RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 RIOX2Q8IUF8 465 aa6.73□□□□□ -1.33
GCFC2-209ENST00000486016 FAM26EQ8N5C1 309 aa6.73□□□□□ -1.33
GCFC2-209ENST00000486016 C11orf84Q9BUA3 381 aaPredicted RBP6.73□□□□□ -1.33
GCFC2-209ENST00000486016 CCSER2Q9H7U1 834 aa6.73□□□□□ -1.33
GCFC2-209ENST00000486016 X6R8D5 127 aa6.73□□□□□ -1.33
GCFC2-209ENST00000486016 ITGAVP06756 1048 aa6.72□□□□□ -1.33
GCFC2-209ENST00000486016 CYP2C8P10632 490 aa6.72□□□□□ -1.33
GCFC2-209ENST00000486016 ZXDAP98168 799 aa6.72□□□□□ -1.33
GCFC2-209ENST00000486016 E4F1Q66K89 784 aaPredicted RBP6.72□□□□□ -1.33
GCFC2-209ENST00000486016 ZNF227Q86WZ6 799 aa6.72□□□□□ -1.33
GCFC2-209ENST00000486016 BTN2A2Q8WVV5 523 aa6.72□□□□□ -1.33
GCFC2-209ENST00000486016 RBM15Q96T37 977 aaKnown RBP eCLIP6.72□□□□□ -1.33
GCFC2-209ENST00000486016 USP40Q9NVE5 1235 aa6.72□□□□□ -1.33
GCFC2-209ENST00000486016 NTMQ9P121 344 aa6.72□□□□□ -1.33
GCFC2-209ENST00000486016 B2RBV5 119 aa6.71□□□□□ -1.34
GCFC2-209ENST00000486016 K7ESM1 405 aa6.71□□□□□ -1.34
GCFC2-209ENST00000486016 FPR2P25090 351 aa6.71□□□□□ -1.34
GCFC2-209ENST00000486016 HOXC12P31275 282 aa6.71□□□□□ -1.34
GCFC2-209ENST00000486016 THBS2P35442 1172 aa6.71□□□□□ -1.34
GCFC2-209ENST00000486016 SMAD4Q13485 552 aaKnown RBP6.71□□□□□ -1.34
GCFC2-209ENST00000486016 SF1Q15637 639 aaKnown RBP6.71□□□□□ -1.34
GCFC2-209ENST00000486016 PRR31Q5SQ13 230 aa6.71□□□□□ -1.34
GCFC2-209ENST00000486016 UBXN11Q5T124 520 aa6.71□□□□□ -1.34
GCFC2-209ENST00000486016 MRM1Q6IN84 353 aaKnown RBP6.71□□□□□ -1.34
GCFC2-209ENST00000486016 IQCEQ6IPM2 695 aa6.71□□□□□ -1.34
GCFC2-209ENST00000486016 DENND5AQ6IQ26 1287 aa6.71□□□□□ -1.34
GCFC2-209ENST00000486016 ETV3LQ6ZN32 361 aa6.71□□□□□ -1.34
GCFC2-209ENST00000486016 FAM178BQ8IXR5 827 aa6.71□□□□□ -1.34
GCFC2-209ENST00000486016 MICAL1Q8TDZ2 1067 aa6.71□□□□□ -1.34
GCFC2-209ENST00000486016 ADAMTS17Q8TE56 1095 aa6.71□□□□□ -1.34
GCFC2-209ENST00000486016 DDX1Q92499 740 aaKnown RBP6.71□□□□□ -1.34
GCFC2-209ENST00000486016 SEC14L1Q92503 715 aa6.71□□□□□ -1.34
GCFC2-209ENST00000486016 PCDH18Q9HCL0 1135 aa6.71□□□□□ -1.34
GCFC2-209ENST00000486016 FBXL7Q9UJT9 491 aa6.71□□□□□ -1.34
GCFC2-209ENST00000486016 TIMM13Q9Y5L4 95 aaPredicted RBP6.71□□□□□ -1.34
GCFC2-209ENST00000486016 MRVI1Q9Y6F6 885 aa6.71□□□□□ -1.34
GCFC2-209ENST00000486016 RPL13P26373 211 aaKnown RBP6.7□□□□□ -1.34
GCFC2-209ENST00000486016 BCL6P41182 706 aa6.7□□□□□ -1.34
GCFC2-209ENST00000486016 ZNF827Q17R98 1081 aa6.7□□□□□ -1.34
GCFC2-209ENST00000486016 ACBD5Q5T8D3 534 aaPredicted RBP6.7□□□□□ -1.34
GCFC2-209ENST00000486016 MROH9Q5TGP6 573 aa6.7□□□□□ -1.34
GCFC2-209ENST00000486016 KYQ8NBH2 561 aa6.7□□□□□ -1.34
GCFC2-209ENST00000486016 C1orf159Q96HA4 380 aa6.7□□□□□ -1.34
GCFC2-209ENST00000486016 AP5M1Q9H0R1 490 aa6.7□□□□□ -1.34
GCFC2-209ENST00000486016 ACTR10Q9NZ32 417 aa6.7□□□□□ -1.34
GCFC2-209ENST00000486016 PRKAG3Q9UGI9 489 aa6.7□□□□□ -1.34
GCFC2-209ENST00000486016 OVOL3O00110 214 aa6.69□□□□□ -1.34
GCFC2-209ENST00000486016 SUSD5O60279 629 aa6.69□□□□□ -1.34
GCFC2-209ENST00000486016 ITGB3P05106 788 aa6.69□□□□□ -1.34
GCFC2-209ENST00000486016 CNR2P34972 360 aa6.69□□□□□ -1.34
GCFC2-209ENST00000486016 ETFBP38117 255 aa6.69□□□□□ -1.34
GCFC2-209ENST00000486016 GJA9P57773 515 aa6.69□□□□□ -1.34
GCFC2-209ENST00000486016 RPL11P62913 178 aaKnown RBP6.69□□□□□ -1.34
GCFC2-209ENST00000486016 CR1LQ2VPA4 569 aa6.69□□□□□ -1.34
GCFC2-209ENST00000486016 TTLL7Q6ZT98 887 aa6.69□□□□□ -1.34
GCFC2-209ENST00000486016 FAM126BQ8IXS8 530 aa6.69□□□□□ -1.34
GCFC2-209ENST00000486016 RCBTB1Q8NDN9 531 aa6.69□□□□□ -1.34
GCFC2-209ENST00000486016 DIO2Q92813 273 aa6.69□□□□□ -1.34
GCFC2-209ENST00000486016 BTG4Q9NY30 223 aa6.69□□□□□ -1.34
GCFC2-209ENST00000486016 TNFRSF1AP19438 455 aa6.68□□□□□ -1.34
GCFC2-209ENST00000486016 GFRA1P56159 465 aa6.68□□□□□ -1.34
GCFC2-209ENST00000486016 ITGA1P56199 1179 aa6.68□□□□□ -1.34
GCFC2-209ENST00000486016 KCNAB2Q13303 367 aa6.68□□□□□ -1.34
GCFC2-209ENST00000486016 PRSS53Q2L4Q9 553 aa6.68□□□□□ -1.34
GCFC2-209ENST00000486016 TNNI3KQ59H18 835 aa6.68□□□□□ -1.34
GCFC2-209ENST00000486016 CEP68Q76N32 757 aa6.68□□□□□ -1.34
GCFC2-209ENST00000486016 PPP1R14AQ96A00 147 aa6.68□□□□□ -1.34
GCFC2-209ENST00000486016 SMARCA5O60264 1052 aaPredicted RBP6.67□□□□□ -1.34
GCFC2-209ENST00000486016 SV2CQ496J9 727 aa6.67□□□□□ -1.34
GCFC2-209ENST00000486016 SLC35F1Q5T1Q4 408 aa6.67□□□□□ -1.34
GCFC2-209ENST00000486016 CD300LDQ6UXZ3 194 aa6.67□□□□□ -1.34
GCFC2-209ENST00000486016 MILR1Q7Z6M3 343 aa6.67□□□□□ -1.34
GCFC2-209ENST00000486016 CCDC140Q96MF4 163 aa6.67□□□□□ -1.34
GCFC2-209ENST00000486016 CDIP1Q9H305 208 aa6.67□□□□□ -1.34
GCFC2-209ENST00000486016 NPFFR2Q9Y5X5 522 aa6.67□□□□□ -1.34
GCFC2-209ENST00000486016 MEFVO15553 781 aaPredicted RBP6.66□□□□□ -1.34
GCFC2-209ENST00000486016 TADA3O75528 432 aa6.66□□□□□ -1.34
GCFC2-209ENST00000486016 CPP00450 1065 aa6.66□□□□□ -1.34
GCFC2-209ENST00000486016 FSHBP01225 129 aa6.66□□□□□ -1.34
GCFC2-209ENST00000486016 SNRPB2P08579 225 aaKnown RBP6.66□□□□□ -1.34
GCFC2-209ENST00000486016 FGRP09769 529 aa6.66□□□□□ -1.34
GCFC2-209ENST00000486016 LCP1P13796 627 aa6.66□□□□□ -1.34
GCFC2-209ENST00000486016 ECI1P42126 302 aa6.66□□□□□ -1.34
GCFC2-209ENST00000486016 STAT5AP42229 794 aa6.66□□□□□ -1.34
GCFC2-209ENST00000486016 MAGEA10P43363 369 aaPredicted RBP6.66□□□□□ -1.34
GCFC2-209ENST00000486016 GTF2A2P52657 109 aa6.66□□□□□ -1.34
GCFC2-209ENST00000486016 ADAM9Q13443 819 aa6.66□□□□□ -1.34
GCFC2-209ENST00000486016 FAM26FQ5R3K3 315 aa6.66□□□□□ -1.34
GCFC2-209ENST00000486016 LARP1BQ659C4 914 aaKnown RBP6.66□□□□□ -1.34
GCFC2-209ENST00000486016 STK32CQ86UX6 486 aa6.66□□□□□ -1.34
GCFC2-209ENST00000486016 TTLL6Q8N841 843 aa6.66□□□□□ -1.34
GCFC2-209ENST00000486016 SLC16A11Q8NCK7 471 aa6.66□□□□□ -1.34
GCFC2-209ENST00000486016 TRMT2BQ96GJ1 504 aaKnown RBP6.66□□□□□ -1.34
GCFC2-209ENST00000486016 SSBP3Q9BWW4 388 aaPredicted RBP6.66□□□□□ -1.34
GCFC2-209ENST00000486016 KRTAP3-1Q9BYR8 98 aa6.66□□□□□ -1.34
GCFC2-209ENST00000486016 CAPN10Q9HC96 672 aa6.66□□□□□ -1.34
GCFC2-209ENST00000486016 SRRDQ9UH36 339 aa6.66□□□□□ -1.34
GCFC2-209ENST00000486016 ZNF652Q9Y2D9 606 aa6.66□□□□□ -1.34
GCFC2-209ENST00000486016 H7BY64 318 aa6.65□□□□□ -1.34
GCFC2-209ENST00000486016 LTBRP36941 435 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms