RNA–Protein interactions for RNA: ENST00000485901.1

HLA-DOA-204, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-204ENST00000485901 SLC28A3Q9HAS3 691 aa13.87□□□□□ -0.19
HLA-DOA-204ENST00000485901 ZSWIM6Q9HCJ5 1215 aa13.87□□□□□ -0.19
HLA-DOA-204ENST00000485901 VTA1Q9NP79 307 aa13.87□□□□□ -0.19
HLA-DOA-204ENST00000485901 RBM28Q9NW13 759 aaKnown RBP13.87□□□□□ -0.19
HLA-DOA-204ENST00000485901 ADD3Q9UEY8 706 aaKnown RBP13.87□□□□□ -0.19
HLA-DOA-204ENST00000485901 BRPF3Q9ULD4 1205 aa13.87□□□□□ -0.19
HLA-DOA-204ENST00000485901 PCDHA1Q9Y5I3 950 aa13.87□□□□□ -0.19
HLA-DOA-204ENST00000485901 CYP46A1Q9Y6A2 500 aa13.87□□□□□ -0.19
HLA-DOA-204ENST00000485901 TRANK1O15050 2925 aa13.86□□□□□ -0.19
HLA-DOA-204ENST00000485901 KLF18A0A0U1RQI7 1052 aa13.86□□□□□ -0.19
HLA-DOA-204ENST00000485901 SOWAHBA6NEL2 793 aa13.86□□□□□ -0.19
HLA-DOA-204ENST00000485901 RXRAP19793 462 aa13.86□□□□□ -0.19
HLA-DOA-204ENST00000485901 RCAN1P53805 252 aa13.86□□□□□ -0.19
HLA-DOA-204ENST00000485901 ANAPC15P60006 121 aa13.86□□□□□ -0.19
HLA-DOA-204ENST00000485901 PPP2R5BQ15173 497 aa13.86□□□□□ -0.19
HLA-DOA-204ENST00000485901 SLC35G1Q2M3R5 365 aa13.86□□□□□ -0.19
HLA-DOA-204ENST00000485901 TLK2Q86UE8 772 aa13.86□□□□□ -0.19
HLA-DOA-204ENST00000485901 MICU3Q86XE3 530 aa13.86□□□□□ -0.19
HLA-DOA-204ENST00000485901 SRBD1Q8N5C6 995 aaKnown RBP13.86□□□□□ -0.19
HLA-DOA-204ENST00000485901 SAMD3Q8N6K7 520 aa13.86□□□□□ -0.19
HLA-DOA-204ENST00000485901 USP38Q8NB14 1042 aa13.86□□□□□ -0.19
HLA-DOA-204ENST00000485901 PCDHA11Q9Y5I1 949 aa13.86□□□□□ -0.19
HLA-DOA-204ENST00000485901 GBF1Q92538 1859 aa13.85□□□□□ -0.19
HLA-DOA-204ENST00000485901 B4DLN1 442 aa13.85□□□□□ -0.19
HLA-DOA-204ENST00000485901 CALML3P27482 149 aa13.85□□□□□ -0.19
HLA-DOA-204ENST00000485901 MRPL12P52815 198 aaKnown RBP13.85□□□□□ -0.19
HLA-DOA-204ENST00000485901 RPS6P62753 249 aaKnown RBP13.85□□□□□ -0.19
HLA-DOA-204ENST00000485901 RTN1Q16799 776 aa13.85□□□□□ -0.19
HLA-DOA-204ENST00000485901 AAK1Q2M2I8 961 aa13.85□□□□□ -0.19
HLA-DOA-204ENST00000485901 RAB11FIP4Q86YS3 637 aa13.85□□□□□ -0.19
HLA-DOA-204ENST00000485901 BRF1Q92994 677 aa13.85□□□□□ -0.19
HLA-DOA-204ENST00000485901 MPHOSPH6Q99547 160 aaKnown RBP13.85□□□□□ -0.19
HLA-DOA-204ENST00000485901 AGXT2Q9BYV1 514 aa13.85□□□□□ -0.19
HLA-DOA-204ENST00000485901 PPP1R12CQ9BZL4 782 aa13.85□□□□□ -0.19
HLA-DOA-204ENST00000485901 POLR3EQ9NVU0 708 aa13.85□□□□□ -0.19
HLA-DOA-204ENST00000485901 MAP3K20Q9NYL2 800 aaKnown RBP13.85□□□□□ -0.19
HLA-DOA-204ENST00000485901 SEC63Q9UGP8 760 aaKnown RBP13.85□□□□□ -0.19
HLA-DOA-204ENST00000485901 NAP1L2Q9ULW6 460 aaPredicted RBP13.85□□□□□ -0.19
HLA-DOA-204ENST00000485901 CCDC196A0A1B0GTZ2 297 aa13.84□□□□□ -0.19
HLA-DOA-204ENST00000485901 NKRFO15226 690 aaKnown RBP eCLIP13.84□□□□□ -0.19
HLA-DOA-204ENST00000485901 KPNA6O60684 536 aa13.84□□□□□ -0.19
HLA-DOA-204ENST00000485901 PPP1R11O60927 126 aaPredicted RBP13.84□□□□□ -0.19
HLA-DOA-204ENST00000485901 PLEKHA8P1O95397 391 aa13.84□□□□□ -0.19
HLA-DOA-204ENST00000485901 CYP2C18P33260 490 aa13.84□□□□□ -0.19
HLA-DOA-204ENST00000485901 RFC2P35250 354 aa13.84□□□□□ -0.19
HLA-DOA-204ENST00000485901 APOBRQ0VD83 1088 aa13.84□□□□□ -0.19
HLA-DOA-204ENST00000485901 DUSP28Q4G0W2 176 aa13.84□□□□□ -0.19
HLA-DOA-204ENST00000485901 BRDTQ58F21 947 aaPredicted RBP13.84□□□□□ -0.19
HLA-DOA-204ENST00000485901 TAPT1Q6NXT6 567 aa13.84□□□□□ -0.19
HLA-DOA-204ENST00000485901 CXCL17Q6UXB2 119 aa13.84□□□□□ -0.19
HLA-DOA-204ENST00000485901 TMTC3Q6ZXV5 915 aa13.84□□□□□ -0.19
HLA-DOA-204ENST00000485901 NOL8Q76FK4 1167 aaKnown RBP13.84□□□□□ -0.19
HLA-DOA-204ENST00000485901 CCDC82Q8N4S0 544 aa13.84□□□□□ -0.19
HLA-DOA-204ENST00000485901 DNERQ8NFT8 737 aa13.84□□□□□ -0.19
HLA-DOA-204ENST00000485901 PHOSPHO2Q8TCD6 241 aa13.84□□□□□ -0.19
HLA-DOA-204ENST00000485901 PIBF1Q8WXW3 757 aa13.84□□□□□ -0.19
HLA-DOA-204ENST00000485901 TBC1D5Q92609 795 aa13.84□□□□□ -0.19
HLA-DOA-204ENST00000485901 NOC4LQ9BVI4 516 aaKnown RBP13.84□□□□□ -0.19
HLA-DOA-204ENST00000485901 PRDM12Q9H4Q4 367 aa13.84□□□□□ -0.19
HLA-DOA-204ENST00000485901 CXXC1Q9P0U4 656 aaPredicted RBP13.84□□□□□ -0.19
HLA-DOA-204ENST00000485901 SLC4A7Q9Y6M7 1214 aa13.84□□□□□ -0.19
HLA-DOA-204ENST00000485901 ASTN1O14525 1302 aa13.84□□□□□ -0.19
HLA-DOA-204ENST00000485901 SCN10AQ9Y5Y9 1956 aa13.83□□□□□ -0.19
HLA-DOA-204ENST00000485901 RBM47A0AV96 593 aaKnown RBP13.83□□□□□ -0.2
HLA-DOA-204ENST00000485901 GOLGA8AA7E2F4 631 aa13.83□□□□□ -0.2
HLA-DOA-204ENST00000485901 GOLGA8BA8MQT2 603 aa13.83□□□□□ -0.2
HLA-DOA-204ENST00000485901 DYNC1LI2O43237 492 aaPredicted RBP13.83□□□□□ -0.2
HLA-DOA-204ENST00000485901 SEC24BO95487 1268 aa13.83□□□□□ -0.2
HLA-DOA-204ENST00000485901 CFBP00751 764 aa13.83□□□□□ -0.2
HLA-DOA-204ENST00000485901 ACRP10323 421 aa13.83□□□□□ -0.2
HLA-DOA-204ENST00000485901 SMPD1P17405 629 aa13.83□□□□□ -0.2
HLA-DOA-204ENST00000485901 PBX2P40425 430 aa13.83□□□□□ -0.2
HLA-DOA-204ENST00000485901 CPT1AP50416 773 aa13.83□□□□□ -0.2
HLA-DOA-204ENST00000485901 METAP2P50579 478 aaKnown RBP eCLIP13.83□□□□□ -0.2
HLA-DOA-204ENST00000485901 SLC30A10Q6XR72 485 aa13.83□□□□□ -0.2
HLA-DOA-204ENST00000485901 CMTR1Q8N1G2 835 aaKnown RBP13.83□□□□□ -0.2
HLA-DOA-204ENST00000485901 IL27Q8NEV9 243 aa13.83□□□□□ -0.2
HLA-DOA-204ENST00000485901 PURBQ96QR8 312 aaKnown RBP13.83□□□□□ -0.2
HLA-DOA-204ENST00000485901 PDRG1Q9NUG6 133 aa13.83□□□□□ -0.2
HLA-DOA-204ENST00000485901 GRIN2DO15399 1336 aa13.83□□□□□ -0.2
HLA-DOA-204ENST00000485901 PRRC2BQ5JSZ5 2229 aaKnown RBP13.83□□□□□ -0.2
HLA-DOA-204ENST00000485901 LRRC37A2A6NM11 1700 aa13.82□□□□□ -0.2
HLA-DOA-204ENST00000485901 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.82□□□□□ -0.2
HLA-DOA-204ENST00000485901 GRXCR1A8MXD5 290 aa13.82□□□□□ -0.2
HLA-DOA-204ENST00000485901 B4GALT4O60513 344 aa13.82□□□□□ -0.2
HLA-DOA-204ENST00000485901 ALDH5A1P51649 535 aaPredicted RBP13.82□□□□□ -0.2
HLA-DOA-204ENST00000485901 EVCP57679 992 aa13.82□□□□□ -0.2
HLA-DOA-204ENST00000485901 BEX3Q00994 111 aa13.82□□□□□ -0.2
HLA-DOA-204ENST00000485901 PTPN11Q06124 597 aaPredicted RBP13.82□□□□□ -0.2
HLA-DOA-204ENST00000485901 ADGRE1Q14246 886 aa13.82□□□□□ -0.2
HLA-DOA-204ENST00000485901 SYTL5Q8TDW5 730 aaPredicted RBP13.82□□□□□ -0.2
HLA-DOA-204ENST00000485901 NSUN6Q8TEA1 469 aaKnown RBP13.82□□□□□ -0.2
HLA-DOA-204ENST00000485901 UPF3BQ9BZI7 483 aaKnown RBP13.82□□□□□ -0.2
HLA-DOA-204ENST00000485901 ALDH8A1Q9H2A2 487 aaPredicted RBP13.82□□□□□ -0.2
HLA-DOA-204ENST00000485901 ARIH1Q9Y4X5 557 aaPredicted RBP13.82□□□□□ -0.2
HLA-DOA-204ENST00000485901 GCOM1H8Y6P7 765 aaPredicted RBP13.81□□□□□ -0.2
HLA-DOA-204ENST00000485901 PITPNM1O00562 1244 aa13.81□□□□□ -0.2
HLA-DOA-204ENST00000485901 POLR2MP0CAP2 368 aa13.81□□□□□ -0.2
HLA-DOA-204ENST00000485901 ACTN1P12814 892 aa13.81□□□□□ -0.2
HLA-DOA-204ENST00000485901 COL9A1P20849 921 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms