RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 DEFB128Q7Z7B8 93 aa19.92■□□□□ 0.78
SMC4-216ENST00000485645 HOMER1Q86YM7 354 aa19.92■□□□□ 0.78
SMC4-216ENST00000485645 SAMD3Q8N6K7 520 aa19.92■□□□□ 0.78
SMC4-216ENST00000485645 RETREG2Q8NC44 543 aa19.92■□□□□ 0.78
SMC4-216ENST00000485645 VWCEQ96DN2 955 aa19.92■□□□□ 0.78
SMC4-216ENST00000485645 DDX41Q9UJV9 622 aaKnown RBP19.92■□□□□ 0.78
SMC4-216ENST00000485645 MRVI1Q9Y6F6 885 aa19.92■□□□□ 0.78
SMC4-216ENST00000485645 PRUNE2Q8WUY3 3088 aa19.92■□□□□ 0.78
SMC4-216ENST00000485645 PITPNM1O00562 1244 aa19.91■□□□□ 0.78
SMC4-216ENST00000485645 RFC2P35250 354 aa19.91■□□□□ 0.78
SMC4-216ENST00000485645 WTAPQ15007 396 aa19.91■□□□□ 0.78
SMC4-216ENST00000485645 NKX2-4Q9H2Z4 354 aa19.91■□□□□ 0.78
SMC4-216ENST00000485645 RIOX1Q9H6W3 641 aa19.91■□□□□ 0.78
SMC4-216ENST00000485645 SLC28A3Q9HAS3 691 aa19.91■□□□□ 0.78
SMC4-216ENST00000485645 IQCF3P0C7M6 154 aa19.9■□□□□ 0.78
SMC4-216ENST00000485645 MYCLP12524 364 aaPredicted RBP19.9■□□□□ 0.78
SMC4-216ENST00000485645 ACTN1P12814 892 aa19.9■□□□□ 0.78
SMC4-216ENST00000485645 BFSP2Q13515 415 aa19.9■□□□□ 0.78
SMC4-216ENST00000485645 DGKDQ16760 1214 aa19.9■□□□□ 0.78
SMC4-216ENST00000485645 STOX1Q6ZVD7 989 aa19.9■□□□□ 0.78
SMC4-216ENST00000485645 EMID1Q96A84 441 aaPredicted RBP19.9■□□□□ 0.78
SMC4-216ENST00000485645 PIGSQ96S52 555 aa19.9■□□□□ 0.78
SMC4-216ENST00000485645 PDCD2LQ9BRP1 358 aa19.9■□□□□ 0.78
SMC4-216ENST00000485645 PRDM12Q9H4Q4 367 aa19.9■□□□□ 0.78
SMC4-216ENST00000485645 YBX2Q9Y2T7 364 aaKnown RBP19.9■□□□□ 0.78
SMC4-216ENST00000485645 BAZ2BQ9UIF8 2168 aaKnown RBP19.9■□□□□ 0.78
SMC4-216ENST00000485645 ATP2A2P16615 1042 aaKnown RBP19.89■□□□□ 0.77
SMC4-216ENST00000485645 HOXA13P31271 388 aaPredicted RBP19.89■□□□□ 0.77
SMC4-216ENST00000485645 LAMC2Q13753 1193 aa19.89■□□□□ 0.77
SMC4-216ENST00000485645 SCN5AQ14524 2016 aa19.89■□□□□ 0.77
SMC4-216ENST00000485645 PTGISQ16647 500 aa19.89■□□□□ 0.77
SMC4-216ENST00000485645 CATIPQ7Z7H3 387 aa19.89■□□□□ 0.77
SMC4-216ENST00000485645 SESTD1Q86VW0 696 aa19.89■□□□□ 0.77
SMC4-216ENST00000485645 KAT2BQ92831 832 aa19.89■□□□□ 0.77
SMC4-216ENST00000485645 MAP4K1Q92918 833 aa19.89■□□□□ 0.77
SMC4-216ENST00000485645 SENP2Q9HC62 589 aa19.89■□□□□ 0.77
SMC4-216ENST00000485645 TAF6LQ9Y6J9 622 aa19.89■□□□□ 0.77
SMC4-216ENST00000485645 GBF1Q92538 1859 aa19.88■□□□□ 0.77
SMC4-216ENST00000485645 PNMA6FA0A0J9YX94 578 aa19.88■□□□□ 0.77
SMC4-216ENST00000485645 GCOM1H8Y6P7 765 aaPredicted RBP19.88■□□□□ 0.77
SMC4-216ENST00000485645 POLR2MP0CAP2 368 aa19.88■□□□□ 0.77
SMC4-216ENST00000485645 RABGGTBP53611 331 aa19.88■□□□□ 0.77
SMC4-216ENST00000485645 TROAPQ12815 778 aa19.88■□□□□ 0.77
SMC4-216ENST00000485645 SLC35G1Q2M3R5 365 aa19.88■□□□□ 0.77
SMC4-216ENST00000485645 TMEM67Q5HYA8 995 aa19.88■□□□□ 0.77
SMC4-216ENST00000485645 KCNV1Q6PIU1 500 aa19.88■□□□□ 0.77
SMC4-216ENST00000485645 DHX37Q8IY37 1157 aaKnown RBP19.88■□□□□ 0.77
SMC4-216ENST00000485645 CCDC155Q8N6L0 562 aa19.88■□□□□ 0.77
SMC4-216ENST00000485645 PCDHA11Q9Y5I1 949 aa19.88■□□□□ 0.77
SMC4-216ENST00000485645 MYH7BA7E2Y1 1941 aa19.87■□□□□ 0.77
SMC4-216ENST00000485645 CYTH3O43739 400 aa19.87■□□□□ 0.77
SMC4-216ENST00000485645 PGM5Q15124 567 aa19.87■□□□□ 0.77
SMC4-216ENST00000485645 GDF6Q6KF10 455 aaPredicted RBP19.87■□□□□ 0.77
SMC4-216ENST00000485645 VSIG10LQ86VR7 867 aa19.87■□□□□ 0.77
SMC4-216ENST00000485645 USP38Q8NB14 1042 aa19.87■□□□□ 0.77
SMC4-216ENST00000485645 PPTC7Q8NI37 304 aa19.87■□□□□ 0.77
SMC4-216ENST00000485645 CAGE1Q8TC20 777 aa19.87■□□□□ 0.77
SMC4-216ENST00000485645 IGDCC4Q8TDY8 1250 aa19.87■□□□□ 0.77
SMC4-216ENST00000485645 KATNAL1Q9BW62 490 aa19.87■□□□□ 0.77
SMC4-216ENST00000485645 FTOQ9C0B1 505 aaKnown RBP eCLIP19.87■□□□□ 0.77
SMC4-216ENST00000485645 TRIP12Q14669 1992 aaPredicted RBP19.86■□□□□ 0.77
SMC4-216ENST00000485645 RGS20O76081 388 aa19.86■□□□□ 0.77
SMC4-216ENST00000485645 CCND2P30279 289 aa19.86■□□□□ 0.77
SMC4-216ENST00000485645 PSEN2P49810 448 aa19.86■□□□□ 0.77
SMC4-216ENST00000485645 ANTXR2P58335 489 aa19.86■□□□□ 0.77
SMC4-216ENST00000485645 PPP2R2DQ66LE6 453 aa19.86■□□□□ 0.77
SMC4-216ENST00000485645 FCHSD1Q86WN1 690 aa19.86■□□□□ 0.77
SMC4-216ENST00000485645 MB21D2Q8IYB1 491 aaPredicted RBP19.86■□□□□ 0.77
SMC4-216ENST00000485645 C7orf31Q8N865 590 aa19.86■□□□□ 0.77
SMC4-216ENST00000485645 PPM1EQ8WY54 764 aa19.86■□□□□ 0.77
SMC4-216ENST00000485645 GTF2IRD1Q9UHL9 959 aa19.86■□□□□ 0.77
SMC4-216ENST00000485645 RBM8AQ9Y5S9 174 aaKnown RBP19.86■□□□□ 0.77
SMC4-216ENST00000485645 CHD9Q3L8U1 2897 aa19.85■□□□□ 0.77
SMC4-216ENST00000485645 VCANP13611 3396 aa19.85■□□□□ 0.77
SMC4-216ENST00000485645 TGFB3P10600 412 aa19.85■□□□□ 0.77
SMC4-216ENST00000485645 MYOGP15173 224 aa19.85■□□□□ 0.77
SMC4-216ENST00000485645 IGFBP4P22692 258 aa19.85■□□□□ 0.77
SMC4-216ENST00000485645 MYSM1Q5VVJ2 828 aa19.85■□□□□ 0.77
SMC4-216ENST00000485645 IL31RAQ8NI17 732 aa19.85■□□□□ 0.77
SMC4-216ENST00000485645 AFAP1L1Q8TED9 768 aa19.85■□□□□ 0.77
SMC4-216ENST00000485645 ALG1Q9BT22 464 aa19.85■□□□□ 0.77
SMC4-216ENST00000485645 HDAC6Q9UBN7 1215 aa19.85■□□□□ 0.77
SMC4-216ENST00000485645 TANC1Q9C0D5 1861 aa19.84■□□□□ 0.77
SMC4-216ENST00000485645 PPFIA4O75335 1185 aa19.84■□□□□ 0.77
SMC4-216ENST00000485645 GGPS1O95749 300 aa19.84■□□□□ 0.77
SMC4-216ENST00000485645 F2P00734 622 aa19.84■□□□□ 0.77
SMC4-216ENST00000485645 ZNF286BP0CG31 522 aa19.84■□□□□ 0.77
SMC4-216ENST00000485645 ADGRE1Q14246 886 aa19.84■□□□□ 0.77
SMC4-216ENST00000485645 MFSD10Q14728 455 aa19.84■□□□□ 0.77
SMC4-216ENST00000485645 KIAA0753Q2KHM9 967 aa19.84■□□□□ 0.77
SMC4-216ENST00000485645 CELF3Q5SZQ8 465 aaKnown RBP19.84■□□□□ 0.77
SMC4-216ENST00000485645 CASC1Q6TDU7 716 aa19.84■□□□□ 0.77
SMC4-216ENST00000485645 CTCFLQ8NI51 663 aaPredicted RBP19.84■□□□□ 0.77
SMC4-216ENST00000485645 PHOSPHO2Q8TCD6 241 aa19.84■□□□□ 0.77
SMC4-216ENST00000485645 PIBF1Q8WXW3 757 aa19.84■□□□□ 0.77
SMC4-216ENST00000485645 SPATA33Q96N06 139 aa19.84■□□□□ 0.77
SMC4-216ENST00000485645 CTAGE1Q96RT6 745 aa19.84■□□□□ 0.77
SMC4-216ENST00000485645 SLC9A7Q96T83 725 aa19.84■□□□□ 0.77
SMC4-216ENST00000485645 MAP3K14Q99558 947 aa19.84■□□□□ 0.77
SMC4-216ENST00000485645 HAS3O00219 553 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms