RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 ZNF396Q96N95 335 aaPredicted RBP19.99■□□□□ 0.79
CHMP3-207ENST00000485465 NAP1L4Q99733 375 aaKnown RBP19.99■□□□□ 0.79
CHMP3-207ENST00000485465 STAM2O75886 525 aa19.98■□□□□ 0.79
CHMP3-207ENST00000485465 GCFC2P16383 781 aaKnown RBP19.98■□□□□ 0.79
CHMP3-207ENST00000485465 ZNF174Q15697 407 aa19.98■□□□□ 0.79
CHMP3-207ENST00000485465 OLFML2BQ68BL8 750 aa19.98■□□□□ 0.79
CHMP3-207ENST00000485465 MOXD1Q6UVY6 613 aa19.98■□□□□ 0.79
CHMP3-207ENST00000485465 MSL3Q8N5Y2 521 aaKnown RBP19.98■□□□□ 0.79
CHMP3-207ENST00000485465 ZFP91Q96JP5 570 aaPredicted RBP19.98■□□□□ 0.79
CHMP3-207ENST00000485465 MBOAT7Q96N66 472 aa19.98■□□□□ 0.79
CHMP3-207ENST00000485465 TINF2Q9BSI4 451 aa19.98■□□□□ 0.79
CHMP3-207ENST00000485465 RTEL1Q9NZ71 1219 aa19.98■□□□□ 0.79
CHMP3-207ENST00000485465 PCDHB6Q9Y5E3 794 aa19.98■□□□□ 0.79
CHMP3-207ENST00000485465 UBIAD1Q9Y5Z9 338 aa19.98■□□□□ 0.79
CHMP3-207ENST00000485465 PCNTO95613 3336 aa19.97■□□□□ 0.79
CHMP3-207ENST00000485465 FAM86B1E9PN63 330 aa19.97■□□□□ 0.79
CHMP3-207ENST00000485465 EIF3JO75822 258 aaKnown RBP19.97■□□□□ 0.79
CHMP3-207ENST00000485465 TDP2O95551 362 aa19.97■□□□□ 0.79
CHMP3-207ENST00000485465 FAM86B2P0C5J1 330 aa19.97■□□□□ 0.79
CHMP3-207ENST00000485465 PRMT2P55345 433 aa19.97■□□□□ 0.79
CHMP3-207ENST00000485465 DNM1Q05193 864 aaKnown RBP19.97■□□□□ 0.79
CHMP3-207ENST00000485465 IRF5Q13568 498 aa19.97■□□□□ 0.79
CHMP3-207ENST00000485465 CCL14Q16627 93 aa19.97■□□□□ 0.79
CHMP3-207ENST00000485465 CEP55Q53EZ4 464 aa19.97■□□□□ 0.79
CHMP3-207ENST00000485465 ATL3Q6DD88 541 aa19.97■□□□□ 0.79
CHMP3-207ENST00000485465 ARMCX2Q7L311 632 aa19.97■□□□□ 0.79
CHMP3-207ENST00000485465 TNPO1Q92973 898 aaKnown RBP19.97■□□□□ 0.79
CHMP3-207ENST00000485465 MXRA8Q9BRK3 442 aa19.97■□□□□ 0.79
CHMP3-207ENST00000485465 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.97■□□□□ 0.79
CHMP3-207ENST00000485465 FLRT1Q9NZU1 646 aa19.97■□□□□ 0.79
CHMP3-207ENST00000485465 SYNGAP1Q96PV0 1343 aa19.97■□□□□ 0.79
CHMP3-207ENST00000485465 PLXNA1Q9UIW2 1896 aa19.96■□□□□ 0.79
CHMP3-207ENST00000485465 MYH7BA7E2Y1 1941 aa19.96■□□□□ 0.79
CHMP3-207ENST00000485465 MEIS1O00470 390 aa19.96■□□□□ 0.79
CHMP3-207ENST00000485465 IGHA2P01877 340 aa19.96■□□□□ 0.79
CHMP3-207ENST00000485465 ITGB5P18084 799 aa19.96■□□□□ 0.79
CHMP3-207ENST00000485465 MCM7P33993 719 aa19.96■□□□□ 0.79
CHMP3-207ENST00000485465 CTCFP49711 727 aaPredicted RBP19.96■□□□□ 0.79
CHMP3-207ENST00000485465 ORC2Q13416 577 aaPredicted RBP19.96■□□□□ 0.79
CHMP3-207ENST00000485465 Q4G0T1 1027 aa19.96■□□□□ 0.79
CHMP3-207ENST00000485465 OTOP1Q7RTM1 612 aa19.96■□□□□ 0.79
CHMP3-207ENST00000485465 NIPA1Q7RTP0 329 aa19.96■□□□□ 0.79
CHMP3-207ENST00000485465 CYP2W1Q8TAV3 490 aa19.96■□□□□ 0.79
CHMP3-207ENST00000485465 USP28Q96RU2 1077 aa19.96■□□□□ 0.79
CHMP3-207ENST00000485465 JADE2Q9NQC1 790 aa19.96■□□□□ 0.79
CHMP3-207ENST00000485465 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.96■□□□□ 0.79
CHMP3-207ENST00000485465 TFIP11Q9UBB9 837 aaKnown RBP19.96■□□□□ 0.79
CHMP3-207ENST00000485465 DDX25Q9UHL0 483 aaKnown RBP19.96■□□□□ 0.79
CHMP3-207ENST00000485465 CLIC4Q9Y696 253 aa19.96■□□□□ 0.79
CHMP3-207ENST00000485465 DOCK3Q8IZD9 2030 aa19.96■□□□□ 0.79
CHMP3-207ENST00000485465 IGLV3-22A0A075B6J6 115 aa19.95■□□□□ 0.78
CHMP3-207ENST00000485465 SNAI1O95863 264 aaPredicted RBP19.95■□□□□ 0.78
CHMP3-207ENST00000485465 SF3A1Q15459 793 aaKnown RBP19.95■□□□□ 0.78
CHMP3-207ENST00000485465 PRR16Q569H4 304 aa19.95■□□□□ 0.78
CHMP3-207ENST00000485465 ANO1Q5XXA6 986 aa19.95■□□□□ 0.78
CHMP3-207ENST00000485465 TRMT44Q8IYL2 757 aaKnown RBP19.95■□□□□ 0.78
CHMP3-207ENST00000485465 LENG9Q96B70 501 aa19.95■□□□□ 0.78
CHMP3-207ENST00000485465 CHAMP1Q96JM3 812 aa19.95■□□□□ 0.78
CHMP3-207ENST00000485465 INPP4AQ96PE3 977 aaPredicted RBP19.95■□□□□ 0.78
CHMP3-207ENST00000485465 FTOQ9C0B1 505 aaKnown RBP eCLIP19.95■□□□□ 0.78
CHMP3-207ENST00000485465 TRIM17Q9Y577 477 aa19.95■□□□□ 0.78
CHMP3-207ENST00000485465 SLC37A4O43826 429 aa19.94■□□□□ 0.78
CHMP3-207ENST00000485465 RGS20O76081 388 aa19.94■□□□□ 0.78
CHMP3-207ENST00000485465 LBX1P52954 281 aa19.94■□□□□ 0.78
CHMP3-207ENST00000485465 CEBPZQ03701 1054 aaKnown RBP19.94■□□□□ 0.78
CHMP3-207ENST00000485465 NLRX1Q86UT6 975 aa19.94■□□□□ 0.78
CHMP3-207ENST00000485465 PLA2G4DQ86XP0 818 aa19.94■□□□□ 0.78
CHMP3-207ENST00000485465 RAET1EQ8TD07 263 aa19.94■□□□□ 0.78
CHMP3-207ENST00000485465 WDR11Q9BZH6 1224 aa19.94■□□□□ 0.78
CHMP3-207ENST00000485465 POLR3EQ9NVU0 708 aa19.94■□□□□ 0.78
CHMP3-207ENST00000485465 CFAP45Q9UL16 551 aa19.94■□□□□ 0.78
CHMP3-207ENST00000485465 NEMFO60524 1076 aa19.93■□□□□ 0.78
CHMP3-207ENST00000485465 NASPP49321 788 aaPredicted RBP19.93■□□□□ 0.78
CHMP3-207ENST00000485465 KRT85P78386 507 aa19.93■□□□□ 0.78
CHMP3-207ENST00000485465 SETQ01105 290 aaPredicted RBP19.93■□□□□ 0.78
CHMP3-207ENST00000485465 GNPTABQ3T906 1256 aa19.93■□□□□ 0.78
CHMP3-207ENST00000485465 EEPD1Q7L9B9 569 aa19.93■□□□□ 0.78
CHMP3-207ENST00000485465 POTEDQ86YR6 584 aa19.93■□□□□ 0.78
CHMP3-207ENST00000485465 C4orf32Q8N8J7 132 aa19.93■□□□□ 0.78
CHMP3-207ENST00000485465 TRIB2Q92519 343 aa19.93■□□□□ 0.78
CHMP3-207ENST00000485465 GPRASP2Q96D09 838 aa19.93■□□□□ 0.78
CHMP3-207ENST00000485465 VTA1Q9NP79 307 aa19.93■□□□□ 0.78
CHMP3-207ENST00000485465 CEP131Q9UPN4 1083 aa19.93■□□□□ 0.78
CHMP3-207ENST00000485465 MAFGO15525 162 aa19.92■□□□□ 0.78
CHMP3-207ENST00000485465 ADCY3O60266 1144 aa19.92■□□□□ 0.78
CHMP3-207ENST00000485465 BMP15O95972 392 aa19.92■□□□□ 0.78
CHMP3-207ENST00000485465 ARP10275 920 aa19.92■□□□□ 0.78
CHMP3-207ENST00000485465 NCLP19338 710 aaKnown RBP19.92■□□□□ 0.78
CHMP3-207ENST00000485465 CYP2C19P33261 490 aa19.92■□□□□ 0.78
CHMP3-207ENST00000485465 PTGDRQ13258 359 aa19.92■□□□□ 0.78
CHMP3-207ENST00000485465 MTMR1Q13613 665 aa19.92■□□□□ 0.78
CHMP3-207ENST00000485465 PTPAQ15257 358 aa19.92■□□□□ 0.78
CHMP3-207ENST00000485465 MFSD14CQ5VZR4 134 aa19.92■□□□□ 0.78
CHMP3-207ENST00000485465 SEPT14Q6ZU15 432 aa19.92■□□□□ 0.78
CHMP3-207ENST00000485465 FBXO16Q8IX29 292 aaPredicted RBP19.92■□□□□ 0.78
CHMP3-207ENST00000485465 KATNBL1Q9H079 304 aa19.92■□□□□ 0.78
CHMP3-207ENST00000485465 TMEM60Q9H2L4 133 aa19.92■□□□□ 0.78
CHMP3-207ENST00000485465 ABHD16BQ9H3Z7 469 aa19.92■□□□□ 0.78
CHMP3-207ENST00000485465 KCNH7Q9NS40 1196 aa19.92■□□□□ 0.78
CHMP3-207ENST00000485465 LRRC37A2A6NM11 1700 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms