RNA–Protein interactions for RNA: ENST00000485560.5

ZNF248-206, Transcript of zinc finger protein 248, humanhuman

TSL 1 (best)

Gene ZNF248, Length 1,705 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248-206ENST00000485560 ARHGEF16Q5VV41 709 aa18.27■□□□□ 0.52
ZNF248-206ENST00000485560 ZNF579Q8NAF0 562 aaKnown RBP18.27■□□□□ 0.52
ZNF248-206ENST00000485560 MRPS27Q92552 414 aaKnown RBP18.27■□□□□ 0.52
ZNF248-206ENST00000485560 LENG9Q96B70 501 aa18.27■□□□□ 0.52
ZNF248-206ENST00000485560 PDCD2LQ9BRP1 358 aa18.27■□□□□ 0.52
ZNF248-206ENST00000485560 CPA4Q9UI42 421 aa18.27■□□□□ 0.52
ZNF248-206ENST00000485560 PLXNA1Q9UIW2 1896 aa18.27■□□□□ 0.52
ZNF248-206ENST00000485560 IGLV3-22A0A075B6J6 115 aa18.26■□□□□ 0.51
ZNF248-206ENST00000485560 A0A1B0GVL5 298 aa18.26■□□□□ 0.51
ZNF248-206ENST00000485560 CNTN2Q02246 1040 aa18.26■□□□□ 0.51
ZNF248-206ENST00000485560 NOGQ13253 232 aa18.26■□□□□ 0.51
ZNF248-206ENST00000485560 RESP18Q5W5W9 173 aa18.26■□□□□ 0.51
ZNF248-206ENST00000485560 PCNX4Q63HM2 1172 aa18.26■□□□□ 0.51
ZNF248-206ENST00000485560 DTHD1Q6ZMT9 781 aa18.26■□□□□ 0.51
ZNF248-206ENST00000485560 HAS1Q92839 578 aa18.26■□□□□ 0.51
ZNF248-206ENST00000485560 DOCK3Q8IZD9 2030 aa18.26■□□□□ 0.51
ZNF248-206ENST00000485560 MRPS9P82933 396 aaKnown RBP18.26■□□□□ 0.51
ZNF248-206ENST00000485560 NSUN6Q8TEA1 469 aaKnown RBP18.26■□□□□ 0.51
ZNF248-206ENST00000485560 GJA10Q969M2 543 aa18.26■□□□□ 0.51
ZNF248-206ENST00000485560 UIMC1Q96RL1 719 aa18.26■□□□□ 0.51
ZNF248-206ENST00000485560 MMP19Q99542 508 aa18.26■□□□□ 0.51
ZNF248-206ENST00000485560 ASTN1O14525 1302 aa18.25■□□□□ 0.51
ZNF248-206ENST00000485560 NR1I2O75469 434 aa18.25■□□□□ 0.51
ZNF248-206ENST00000485560 BCRP11274 1271 aa18.25■□□□□ 0.51
ZNF248-206ENST00000485560 MYCLP12524 364 aaPredicted RBP18.25■□□□□ 0.51
ZNF248-206ENST00000485560 TXKP42681 527 aa18.25■□□□□ 0.51
ZNF248-206ENST00000485560 KCTD2Q14681 263 aa18.25■□□□□ 0.51
ZNF248-206ENST00000485560 CEP55Q53EZ4 464 aa18.25■□□□□ 0.51
ZNF248-206ENST00000485560 USP49Q70CQ1 688 aa18.25■□□□□ 0.51
ZNF248-206ENST00000485560 KCNMB3Q9NPA1 279 aa18.25■□□□□ 0.51
ZNF248-206ENST00000485560 MCM3APO60318 1980 aa18.25■□□□□ 0.51
ZNF248-206ENST00000485560 POTEB2H3BUK9 544 aa18.24■□□□□ 0.51
ZNF248-206ENST00000485560 TLR2O60603 784 aa18.24■□□□□ 0.51
ZNF248-206ENST00000485560 FCER1AP12319 257 aa18.24■□□□□ 0.51
ZNF248-206ENST00000485560 PFKFB1P16118 471 aa18.24■□□□□ 0.51
ZNF248-206ENST00000485560 NDUFA8P51970 172 aa18.24■□□□□ 0.51
ZNF248-206ENST00000485560 HTRA3P83110 453 aa18.24■□□□□ 0.51
ZNF248-206ENST00000485560 CAVIN1Q6NZI2 390 aaKnown RBP18.24■□□□□ 0.51
ZNF248-206ENST00000485560 CCDC73Q6ZRK6 1079 aa18.24■□□□□ 0.51
ZNF248-206ENST00000485560 FAM133AQ8N9E0 248 aa18.24■□□□□ 0.51
ZNF248-206ENST00000485560 ENGASEQ8NFI3 743 aa18.24■□□□□ 0.51
ZNF248-206ENST00000485560 DNERQ8NFT8 737 aa18.24■□□□□ 0.51
ZNF248-206ENST00000485560 ETNPPLQ8TBG4 499 aa18.24■□□□□ 0.51
ZNF248-206ENST00000485560 MXRA8Q9BRK3 442 aa18.24■□□□□ 0.51
ZNF248-206ENST00000485560 ZFYVE28Q9HCC9 887 aa18.24■□□□□ 0.51
ZNF248-206ENST00000485560 SOWAHBA6NEL2 793 aa18.23■□□□□ 0.51
ZNF248-206ENST00000485560 MEIS1O00470 390 aa18.23■□□□□ 0.51
ZNF248-206ENST00000485560 MSH4O15457 936 aa18.23■□□□□ 0.51
ZNF248-206ENST00000485560 PGK2P07205 417 aa18.23■□□□□ 0.51
ZNF248-206ENST00000485560 NR3C2P08235 984 aa18.23■□□□□ 0.51
ZNF248-206ENST00000485560 ITGB5P18084 799 aa18.23■□□□□ 0.51
ZNF248-206ENST00000485560 LONP1P36776 959 aaKnown RBP18.23■□□□□ 0.51
ZNF248-206ENST00000485560 TECP42680 631 aa18.23■□□□□ 0.51
ZNF248-206ENST00000485560 CRHR2Q13324 411 aa18.23■□□□□ 0.51
ZNF248-206ENST00000485560 SNW1Q13573 536 aaKnown RBP18.23■□□□□ 0.51
ZNF248-206ENST00000485560 C17orf99Q6UX52 265 aa18.23■□□□□ 0.51
ZNF248-206ENST00000485560 PLA2G4DQ86XP0 818 aa18.23■□□□□ 0.51
ZNF248-206ENST00000485560 EPSTI1Q96J88 318 aa18.23■□□□□ 0.51
ZNF248-206ENST00000485560 DACT1Q9NYF0 836 aa18.23■□□□□ 0.51
ZNF248-206ENST00000485560 TMEM63CQ9P1W3 806 aa18.23■□□□□ 0.51
ZNF248-206ENST00000485560 HPSEQ9Y251 543 aa18.23■□□□□ 0.51
ZNF248-206ENST00000485560 UBIAD1Q9Y5Z9 338 aa18.23■□□□□ 0.51
ZNF248-206ENST00000485560 LRRC37A2A6NM11 1700 aa18.23■□□□□ 0.51
ZNF248-206ENST00000485560 DNAJC25-GNG10A0A024R161 153 aa18.23■□□□□ 0.51
ZNF248-206ENST00000485560 FAM237AA0A1B0GTK4 181 aa18.23■□□□□ 0.51
ZNF248-206ENST00000485560 MARCH6O60337 910 aa18.23■□□□□ 0.51
ZNF248-206ENST00000485560 ALDH5A1P51649 535 aaPredicted RBP18.23■□□□□ 0.51
ZNF248-206ENST00000485560 FAM160A1Q05DH4 1040 aa18.23■□□□□ 0.51
ZNF248-206ENST00000485560 VSIG10LQ86VR7 867 aa18.23■□□□□ 0.51
ZNF248-206ENST00000485560 SYMPKQ92797 1274 aaKnown RBP18.23■□□□□ 0.51
ZNF248-206ENST00000485560 WDR11Q9BZH6 1224 aa18.23■□□□□ 0.51
ZNF248-206ENST00000485560 TTC12Q9H892 705 aaPredicted RBP18.23■□□□□ 0.51
ZNF248-206ENST00000485560 TBX3O15119 743 aa18.22■□□□□ 0.51
ZNF248-206ENST00000485560 MGAMO43451 1857 aa18.22■□□□□ 0.51
ZNF248-206ENST00000485560 ARP10275 920 aa18.22■□□□□ 0.51
ZNF248-206ENST00000485560 CCND2P30279 289 aa18.22■□□□□ 0.51
ZNF248-206ENST00000485560 CDC25AP30304 524 aa18.22■□□□□ 0.51
ZNF248-206ENST00000485560 FXR2P51116 673 aaKnown RBP eCLIP18.22■□□□□ 0.51
ZNF248-206ENST00000485560 FMR1NBQ8N0W7 255 aaPredicted RBP18.22■□□□□ 0.51
ZNF248-206ENST00000485560 FAM13BQ9NYF5 915 aa18.22■□□□□ 0.51
ZNF248-206ENST00000485560 PP2D1A8MPX8 630 aa18.21■□□□□ 0.51
ZNF248-206ENST00000485560 CA12O43570 354 aa18.21■□□□□ 0.51
ZNF248-206ENST00000485560 SETQ01105 290 aaPredicted RBP18.21■□□□□ 0.51
ZNF248-206ENST00000485560 XRRA1Q6P2D8 792 aa18.21■□□□□ 0.51
ZNF248-206ENST00000485560 NIPA1Q7RTP0 329 aa18.21■□□□□ 0.51
ZNF248-206ENST00000485560 GPR142Q7Z601 462 aa18.21■□□□□ 0.51
ZNF248-206ENST00000485560 SLFN12Q8IYM2 578 aa18.21■□□□□ 0.51
ZNF248-206ENST00000485560 IGSF22Q8N9C0 903 aa18.21■□□□□ 0.51
ZNF248-206ENST00000485560 FGD4Q96M96 766 aa18.21■□□□□ 0.51
ZNF248-206ENST00000485560 FAM20AQ96MK3 541 aa18.21■□□□□ 0.51
ZNF248-206ENST00000485560 IWS1Q96ST2 819 aa18.21■□□□□ 0.51
ZNF248-206ENST00000485560 JADE2Q9NQC1 790 aa18.21■□□□□ 0.51
ZNF248-206ENST00000485560 ADD3Q9UEY8 706 aaKnown RBP18.21■□□□□ 0.51
ZNF248-206ENST00000485560 PCDHA12Q9UN75 941 aa18.21■□□□□ 0.51
ZNF248-206ENST00000485560 STRNO43815 780 aa18.2■□□□□ 0.5
ZNF248-206ENST00000485560 HSPA6P17066 643 aa18.2■□□□□ 0.5
ZNF248-206ENST00000485560 MAPK4P31152 587 aa18.2■□□□□ 0.5
ZNF248-206ENST00000485560 TMEM266Q2M3C6 531 aa18.2■□□□□ 0.5
ZNF248-206ENST00000485560 GZF1Q9H116 711 aaPredicted RBP18.2■□□□□ 0.5
ZNF248-206ENST00000485560 KCNH3Q9ULD8 1083 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms