RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 IRS2Q9Y4H2 1338 aa9.65□□□□□ -0.86
UBR3-210ENST00000484596 DLX3O60479 287 aa9.65□□□□□ -0.86
UBR3-210ENST00000484596 BUB1BO60566 1050 aaPredicted RBP9.65□□□□□ -0.86
UBR3-210ENST00000484596 ECI1P42126 302 aa9.65□□□□□ -0.86
UBR3-210ENST00000484596 ZNF200P98182 395 aaPredicted RBP9.65□□□□□ -0.86
UBR3-210ENST00000484596 TCEA2Q15560 299 aa9.65□□□□□ -0.86
UBR3-210ENST00000484596 E4F1Q66K89 784 aaPredicted RBP9.65□□□□□ -0.86
UBR3-210ENST00000484596 CPNE8Q86YQ8 564 aa9.65□□□□□ -0.86
UBR3-210ENST00000484596 KISS1RQ969F8 398 aaPredicted RBP9.65□□□□□ -0.86
UBR3-210ENST00000484596 PARD6AQ9NPB6 346 aa9.65□□□□□ -0.86
UBR3-210ENST00000484596 MRPS23Q9Y3D9 190 aaKnown RBP9.65□□□□□ -0.86
UBR3-210ENST00000484596 F8W031 263 aaPredicted RBP9.64□□□□□ -0.87
UBR3-210ENST00000484596 PAMP19021 973 aa9.64□□□□□ -0.87
UBR3-210ENST00000484596 HOXA5P20719 270 aa9.64□□□□□ -0.87
UBR3-210ENST00000484596 TAF7LQ5H9L4 462 aa9.64□□□□□ -0.87
UBR3-210ENST00000484596 FAM209AQ5JX71 171 aa9.64□□□□□ -0.87
UBR3-210ENST00000484596 ACBD5Q5T8D3 534 aaPredicted RBP9.64□□□□□ -0.87
UBR3-210ENST00000484596 YOD1Q5VVQ6 348 aaPredicted RBP9.64□□□□□ -0.87
UBR3-210ENST00000484596 C16orf86Q6ZW13 317 aa9.64□□□□□ -0.87
UBR3-210ENST00000484596 TMEM145Q8NBT3 493 aa9.64□□□□□ -0.87
UBR3-210ENST00000484596 OSBP2Q969R2 916 aa9.64□□□□□ -0.87
UBR3-210ENST00000484596 EXOC2Q96KP1 924 aa9.64□□□□□ -0.87
UBR3-210ENST00000484596 ZCCHC4Q9H5U6 513 aa9.64□□□□□ -0.87
UBR3-210ENST00000484596 KANSL2Q9H9L4 492 aa9.64□□□□□ -0.87
UBR3-210ENST00000484596 PLA2G2DQ9UNK4 145 aa9.64□□□□□ -0.87
UBR3-210ENST00000484596 ZC3H12DA2A288 527 aaKnown RBP9.63□□□□□ -0.87
UBR3-210ENST00000484596 TRIM13O60858 407 aa9.63□□□□□ -0.87
UBR3-210ENST00000484596 PPP1R11O60927 126 aaPredicted RBP9.63□□□□□ -0.87
UBR3-210ENST00000484596 THBDP07204 575 aa9.63□□□□□ -0.87
UBR3-210ENST00000484596 PRR5P85299 388 aa9.63□□□□□ -0.87
UBR3-210ENST00000484596 VMACQ2NL98 169 aa9.63□□□□□ -0.87
UBR3-210ENST00000484596 FOXB2Q5VYV0 432 aa9.63□□□□□ -0.87
UBR3-210ENST00000484596 MARCH10Q8NA82 808 aaPredicted RBP9.63□□□□□ -0.87
UBR3-210ENST00000484596 KCNC2Q96PR1 638 aa9.63□□□□□ -0.87
UBR3-210ENST00000484596 GLI4P10075 376 aa9.62□□□□□ -0.87
UBR3-210ENST00000484596 IGFBP6P24592 240 aaPredicted RBP9.62□□□□□ -0.87
UBR3-210ENST00000484596 SF1Q15637 639 aaKnown RBP9.62□□□□□ -0.87
UBR3-210ENST00000484596 PLEKHG4Q58EX7 1191 aa9.62□□□□□ -0.87
UBR3-210ENST00000484596 SLC35F1Q5T1Q4 408 aa9.62□□□□□ -0.87
UBR3-210ENST00000484596 NPLOC4Q8TAT6 608 aa9.62□□□□□ -0.87
UBR3-210ENST00000484596 C20orf173Q96LM9 149 aa9.62□□□□□ -0.87
UBR3-210ENST00000484596 PWWP2AQ96N64 755 aa9.62□□□□□ -0.87
UBR3-210ENST00000484596 MMP19Q99542 508 aa9.62□□□□□ -0.87
UBR3-210ENST00000484596 GPRC5CQ9NQ84 441 aa9.62□□□□□ -0.87
UBR3-210ENST00000484596 FBLN5Q9UBX5 448 aa9.62□□□□□ -0.87
UBR3-210ENST00000484596 RWDD3Q9Y3V2 267 aa9.62□□□□□ -0.87
UBR3-210ENST00000484596 NPHP3-ACAD11A0A0J9YXS1 232 aa9.61□□□□□ -0.87
UBR3-210ENST00000484596 MEFVO15553 781 aaPredicted RBP9.61□□□□□ -0.87
UBR3-210ENST00000484596 FBLN1P23142 703 aa9.61□□□□□ -0.87
UBR3-210ENST00000484596 TESK1Q15569 626 aa9.61□□□□□ -0.87
UBR3-210ENST00000484596 LZTR1Q8N653 840 aa9.61□□□□□ -0.87
UBR3-210ENST00000484596 KREMEN2Q8NCW0 462 aa9.61□□□□□ -0.87
UBR3-210ENST00000484596 FRS2Q8WU20 508 aa9.61□□□□□ -0.87
UBR3-210ENST00000484596 DCAF4Q8WV16 495 aa9.61□□□□□ -0.87
UBR3-210ENST00000484596 C1orf159Q96HA4 380 aa9.61□□□□□ -0.87
UBR3-210ENST00000484596 RXFP1Q9HBX9 757 aa9.61□□□□□ -0.87
UBR3-210ENST00000484596 DBR1Q9UK59 544 aaKnown RBP9.61□□□□□ -0.87
UBR3-210ENST00000484596 ASMTLO95671 621 aa9.6□□□□□ -0.87
UBR3-210ENST00000484596 APPP05067 770 aa9.6□□□□□ -0.87
UBR3-210ENST00000484596 PLS3P13797 630 aa9.6□□□□□ -0.87
UBR3-210ENST00000484596 PFKLP17858 780 aa9.6□□□□□ -0.87
UBR3-210ENST00000484596 GABREP78334 506 aa9.6□□□□□ -0.87
UBR3-210ENST00000484596 CYP4F3Q08477 520 aa9.6□□□□□ -0.87
UBR3-210ENST00000484596 KCNAB2Q13303 367 aa9.6□□□□□ -0.87
UBR3-210ENST00000484596 RSPO2Q6UXX9 243 aaPredicted RBP9.6□□□□□ -0.87
UBR3-210ENST00000484596 PPIL6Q8IXY8 311 aa9.6□□□□□ -0.87
UBR3-210ENST00000484596 FEZ1Q99689 392 aa9.6□□□□□ -0.87
UBR3-210ENST00000484596 MRPL4Q9BYD3 311 aaKnown RBP9.6□□□□□ -0.87
UBR3-210ENST00000484596 SLKQ9H2G2 1235 aaPredicted RBP9.6□□□□□ -0.87
UBR3-210ENST00000484596 CLEC1BQ9P126 229 aa9.6□□□□□ -0.87
UBR3-210ENST00000484596 GULP1Q9UBP9 304 aa9.6□□□□□ -0.87
UBR3-210ENST00000484596 PLD2O14939 933 aa9.59□□□□□ -0.87
UBR3-210ENST00000484596 EFCAB14O75071 495 aa9.59□□□□□ -0.87
UBR3-210ENST00000484596 HMGB1P09429 215 aaKnown RBP9.59□□□□□ -0.87
UBR3-210ENST00000484596 LIMS1P48059 325 aa9.59□□□□□ -0.87
UBR3-210ENST00000484596 CTSWP56202 376 aa9.59□□□□□ -0.87
UBR3-210ENST00000484596 TARBP2Q15633 366 aaKnown RBP9.59□□□□□ -0.87
UBR3-210ENST00000484596 PRSS53Q2L4Q9 553 aa9.59□□□□□ -0.87
UBR3-210ENST00000484596 EGFLAMQ63HQ2 1017 aa9.59□□□□□ -0.87
UBR3-210ENST00000484596 USP53Q70EK8 1073 aa9.59□□□□□ -0.87
UBR3-210ENST00000484596 MAMDC2Q7Z304 686 aaPredicted RBP9.59□□□□□ -0.87
UBR3-210ENST00000484596 DIO2Q92813 273 aa9.59□□□□□ -0.87
UBR3-210ENST00000484596 PTPRN2Q92932 1015 aa9.59□□□□□ -0.87
UBR3-210ENST00000484596 PUS7Q96PZ0 661 aaKnown RBP9.59□□□□□ -0.87
UBR3-210ENST00000484596 ZFYVE21Q9BQ24 234 aa9.59□□□□□ -0.87
UBR3-210ENST00000484596 MTA3Q9BTC8 594 aa9.59□□□□□ -0.87
UBR3-210ENST00000484596 NCOA5Q9HCD5 579 aaKnown RBP9.59□□□□□ -0.87
UBR3-210ENST00000484596 C7orf72A4D263 438 aa9.58□□□□□ -0.88
UBR3-210ENST00000484596 ATF2P15336 505 aa9.58□□□□□ -0.88
UBR3-210ENST00000484596 NAT1P18440 290 aa9.58□□□□□ -0.88
UBR3-210ENST00000484596 LTBRP36941 435 aa9.58□□□□□ -0.88
UBR3-210ENST00000484596 FNDC3BQ53EP0 1204 aaKnown RBP9.58□□□□□ -0.88
UBR3-210ENST00000484596 KIAA0907Q7Z7F0 614 aaPredicted RBP9.58□□□□□ -0.88
UBR3-210ENST00000484596 CABP7Q86V35 215 aa9.58□□□□□ -0.88
UBR3-210ENST00000484596 TMX1Q9H3N1 280 aa9.58□□□□□ -0.88
UBR3-210ENST00000484596 NPFFR2Q9Y5X5 522 aa9.58□□□□□ -0.88
UBR3-210ENST00000484596 RFPL3O75679 317 aa9.57□□□□□ -0.88
UBR3-210ENST00000484596 GPR27Q9NS67 375 aa9.57□□□□□ -0.88
UBR3-210ENST00000484596 AQP7O14520 342 aa9.56□□□□□ -0.88
UBR3-210ENST00000484596 NPHS1O60500 1241 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms