RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 DDX41Q9UJV9 622 aaKnown RBP29.84■■■□□ 2.37
HLA-F-227ENST00000485513 VWCEQ96DN2 955 aa29.83■■■□□ 2.37
HLA-F-227ENST00000485513 PIGSQ96S52 555 aa29.83■■■□□ 2.37
HLA-F-227ENST00000485513 MRVI1Q9Y6F6 885 aa29.83■■■□□ 2.37
HLA-F-227ENST00000485513 PFKMP08237 780 aa29.82■■■□□ 2.36
HLA-F-227ENST00000485513 TROAPQ12815 778 aa29.82■■■□□ 2.36
HLA-F-227ENST00000485513 TMEM67Q5HYA8 995 aa29.82■■■□□ 2.36
HLA-F-227ENST00000485513 PDCD2LQ9BRP1 358 aa29.82■■■□□ 2.36
HLA-F-227ENST00000485513 NOD1Q9Y239 953 aa29.82■■■□□ 2.36
HLA-F-227ENST00000485513 RBM8AQ9Y5S9 174 aaKnown RBP29.82■■■□□ 2.36
HLA-F-227ENST00000485513 MYO9BQ13459 2157 aa29.81■■■□□ 2.36
HLA-F-227ENST00000485513 SCN5AQ14524 2016 aa29.81■■■□□ 2.36
HLA-F-227ENST00000485513 GBF1Q92538 1859 aa29.81■■■□□ 2.36
HLA-F-227ENST00000485513 CASTP20810 708 aaKnown RBP29.81■■■□□ 2.36
HLA-F-227ENST00000485513 HOXA13P31271 388 aaPredicted RBP29.81■■■□□ 2.36
HLA-F-227ENST00000485513 DEFB128Q7Z7B8 93 aa29.81■■■□□ 2.36
HLA-F-227ENST00000485513 CATIPQ7Z7H3 387 aa29.81■■■□□ 2.36
HLA-F-227ENST00000485513 SLC4A7Q9Y6M7 1214 aa29.81■■■□□ 2.36
HLA-F-227ENST00000485513 PRUNE2Q8WUY3 3088 aa29.81■■■□□ 2.36
HLA-F-227ENST00000485513 ZBBXA8MT70 800 aa29.8■■■□□ 2.36
HLA-F-227ENST00000485513 PITPNM1O00562 1244 aa29.8■■■□□ 2.36
HLA-F-227ENST00000485513 CYTH3O43739 400 aa29.8■■■□□ 2.36
HLA-F-227ENST00000485513 MYCLP12524 364 aaPredicted RBP29.8■■■□□ 2.36
HLA-F-227ENST00000485513 ANTXR2P58335 489 aa29.8■■■□□ 2.36
HLA-F-227ENST00000485513 DGKDQ16760 1214 aa29.8■■■□□ 2.36
HLA-F-227ENST00000485513 MB21D2Q8IYB1 491 aaPredicted RBP29.8■■■□□ 2.36
HLA-F-227ENST00000485513 RETREG2Q8NC44 543 aa29.8■■■□□ 2.36
HLA-F-227ENST00000485513 EMID1Q96A84 441 aaPredicted RBP29.8■■■□□ 2.36
HLA-F-227ENST00000485513 CHD9Q3L8U1 2897 aa29.79■■■□□ 2.36
HLA-F-227ENST00000485513 MYH7BA7E2Y1 1941 aa29.79■■■□□ 2.36
HLA-F-227ENST00000485513 PNMA6FA0A0J9YX94 578 aa29.79■■■□□ 2.36
HLA-F-227ENST00000485513 RFC2P35250 354 aa29.79■■■□□ 2.36
HLA-F-227ENST00000485513 BFSP2Q13515 415 aa29.79■■■□□ 2.36
HLA-F-227ENST00000485513 LAMC2Q13753 1193 aa29.79■■■□□ 2.36
HLA-F-227ENST00000485513 IGDCC4Q8TDY8 1250 aa29.79■■■□□ 2.36
HLA-F-227ENST00000485513 KAT2BQ92831 832 aa29.79■■■□□ 2.36
HLA-F-227ENST00000485513 GCOM1H8Y6P7 765 aaPredicted RBP29.78■■■□□ 2.36
HLA-F-227ENST00000485513 POLR2MP0CAP2 368 aa29.78■■■□□ 2.36
HLA-F-227ENST00000485513 PGM5Q15124 567 aa29.78■■■□□ 2.36
HLA-F-227ENST00000485513 PTGISQ16647 500 aa29.78■■■□□ 2.36
HLA-F-227ENST00000485513 SESTD1Q86VW0 696 aa29.78■■■□□ 2.36
HLA-F-227ENST00000485513 DHX37Q8IY37 1157 aaKnown RBP29.78■■■□□ 2.36
HLA-F-227ENST00000485513 NKX2-4Q9H2Z4 354 aa29.78■■■□□ 2.36
HLA-F-227ENST00000485513 TANC1Q9C0D5 1861 aa29.78■■■□□ 2.36
HLA-F-227ENST00000485513 IQCF3P0C7M6 154 aa29.77■■■□□ 2.36
HLA-F-227ENST00000485513 KCNV1Q6PIU1 500 aa29.77■■■□□ 2.36
HLA-F-227ENST00000485513 VSIG10LQ86VR7 867 aa29.77■■■□□ 2.36
HLA-F-227ENST00000485513 PPTC7Q8NI37 304 aa29.77■■■□□ 2.36
HLA-F-227ENST00000485513 GAS2L1Q99501 681 aaPredicted RBP29.77■■■□□ 2.36
HLA-F-227ENST00000485513 PRDM12Q9H4Q4 367 aa29.77■■■□□ 2.36
HLA-F-227ENST00000485513 SLC28A3Q9HAS3 691 aa29.77■■■□□ 2.36
HLA-F-227ENST00000485513 YBX2Q9Y2T7 364 aaKnown RBP29.77■■■□□ 2.36
HLA-F-227ENST00000485513 RGS20O76081 388 aa29.76■■■□□ 2.35
HLA-F-227ENST00000485513 ACTN1P12814 892 aa29.76■■■□□ 2.35
HLA-F-227ENST00000485513 GDF6Q6KF10 455 aaPredicted RBP29.76■■■□□ 2.35
HLA-F-227ENST00000485513 FCHSD1Q86WN1 690 aa29.76■■■□□ 2.35
HLA-F-227ENST00000485513 IL31RAQ8NI17 732 aa29.76■■■□□ 2.35
HLA-F-227ENST00000485513 COL25A1Q9BXS0 654 aaPredicted RBP29.76■■■□□ 2.35
HLA-F-227ENST00000485513 TRIP12Q14669 1992 aaPredicted RBP29.75■■■□□ 2.35
HLA-F-227ENST00000485513 ATP2A2P16615 1042 aaKnown RBP29.75■■■□□ 2.35
HLA-F-227ENST00000485513 CCND2P30279 289 aa29.75■■■□□ 2.35
HLA-F-227ENST00000485513 RABGGTBP53611 331 aa29.75■■■□□ 2.35
HLA-F-227ENST00000485513 CCDC155Q8N6L0 562 aa29.75■■■□□ 2.35
HLA-F-227ENST00000485513 MAP3K14Q99558 947 aa29.75■■■□□ 2.35
HLA-F-227ENST00000485513 KATNAL1Q9BW62 490 aa29.75■■■□□ 2.35
HLA-F-227ENST00000485513 LY9Q9HBG7 655 aa29.75■■■□□ 2.35
HLA-F-227ENST00000485513 PSEN2P49810 448 aa29.74■■■□□ 2.35
HLA-F-227ENST00000485513 CASC1Q6TDU7 716 aa29.74■■■□□ 2.35
HLA-F-227ENST00000485513 ZNF654Q8IZM8 581 aa29.74■■■□□ 2.35
HLA-F-227ENST00000485513 CAGE1Q8TC20 777 aa29.74■■■□□ 2.35
HLA-F-227ENST00000485513 PIBF1Q8WXW3 757 aa29.74■■■□□ 2.35
HLA-F-227ENST00000485513 PCDHA11Q9Y5I1 949 aa29.74■■■□□ 2.35
HLA-F-227ENST00000485513 CELF3Q5SZQ8 465 aaKnown RBP29.73■■■□□ 2.35
HLA-F-227ENST00000485513 MYSM1Q5VVJ2 828 aa29.73■■■□□ 2.35
HLA-F-227ENST00000485513 C7orf31Q8N865 590 aa29.73■■■□□ 2.35
HLA-F-227ENST00000485513 CTCFLQ8NI51 663 aaPredicted RBP29.73■■■□□ 2.35
HLA-F-227ENST00000485513 CTAGE1Q96RT6 745 aa29.73■■■□□ 2.35
HLA-F-227ENST00000485513 MTA3Q9BTC8 594 aa29.73■■■□□ 2.35
HLA-F-227ENST00000485513 FTOQ9C0B1 505 aaKnown RBP eCLIP29.73■■■□□ 2.35
HLA-F-227ENST00000485513 LSG1Q9H089 658 aaKnown RBP29.73■■■□□ 2.35
HLA-F-227ENST00000485513 GTF2IRD1Q9UHL9 959 aa29.73■■■□□ 2.35
HLA-F-227ENST00000485513 PRC1O43663 620 aa29.72■■■□□ 2.35
HLA-F-227ENST00000485513 DDAH1O94760 285 aa29.72■■■□□ 2.35
HLA-F-227ENST00000485513 GGPS1O95749 300 aa29.72■■■□□ 2.35
HLA-F-227ENST00000485513 F2P00734 622 aa29.72■■■□□ 2.35
HLA-F-227ENST00000485513 ZNF286BP0CG31 522 aa29.72■■■□□ 2.35
HLA-F-227ENST00000485513 TGFB3P10600 412 aa29.72■■■□□ 2.35
HLA-F-227ENST00000485513 KIF5BP33176 963 aa29.72■■■□□ 2.35
HLA-F-227ENST00000485513 MFSD10Q14728 455 aa29.72■■■□□ 2.35
HLA-F-227ENST00000485513 ALG1Q9BT22 464 aa29.72■■■□□ 2.35
HLA-F-227ENST00000485513 MYL10Q9BUA6 226 aa29.72■■■□□ 2.35
HLA-F-227ENST00000485513 SPZ1Q9BXG8 430 aa29.72■■■□□ 2.35
HLA-F-227ENST00000485513 HDAC6Q9UBN7 1215 aa29.72■■■□□ 2.35
HLA-F-227ENST00000485513 TET1Q8NFU7 2136 aa29.71■■■□□ 2.35
HLA-F-227ENST00000485513 SORBS3O60504 671 aa29.71■■■□□ 2.35
HLA-F-227ENST00000485513 HOXD8P13378 290 aaPredicted RBP29.71■■■□□ 2.35
HLA-F-227ENST00000485513 USP38Q8NB14 1042 aa29.71■■■□□ 2.35
HLA-F-227ENST00000485513 AFAP1L1Q8TED9 768 aa29.71■■■□□ 2.35
HLA-F-227ENST00000485513 ZFP91Q96JP5 570 aaPredicted RBP29.71■■■□□ 2.35
HLA-F-227ENST00000485513 SPATA33Q96N06 139 aa29.71■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms