RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 EIF3JO75822 258 aaKnown RBP22.39■■□□□ 1.17
COL27A1-205ENST00000485397 ACTN1P12814 892 aa22.39■■□□□ 1.17
COL27A1-205ENST00000485397 CASTP20810 708 aaKnown RBP22.39■■□□□ 1.17
COL27A1-205ENST00000485397 HSD17B4P51659 736 aa22.39■■□□□ 1.17
COL27A1-205ENST00000485397 BFSP2Q13515 415 aa22.39■■□□□ 1.17
COL27A1-205ENST00000485397 SLC35G1Q2M3R5 365 aa22.39■■□□□ 1.17
COL27A1-205ENST00000485397 GDF6Q6KF10 455 aaPredicted RBP22.39■■□□□ 1.17
COL27A1-205ENST00000485397 CTAGE1Q96RT6 745 aa22.39■■□□□ 1.17
COL27A1-205ENST00000485397 FTOQ9C0B1 505 aaKnown RBP eCLIP22.39■■□□□ 1.175e-8■□□□□ 8.3
COL27A1-205ENST00000485397 MYH6P13533 1939 aa22.38■■□□□ 1.17
COL27A1-205ENST00000485397 PALM3A6NDB9 673 aaPredicted RBP22.38■■□□□ 1.17
COL27A1-205ENST00000485397 PTH1RQ03431 593 aa22.38■■□□□ 1.17
COL27A1-205ENST00000485397 SUPT16HQ9Y5B9 1047 aaKnown RBP22.38■■□□□ 1.17
COL27A1-205ENST00000485397 PCDHA1Q9Y5I3 950 aa22.38■■□□□ 1.17
COL27A1-205ENST00000485397 MRVI1Q9Y6F6 885 aa22.38■■□□□ 1.17
COL27A1-205ENST00000485397 ZBTB5O15062 677 aa22.37■■□□□ 1.17
COL27A1-205ENST00000485397 CYP21A2P08686 494 aa22.37■■□□□ 1.17
COL27A1-205ENST00000485397 MYCLP12524 364 aaPredicted RBP22.37■■□□□ 1.17
COL27A1-205ENST00000485397 HOXA13P31271 388 aaPredicted RBP22.37■■□□□ 1.17
COL27A1-205ENST00000485397 GHRHRQ02643 423 aa22.37■■□□□ 1.17
COL27A1-205ENST00000485397 TRDNQ13061 729 aa22.37■■□□□ 1.17
COL27A1-205ENST00000485397 DGKDQ16760 1214 aa22.37■■□□□ 1.17
COL27A1-205ENST00000485397 TMEM67Q5HYA8 995 aa22.37■■□□□ 1.17
COL27A1-205ENST00000485397 SESTD1Q86VW0 696 aa22.37■■□□□ 1.17
COL27A1-205ENST00000485397 HOMER1Q86YM7 354 aa22.37■■□□□ 1.17
COL27A1-205ENST00000485397 PDCD2LQ9BRP1 358 aa22.37■■□□□ 1.17
COL27A1-205ENST00000485397 SENP2Q9HC62 589 aa22.37■■□□□ 1.17
COL27A1-205ENST00000485397 TAF6LQ9Y6J9 622 aa22.37■■□□□ 1.17
COL27A1-205ENST00000485397 VCANP13611 3396 aa22.37■■□□□ 1.17
COL27A1-205ENST00000485397 KIAA1217Q5T5P2 1943 aa22.36■■□□□ 1.17
COL27A1-205ENST00000485397 RGS20O76081 388 aa22.36■■□□□ 1.17
COL27A1-205ENST00000485397 CA3P07451 260 aa22.36■■□□□ 1.17
COL27A1-205ENST00000485397 PSEN2P49810 448 aa22.36■■□□□ 1.17
COL27A1-205ENST00000485397 GPNMBQ14956 572 aa22.36■■□□□ 1.17
COL27A1-205ENST00000485397 DHX38Q92620 1227 aaKnown RBP22.36■■□□□ 1.17
COL27A1-205ENST00000485397 SLC9A7Q96T83 725 aa22.36■■□□□ 1.17
COL27A1-205ENST00000485397 ALG1Q9BT22 464 aa22.36■■□□□ 1.17
COL27A1-205ENST00000485397 HDAC6Q9UBN7 1215 aa22.36■■□□□ 1.17
COL27A1-205ENST00000485397 RBAK-RBAKDNI3L0D1 243 aa22.35■■□□□ 1.17
COL27A1-205ENST00000485397 RFXAPO00287 272 aa22.35■■□□□ 1.17
COL27A1-205ENST00000485397 IFIT3O14879 490 aaKnown RBP22.35■■□□□ 1.17
COL27A1-205ENST00000485397 SORBS3O60504 671 aa22.35■■□□□ 1.17
COL27A1-205ENST00000485397 CHMLP26374 656 aa22.35■■□□□ 1.17
COL27A1-205ENST00000485397 LAMC2Q13753 1193 aa22.35■■□□□ 1.17
COL27A1-205ENST00000485397 GRM4Q14833 912 aa22.35■■□□□ 1.17
COL27A1-205ENST00000485397 STOX1Q6ZVD7 989 aa22.35■■□□□ 1.17
COL27A1-205ENST00000485397 DHX37Q8IY37 1157 aaKnown RBP22.35■■□□□ 1.17
COL27A1-205ENST00000485397 TET1Q8NFU7 2136 aa22.35■■□□□ 1.17
COL27A1-205ENST00000485397 IL31RAQ8NI17 732 aa22.35■■□□□ 1.17
COL27A1-205ENST00000485397 CAGE1Q8TC20 777 aa22.35■■□□□ 1.17
COL27A1-205ENST00000485397 EMID1Q96A84 441 aaPredicted RBP22.35■■□□□ 1.17
COL27A1-205ENST00000485397 ZFP91Q96JP5 570 aaPredicted RBP22.35■■□□□ 1.17
COL27A1-205ENST00000485397 PIGSQ96S52 555 aa22.35■■□□□ 1.17
COL27A1-205ENST00000485397 CERS4Q9HA82 394 aa22.35■■□□□ 1.17
COL27A1-205ENST00000485397 THEGQ9P2T0 379 aa22.35■■□□□ 1.17
COL27A1-205ENST00000485397 GTF2IRD1Q9UHL9 959 aa22.35■■□□□ 1.17
COL27A1-205ENST00000485397 U3KPZ7 1027 aaPredicted RBP22.35■■□□□ 1.17
COL27A1-205ENST00000485397 ZNF286BP0CG31 522 aa22.34■■□□□ 1.17
COL27A1-205ENST00000485397 HERC6Q8IVU3 1022 aa22.34■■□□□ 1.17
COL27A1-205ENST00000485397 MICALL1Q8N3F8 863 aa22.34■■□□□ 1.17
COL27A1-205ENST00000485397 CCDC155Q8N6L0 562 aa22.34■■□□□ 1.17
COL27A1-205ENST00000485397 C7orf31Q8N865 590 aa22.34■■□□□ 1.17
COL27A1-205ENST00000485397 PPTC7Q8NI37 304 aa22.34■■□□□ 1.17
COL27A1-205ENST00000485397 PHOSPHO2Q8TCD6 241 aa22.34■■□□□ 1.17
COL27A1-205ENST00000485397 AFAP1L1Q8TED9 768 aa22.34■■□□□ 1.17
COL27A1-205ENST00000485397 ATXN2LQ8WWM7 1075 aaKnown RBP22.34■■□□□ 1.17
COL27A1-205ENST00000485397 RUFY2Q8WXA3 655 aa22.34■■□□□ 1.17
COL27A1-205ENST00000485397 RIOX1Q9H6W3 641 aa22.34■■□□□ 1.17
COL27A1-205ENST00000485397 MAP3K20Q9NYL2 800 aaKnown RBP22.34■■□□□ 1.17
COL27A1-205ENST00000485397 TANC1Q9C0D5 1861 aa22.34■■□□□ 1.17
COL27A1-205ENST00000485397 TRIP12Q14669 1992 aaPredicted RBP22.34■■□□□ 1.17
COL27A1-205ENST00000485397 TTC28Q96AY4 2481 aa22.33■■□□□ 1.17
COL27A1-205ENST00000485397 CYTH3O43739 400 aa22.33■■□□□ 1.17
COL27A1-205ENST00000485397 ARHGEF15O94989 841 aa22.33■■□□□ 1.17
COL27A1-205ENST00000485397 SELPP16109 830 aa22.33■■□□□ 1.17
COL27A1-205ENST00000485397 MFSD10Q14728 455 aa22.33■■□□□ 1.17
COL27A1-205ENST00000485397 PGM5Q15124 567 aa22.33■■□□□ 1.17
COL27A1-205ENST00000485397 VSIG10LQ86VR7 867 aa22.33■■□□□ 1.17
COL27A1-205ENST00000485397 CHD9Q3L8U1 2897 aa22.33■■□□□ 1.17
COL27A1-205ENST00000485397 EPOPA6NHQ4 379 aa22.32■■□□□ 1.16
COL27A1-205ENST00000485397 E7EWF7 191 aa22.32■■□□□ 1.16
COL27A1-205ENST00000485397 HAS3O00219 553 aa22.32■■□□□ 1.16
COL27A1-205ENST00000485397 F2P00734 622 aa22.32■■□□□ 1.16
COL27A1-205ENST00000485397 KIAA0753Q2KHM9 967 aa22.32■■□□□ 1.16
COL27A1-205ENST00000485397 MYSM1Q5VVJ2 828 aa22.32■■□□□ 1.16
COL27A1-205ENST00000485397 LRRC8DQ7L1W4 858 aa22.32■■□□□ 1.16
COL27A1-205ENST00000485397 FCHSD1Q86WN1 690 aa22.32■■□□□ 1.16
COL27A1-205ENST00000485397 ASB2Q96Q27 587 aa22.32■■□□□ 1.16
COL27A1-205ENST00000485397 KATNAL1Q9BW62 490 aa22.32■■□□□ 1.16
COL27A1-205ENST00000485397 SPTBN5Q9NRC6 3674 aaKnown RBP22.32■■□□□ 1.16
COL27A1-205ENST00000485397 ERICH2A1L162 156 aa22.31■■□□□ 1.16
COL27A1-205ENST00000485397 GCOM1H8Y6P7 765 aaPredicted RBP22.31■■□□□ 1.16
COL27A1-205ENST00000485397 BAIAP3O94812 1187 aa22.31■■□□□ 1.16
COL27A1-205ENST00000485397 GGPS1O95749 300 aa22.31■■□□□ 1.16
COL27A1-205ENST00000485397 POLR2MP0CAP2 368 aa22.31■■□□□ 1.16
COL27A1-205ENST00000485397 CKBP12277 381 aa22.31■■□□□ 1.16
COL27A1-205ENST00000485397 ZNF200P98182 395 aaPredicted RBP22.31■■□□□ 1.16
COL27A1-205ENST00000485397 SP2Q02086 613 aa22.31■■□□□ 1.16
COL27A1-205ENST00000485397 RBL2Q08999 1139 aa22.31■■□□□ 1.16
COL27A1-205ENST00000485397 TROAPQ12815 778 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms