RNA–Protein interactions for RNA: ENST00000485248.2

CAPN13-206, Transcript of calpain 13, humanhuman

TSL 3

Gene CAPN13, Length 710 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-206ENST00000485248 RTP3Q9BQQ7 232 aa7.6□□□□□ -1.19
CAPN13-206ENST00000485248 EHD4Q9H223 541 aa7.6□□□□□ -1.19
CAPN13-206ENST00000485248 LIMD1Q9UGP4 676 aa7.6□□□□□ -1.19
CAPN13-206ENST00000485248 Q9Y3F1 56 aa7.6□□□□□ -1.19
CAPN13-206ENST00000485248 NCOR2Q9Y618 2525 aa7.6□□□□□ -1.19
CAPN13-206ENST00000485248 MCM3APO60318 1980 aa7.59□□□□□ -1.19
CAPN13-206ENST00000485248 DCDC2BA2VCK2 349 aa7.59□□□□□ -1.19
CAPN13-206ENST00000485248 POM121CA8CG34 1229 aa7.59□□□□□ -1.19
CAPN13-206ENST00000485248 USP17L12C9JPN9 530 aa7.59□□□□□ -1.19
CAPN13-206ENST00000485248 USP17L21D6R901 530 aa7.59□□□□□ -1.19
CAPN13-206ENST00000485248 VWA5AO00534 786 aa7.59□□□□□ -1.19
CAPN13-206ENST00000485248 LINC01565O15544 149 aa7.59□□□□□ -1.19
CAPN13-206ENST00000485248 UPP2O95045 317 aa7.59□□□□□ -1.19
CAPN13-206ENST00000485248 POLR3DP05423 398 aaPredicted RBP7.59□□□□□ -1.19
CAPN13-206ENST00000485248 RB1P06400 928 aa7.59□□□□□ -1.19
CAPN13-206ENST00000485248 ATF7P17544 494 aaPredicted RBP7.59□□□□□ -1.19
CAPN13-206ENST00000485248 IL15P40933 162 aaPredicted RBP7.59□□□□□ -1.19
CAPN13-206ENST00000485248 ABL2P42684 1182 aa7.59□□□□□ -1.19
CAPN13-206ENST00000485248 ICA1Q05084 483 aa7.59□□□□□ -1.19
CAPN13-206ENST00000485248 ADAM15Q13444 863 aa7.59□□□□□ -1.19
CAPN13-206ENST00000485248 TSR1Q2NL82 804 aaKnown RBP7.59□□□□□ -1.19
CAPN13-206ENST00000485248 PPM1JQ5JR12 505 aa7.59□□□□□ -1.19
CAPN13-206ENST00000485248 IQSEC1Q6DN90 963 aa7.59□□□□□ -1.19
CAPN13-206ENST00000485248 TMEM179Q6ZVK1 233 aa7.59□□□□□ -1.19
CAPN13-206ENST00000485248 FIBCD1Q8N539 461 aa7.59□□□□□ -1.19
CAPN13-206ENST00000485248 SPATA5Q8NB90 893 aa7.59□□□□□ -1.19
CAPN13-206ENST00000485248 GLMNQ92990 594 aa7.59□□□□□ -1.19
CAPN13-206ENST00000485248 OCEL1Q9H607 264 aa7.59□□□□□ -1.19
CAPN13-206ENST00000485248 USP18Q9UMW8 372 aa7.59□□□□□ -1.19
CAPN13-206ENST00000485248 GNEQ9Y223 722 aaKnown RBP7.59□□□□□ -1.19
CAPN13-206ENST00000485248 AKAP2Q9Y2D5 859 aa7.59□□□□□ -1.19
CAPN13-206ENST00000485248 R4GN57 208 aa7.59□□□□□ -1.19
CAPN13-206ENST00000485248 MAP1BP46821 2468 aaKnown RBP7.58□□□□□ -1.2
CAPN13-206ENST00000485248 EMSYQ7Z589 1322 aa7.58□□□□□ -1.2
CAPN13-206ENST00000485248 FAM208BQ5VWN6 2430 aa7.58□□□□□ -1.2
CAPN13-206ENST00000485248 GVINP1Q7Z2Y8 2422 aa7.58□□□□□ -1.2
CAPN13-206ENST00000485248 PARP14Q460N5 1801 aa7.58□□□□□ -1.2
CAPN13-206ENST00000485248 KPNA6O60684 536 aa7.58□□□□□ -1.2
CAPN13-206ENST00000485248 KINO60870 393 aaKnown RBP7.58□□□□□ -1.2
CAPN13-206ENST00000485248 ZBED4O75132 1171 aa7.58□□□□□ -1.2
CAPN13-206ENST00000485248 CIAO1O76071 339 aa7.58□□□□□ -1.2
CAPN13-206ENST00000485248 OATP04181 439 aa7.58□□□□□ -1.2
CAPN13-206ENST00000485248 SP100P23497 879 aaPredicted RBP7.58□□□□□ -1.2
CAPN13-206ENST00000485248 ADORA1P30542 326 aa7.58□□□□□ -1.2
CAPN13-206ENST00000485248 PURAQ00577 322 aaKnown RBP7.58□□□□□ -1.2
CAPN13-206ENST00000485248 TBC1D9Q6ZT07 1266 aa7.58□□□□□ -1.2
CAPN13-206ENST00000485248 KIAA1211Q6ZU35 1233 aa7.58□□□□□ -1.2
CAPN13-206ENST00000485248 CPXCR1Q8N123 301 aa7.58□□□□□ -1.2
CAPN13-206ENST00000485248 DCLK2Q8N568 766 aa7.58□□□□□ -1.2
CAPN13-206ENST00000485248 ANKRD44Q8N8A2 993 aa7.58□□□□□ -1.2
CAPN13-206ENST00000485248 DTWD2Q8NBA8 298 aa7.58□□□□□ -1.2
CAPN13-206ENST00000485248 SP7Q8TDD2 431 aaPredicted RBP7.58□□□□□ -1.2
CAPN13-206ENST00000485248 KAZALD1Q96I82 304 aa7.58□□□□□ -1.2
CAPN13-206ENST00000485248 MSLNLQ96KJ4 702 aa7.58□□□□□ -1.2
CAPN13-206ENST00000485248 NEUROD6Q96NK8 337 aa7.58□□□□□ -1.2
CAPN13-206ENST00000485248 VCPKMTQ9H867 229 aa7.58□□□□□ -1.2
CAPN13-206ENST00000485248 FBXL21Q9UKT6 434 aa7.58□□□□□ -1.2
CAPN13-206ENST00000485248 PPP1R9AQ9ULJ8 1098 aa7.58□□□□□ -1.2
CAPN13-206ENST00000485248 CFAP47Q6ZTR5 3102 aa7.58□□□□□ -1.2
CAPN13-206ENST00000485248 ASTN1O14525 1302 aa7.57□□□□□ -1.2
CAPN13-206ENST00000485248 MYH8P13535 1937 aa7.57□□□□□ -1.2
CAPN13-206ENST00000485248 DNAJC25-GNG10A0A024R161 153 aa7.57□□□□□ -1.2
CAPN13-206ENST00000485248 PATL2C9JE40 543 aaKnown RBP7.57□□□□□ -1.2
CAPN13-206ENST00000485248 APAF1O14727 1248 aa7.57□□□□□ -1.2
CAPN13-206ENST00000485248 MMP1P03956 469 aa7.57□□□□□ -1.2
CAPN13-206ENST00000485248 AOC1P19801 751 aa7.57□□□□□ -1.2
CAPN13-206ENST00000485248 GTF2F1P35269 517 aaKnown RBP eCLIP7.57□□□□□ -1.2
CAPN13-206ENST00000485248 HTRA4P83105 476 aaPredicted RBP7.57□□□□□ -1.2
CAPN13-206ENST00000485248 EEPD1Q7L9B9 569 aa7.57□□□□□ -1.2
CAPN13-206ENST00000485248 EFHBQ8N7U6 833 aa7.57□□□□□ -1.2
CAPN13-206ENST00000485248 CHST13Q8NET6 341 aa7.57□□□□□ -1.2
CAPN13-206ENST00000485248 OR6J1Q8NGC5 347 aa7.57□□□□□ -1.2
CAPN13-206ENST00000485248 EXOC6Q8TAG9 804 aa7.57□□□□□ -1.2
CAPN13-206ENST00000485248 PTCD2Q8WV60 388 aaKnown RBP7.57□□□□□ -1.2
CAPN13-206ENST00000485248 XAGE2Q96GT9 111 aa7.57□□□□□ -1.2
CAPN13-206ENST00000485248 NEK1Q96PY6 1258 aa7.57□□□□□ -1.2
CAPN13-206ENST00000485248 SLF1Q9BQI6 1058 aa7.57□□□□□ -1.2
CAPN13-206ENST00000485248 IFIH1Q9BYX4 1025 aaKnown RBP7.57□□□□□ -1.2
CAPN13-206ENST00000485248 ZNF214Q9UL59 606 aaPredicted RBP7.57□□□□□ -1.2
CAPN13-206ENST00000485248 BARX2Q9UMQ3 279 aaPredicted RBP7.57□□□□□ -1.2
CAPN13-206ENST00000485248 MICAL3Q7RTP6 2002 aa7.56□□□□□ -1.2
CAPN13-206ENST00000485248 A0A1W2PRG0 241 aa7.56□□□□□ -1.2
CAPN13-206ENST00000485248 EIF4E1BA6NMX2 242 aaKnown RBP7.56□□□□□ -1.2
CAPN13-206ENST00000485248 LGR5O75473 907 aa7.56□□□□□ -1.2
CAPN13-206ENST00000485248 CXCL10P02778 98 aa7.56□□□□□ -1.2
CAPN13-206ENST00000485248 PPP4CP60510 307 aa7.56□□□□□ -1.2
CAPN13-206ENST00000485248 ZNF200P98182 395 aaPredicted RBP7.56□□□□□ -1.2
CAPN13-206ENST00000485248 KCNA1Q09470 495 aa7.56□□□□□ -1.2
CAPN13-206ENST00000485248 ATG9AQ7Z3C6 839 aa7.56□□□□□ -1.2
CAPN13-206ENST00000485248 RBM23Q86U06 439 aaKnown RBP7.56□□□□□ -1.2
CAPN13-206ENST00000485248 FBXO16Q8IX29 292 aaPredicted RBP7.56□□□□□ -1.2
CAPN13-206ENST00000485248 ZNF384Q8TF68 577 aa7.56□□□□□ -1.2
CAPN13-206ENST00000485248 UBE2Q2Q8WVN8 375 aa7.56□□□□□ -1.2
CAPN13-206ENST00000485248 MPHOSPH6Q99547 160 aaKnown RBP7.56□□□□□ -1.2
CAPN13-206ENST00000485248 HMG20BQ9P0W2 317 aa7.56□□□□□ -1.2
CAPN13-206ENST00000485248 ADAMTS8Q9UP79 889 aa7.56□□□□□ -1.2
CAPN13-206ENST00000485248 TMX2Q9Y320 296 aa7.56□□□□□ -1.2
CAPN13-206ENST00000485248 ADGRG1Q9Y653 693 aa7.56□□□□□ -1.2
CAPN13-206ENST00000485248 DMDP11532 3685 aa7.56□□□□□ -1.2
CAPN13-206ENST00000485248 TET1Q8NFU7 2136 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms