RNA–Protein interactions for RNA: ENST00000485938.3

CLN5-202, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 2

Gene CLN5, Length 2,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-202ENST00000485938 PDXDC1Q6P996 788 aa24.94■■□□□ 1.58
CLN5-202ENST00000485938 EMBQ6PCB8 327 aa24.94■■□□□ 1.58
CLN5-202ENST00000485938 USP17L2Q6R6M4 530 aa24.94■■□□□ 1.58
CLN5-202ENST00000485938 SMIM5Q71RC9 77 aa24.94■■□□□ 1.58
CLN5-202ENST00000485938 DYMQ7RTS9 669 aa24.94■■□□□ 1.58
CLN5-202ENST00000485938 GPIHBP1Q8IV16 184 aa24.94■■□□□ 1.58
CLN5-202ENST00000485938 REXO1Q8N1G1 1221 aaKnown RBP24.94■■□□□ 1.58
CLN5-202ENST00000485938 LARP4BQ92615 738 aaKnown RBP24.94■■□□□ 1.58
CLN5-202ENST00000485938 GOLGA8KD6RF30 607 aa24.93■■□□□ 1.58
CLN5-202ENST00000485938 RGL2O15211 777 aa24.93■■□□□ 1.58
CLN5-202ENST00000485938 TNFRSF8P28908 595 aa24.93■■□□□ 1.58
CLN5-202ENST00000485938 FXR2P51116 673 aaKnown RBP eCLIP24.93■■□□□ 1.58
CLN5-202ENST00000485938 MAPKAPK5Q8IW41 473 aa24.93■■□□□ 1.58
CLN5-202ENST00000485938 EFCC1Q9HA90 598 aa24.93■■□□□ 1.58
CLN5-202ENST00000485938 SEC63Q9UGP8 760 aaKnown RBP24.93■■□□□ 1.58
CLN5-202ENST00000485938 NOP2P46087 812 aaKnown RBP24.92■■□□□ 1.58
CLN5-202ENST00000485938 GSTO1P78417 241 aa24.92■■□□□ 1.58
CLN5-202ENST00000485938 ANKRD13CQ8N6S4 541 aa24.92■■□□□ 1.58
CLN5-202ENST00000485938 MTMR8Q96EF0 704 aa24.92■■□□□ 1.58
CLN5-202ENST00000485938 EDEM3Q9BZQ6 932 aa24.92■■□□□ 1.58
CLN5-202ENST00000485938 TMEM260Q9NX78 707 aa24.92■■□□□ 1.58
CLN5-202ENST00000485938 NRAPQ86VF7 1730 aa24.92■■□□□ 1.58
CLN5-202ENST00000485938 SMARCA1P28370 1054 aa24.92■■□□□ 1.58
CLN5-202ENST00000485938 ATP2B2Q01814 1243 aa24.92■■□□□ 1.58
CLN5-202ENST00000485938 GFPT1Q06210 699 aaPredicted RBP24.92■■□□□ 1.58
CLN5-202ENST00000485938 CALCRLQ16602 461 aa24.92■■□□□ 1.58
CLN5-202ENST00000485938 TSEN2Q8NCE0 465 aaKnown RBP24.92■■□□□ 1.58
CLN5-202ENST00000485938 CAVIN3Q969G5 261 aa24.92■■□□□ 1.58
CLN5-202ENST00000485938 PIGSQ96S52 555 aa24.92■■□□□ 1.58
CLN5-202ENST00000485938 EYA3Q99504 573 aa24.92■■□□□ 1.58
CLN5-202ENST00000485938 ESYT2A0FGR8 921 aa24.91■■□□□ 1.58
CLN5-202ENST00000485938 PAFAH1B1P43034 410 aa24.91■■□□□ 1.58
CLN5-202ENST00000485938 HGSNATQ68CP4 663 aa24.91■■□□□ 1.58
CLN5-202ENST00000485938 GBP6Q6ZN66 633 aa24.91■■□□□ 1.58
CLN5-202ENST00000485938 NBPF5PQ86XG9 351 aaPredicted RBP24.91■■□□□ 1.58
CLN5-202ENST00000485938 CCDC24Q8N4L8 307 aa24.91■■□□□ 1.58
CLN5-202ENST00000485938 CCDC155Q8N6L0 562 aa24.91■■□□□ 1.58
CLN5-202ENST00000485938 PPM1EQ8WY54 764 aa24.91■■□□□ 1.58
CLN5-202ENST00000485938 VAT1LQ9HCJ6 419 aa24.91■■□□□ 1.58
CLN5-202ENST00000485938 RBM12Q9NTZ6 932 aaKnown RBP24.91■■□□□ 1.58
CLN5-202ENST00000485938 SSU72P8A0A1W2PR75 194 aa24.91■■□□□ 1.58
CLN5-202ENST00000485938 OPA1O60313 960 aa24.91■■□□□ 1.58
CLN5-202ENST00000485938 EPB41P11171 864 aaKnown RBP24.91■■□□□ 1.58
CLN5-202ENST00000485938 TM4SF1P30408 202 aa24.91■■□□□ 1.58
CLN5-202ENST00000485938 SLC1A4P43007 532 aa24.91■■□□□ 1.58
CLN5-202ENST00000485938 CDK8P49336 464 aa24.91■■□□□ 1.58
CLN5-202ENST00000485938 RASSF7Q02833 373 aa24.91■■□□□ 1.58
CLN5-202ENST00000485938 EHHADHQ08426 723 aa24.91■■□□□ 1.58
CLN5-202ENST00000485938 KLHDC7AQ5VTJ3 777 aa24.91■■□□□ 1.58
CLN5-202ENST00000485938 ALS2CLQ60I27 953 aa24.91■■□□□ 1.58
CLN5-202ENST00000485938 PACS2Q86VP3 889 aa24.91■■□□□ 1.58
CLN5-202ENST00000485938 NEDD1Q8NHV4 660 aa24.91■■□□□ 1.58
CLN5-202ENST00000485938 NOX5Q96PH1 765 aa24.91■■□□□ 1.58
CLN5-202ENST00000485938 CAPS2Q9BXY5 557 aa24.91■■□□□ 1.58
CLN5-202ENST00000485938 ZNF287Q9HBT7 754 aa24.91■■□□□ 1.58
CLN5-202ENST00000485938 EFCAB13Q8IY85 973 aa24.9■■□□□ 1.58
CLN5-202ENST00000485938 RNF10Q8N5U6 811 aaKnown RBP24.9■■□□□ 1.58
CLN5-202ENST00000485938 RAD54LQ92698 747 aa24.9■■□□□ 1.58
CLN5-202ENST00000485938 CDK5RAP3Q96JB5 506 aa24.9■■□□□ 1.58
CLN5-202ENST00000485938 SETDB2Q96T68 719 aa24.9■■□□□ 1.58
CLN5-202ENST00000485938 RBAK-RBAKDNI3L0D1 243 aa24.9■■□□□ 1.58
CLN5-202ENST00000485938 SLC37A4O43826 429 aa24.9■■□□□ 1.58
CLN5-202ENST00000485938 KCNQ4P56696 695 aa24.9■■□□□ 1.58
CLN5-202ENST00000485938 TTC31Q49AM3 519 aaPredicted RBP24.9■■□□□ 1.58
CLN5-202ENST00000485938 C8orf74Q6P047 294 aa24.9■■□□□ 1.58
CLN5-202ENST00000485938 C16orf86Q6ZW13 317 aa24.9■■□□□ 1.58
CLN5-202ENST00000485938 GRIN2DO15399 1336 aa24.9■■□□□ 1.58
CLN5-202ENST00000485938 SBF2Q86WG5 1849 aa24.9■■□□□ 1.58
CLN5-202ENST00000485938 ERCC3P19447 782 aa24.89■■□□□ 1.58
CLN5-202ENST00000485938 KCNMA1Q12791 1236 aa24.89■■□□□ 1.58
CLN5-202ENST00000485938 GLE1Q53GS7 698 aaKnown RBP24.89■■□□□ 1.58
CLN5-202ENST00000485938 FOXR2Q6PJQ5 311 aa24.89■■□□□ 1.58
CLN5-202ENST00000485938 CACNA2D4Q7Z3S7 1137 aa24.89■■□□□ 1.58
CLN5-202ENST00000485938 GLIS3Q8NEA6 775 aa24.89■■□□□ 1.58
CLN5-202ENST00000485938 DDX60LQ5H9U9 1706 aaKnown RBP24.89■■□□□ 1.57
CLN5-202ENST00000485938 ZNF831Q5JPB2 1677 aa24.89■■□□□ 1.57
CLN5-202ENST00000485938 EDIL3O43854 480 aa24.89■■□□□ 1.57
CLN5-202ENST00000485938 SKIDA1Q1XH10 827 aa24.89■■□□□ 1.57
CLN5-202ENST00000485938 TMEM266Q2M3C6 531 aa24.89■■□□□ 1.57
CLN5-202ENST00000485938 ARHGAP27Q6ZUM4 889 aa24.89■■□□□ 1.57
CLN5-202ENST00000485938 EHD4Q9H223 541 aa24.89■■□□□ 1.57
CLN5-202ENST00000485938 RIC8AQ9NPQ8 531 aa24.89■■□□□ 1.57
CLN5-202ENST00000485938 TSKSQ9UJT2 592 aa24.89■■□□□ 1.57
CLN5-202ENST00000485938 COL24A1Q17RW2 1714 aa24.88■■□□□ 1.57
CLN5-202ENST00000485938 BUB1O43683 1085 aa24.88■■□□□ 1.57
CLN5-202ENST00000485938 HOXA7P31268 230 aaPredicted RBP24.88■■□□□ 1.57
CLN5-202ENST00000485938 PSMD2Q13200 908 aa24.88■■□□□ 1.57
CLN5-202ENST00000485938 LRRC41Q15345 812 aa24.88■■□□□ 1.57
CLN5-202ENST00000485938 DDX12PQ92771 950 aa24.88■■□□□ 1.57
CLN5-202ENST00000485938 NUDT12Q9BQG2 462 aa24.88■■□□□ 1.57
CLN5-202ENST00000485938 RTFDC1Q9BY42 306 aaPredicted RBP24.88■■□□□ 1.57
CLN5-202ENST00000485938 POTEMA6NI47 508 aa24.87■■□□□ 1.57
CLN5-202ENST00000485938 EIF3HO15372 352 aaKnown RBP eCLIP24.87■■□□□ 1.57
CLN5-202ENST00000485938 TDP2O95551 362 aa24.87■■□□□ 1.57
CLN5-202ENST00000485938 CCT5P48643 541 aa24.87■■□□□ 1.57
CLN5-202ENST00000485938 NNTQ13423 1086 aa24.87■■□□□ 1.57
CLN5-202ENST00000485938 PDIA5Q14554 519 aa24.87■■□□□ 1.57
CLN5-202ENST00000485938 TTMPQ5BVD1 217 aa24.87■■□□□ 1.57
CLN5-202ENST00000485938 KCNK18Q7Z418 384 aa24.87■■□□□ 1.57
CLN5-202ENST00000485938 PROM2Q8N271 834 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms