 979 aa22.61■■□□□ 1.21
CHRD-216ENST00000486066 IWS1Q96ST2 819 aa22.61■■□□□ 1.21
CHRD-216ENST00000486066 CPVLQ9H3G5 476 aa22.61■■□□□ 1.21
CHRD-216ENST00000486066 NLRC5Q86WI3 1866 aa22.6■■□□□ 1.21
CHRD-216ENST00000486066 A0A0D9SFI3 127 aa22.6■■□□□ 1.21
CHRD-216ENST00000486066 HSPD1P10809 573 aaKnown RBP22.6■■□□□ 1.21
CHRD-216ENST00000486066 PSEN2P49810 448 aa22.6■■□□□ 1.21
CHRD-216ENST00000486066 DGKDQ16760 1214 aa22.6■■□□□ 1.21
CHRD-216ENST00000486066 USH1GQ495M9 461 aa22.6■■□□□ 1.21
CHRD-216ENST00000486066 RRP12Q5JTH9 1297 aaKnown RBP22.6■■□□□ 1.21
CHRD-216ENST00000486066 ZNF618Q5T7W0 954 aa22.6■■□□□ 1.21
CHRD-216ENST00000486066 SEPT14Q6ZU15 432 aa22.6■■□□□ 1.21
CHRD-216ENST00000486066 NSUN6Q8TEA1 469 aaKnown RBP22.6■■□□□ 1.21
CHRD-216ENST00000486066 FAM227BQ96M60 508 aa22.6■■□□□ 1.21
CHRD-216ENST00000486066 C17orf80Q9BSJ5 609 aa22.6■■□□□ 1.21
CHRD-216ENST00000486066 MYO7AQ13402 2215 aa22.59■■□□□ 1.21
CHRD-216ENST00000486066 GRXCR2A6NFK2 248 aa22.59■■□□□ 1.21
CHRD-216ENST00000486066 PCP11498 1178 aaKnown RBP22.59■■□□□ 1.21
CHRD-216ENST00000486066 GHRHRQ02643 423 aa22.59■■□□□ 1.21
CHRD-216ENST00000486066 IKBKEQ14164 716 aa22.59■■□□□ 1.21
CHRD-216ENST00000486066 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.59■■□□□ 1.21
CHRD-216ENST00000486066 ZNF589Q86UQ0 364 aaPredicted RBP22.59■■□□□ 1.21
CHRD-216ENST00000486066 TICAM2Q86XR7 235 aa22.59■■□□□ 1.21
CHRD-216ENST00000486066 TBC1D10CQ8IV04 446 aa22.59■■□□□ 1.21
CHRD-216ENST00000486066 PPTC7Q8NI37 304 aa22.59■■□□□ 1.21
CHRD-216ENST00000486066 EVI5LQ96CN4 794 aa22.59■■□□□ 1.21
CHRD-216ENST00000486066 ABCB11O95342 1321 aa22.58■■□□□ 1.21
CHRD-216ENST00000486066 RALGAPA2Q2PPJ7 1873 aa22.58■■□□□ 1.21
CHRD-216ENST00000486066 RGS20O76081 388 aa22.58■■□□□ 1.21
CHRD-216ENST00000486066 GOLGA8HP0CJ92 632 aa22.58■■□□□ 1.21
CHRD-216ENST00000486066 KCNA5P22460 613 aa22.58■■□□□ 1.21
CHRD-216ENST00000486066 HOXC8P31273 242 aa22.58■■□□□ 1.21
CHRD-216ENST00000486066 CHMP4BP1P59074 171 aa22.58■■□□□ 1.21
CHRD-216ENST00000486066 STXBP2Q15833 593 aa22.58■■□□□ 1.21
CHRD-216ENST00000486066 TOMM22Q9NS69 142 aa22.58■■□□□ 1.21
CHRD-216ENST00000486066 INSL6Q9Y581 213 aa22.58■■□□□ 1.21
CHRD-216ENST00000486066 POTEB3A0JP26 581 aa22.57■■□□□ 1.2
CHRD-216ENST00000486066 OPLAHO14841 1288 aa22.57■■□□□ 1.2
CHRD-216ENST00000486066 LGR5O75473 907 aa22.57■■□□□ 1.2
CHRD-216ENST00000486066 ZNF200P98182 395 aaPredicted RBP22.57■■□□□ 1.2
CHRD-216ENST00000486066 MFSD10Q14728 455 aa22.57■■□□□ 1.2
CHRD-216ENST00000486066 CDC37Q16543 378 aaPredicted RBP22.57■■□□□ 1.2
CHRD-216ENST00000486066 KIAA0753Q2KHM9 967 aa22.57■■□□□ 1.2
CHRD-216ENST00000486066 POTEBQ6S5H4 581 aa22.57■■□□□ 1.2
CHRD-216ENST00000486066 CHST3Q7LGC8 479 aa22.57■■□□□ 1.2
CHRD-216ENST00000486066 C7orf31Q8N865 590 aa22.57■■□□□ 1.2
CHRD-216ENST00000486066 MRPL38Q96DV4 380 aaKnown RBP22.57■■□□□ 1.2
CHRD-216ENST00000486066 RMDN3Q96TC7 470 aa22.57■■□□□ 1.2
CHRD-216ENST00000486066 KATNAL1Q9BW62 490 aa22.57■■□□□ 1.2
CHRD-216ENST00000486066 UBA5Q9GZZ9 404 aa22.57■■□□□ 1.2
CHRD-216ENST00000486066 EIF3JO75822 258 aaKnown RBP22.56■■□□□ 1.2
CHRD-216ENST00000486066 ZNF286BP0CG31 522 aa22.56■■□□□ 1.2
CHRD-216ENST00000486066 MCMDC2Q4G0Z9 681 aa22.56■■□□□ 1.2
CHRD-216ENST00000486066 PTCRAQ6ISU1 281 aaPredicted RBP22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms