RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 PRR16Q569H4 304 aa15.8■□□□□ 0.12
CLK3-204ENST00000483723 SAMD1Q6SPF0 538 aaPredicted RBP15.8■□□□□ 0.12
CLK3-204ENST00000483723 RASSF8Q8NHQ8 419 aa15.8■□□□□ 0.12
CLK3-204ENST00000483723 ATG4CQ96DT6 458 aa15.8■□□□□ 0.12
CLK3-204ENST00000483723 MRFAP1L1Q96HT8 127 aa15.8■□□□□ 0.12
CLK3-204ENST00000483723 MED15Q96RN5 788 aa15.8■□□□□ 0.12
CLK3-204ENST00000483723 PLIN2Q99541 437 aa15.8■□□□□ 0.12
CLK3-204ENST00000483723 TRIM5Q9C035 493 aa15.8■□□□□ 0.12
CLK3-204ENST00000483723 TAF1DQ9H5J8 278 aaPredicted RBP15.8■□□□□ 0.12
CLK3-204ENST00000483723 RMND1Q9NWS8 449 aa15.8■□□□□ 0.12
CLK3-204ENST00000483723 TMOD4Q9NZQ9 345 aa15.8■□□□□ 0.12
CLK3-204ENST00000483723 COL11A1P12107 1806 aaPredicted RBP15.79■□□□□ 0.12
CLK3-204ENST00000483723 ATP2A1O14983 1001 aa15.79■□□□□ 0.12
CLK3-204ENST00000483723 MSH4O15457 936 aa15.79■□□□□ 0.12
CLK3-204ENST00000483723 MARCH6O60337 910 aa15.79■□□□□ 0.12
CLK3-204ENST00000483723 IREB2P48200 963 aaKnown RBP15.79■□□□□ 0.12
CLK3-204ENST00000483723 PRKG1Q13976 671 aa15.79■□□□□ 0.12
CLK3-204ENST00000483723 CNNM4Q6P4Q7 775 aa15.79■□□□□ 0.12
CLK3-204ENST00000483723 CPXCR1Q8N123 301 aa15.79■□□□□ 0.12
CLK3-204ENST00000483723 GJA10Q969M2 543 aa15.79■□□□□ 0.12
CLK3-204ENST00000483723 CDCA5Q96FF9 252 aa15.79■□□□□ 0.12
CLK3-204ENST00000483723 RBBP6Q7Z6E9 1792 aaKnown RBP15.78■□□□□ 0.12
CLK3-204ENST00000483723 FRMPD4Q14CM0 1322 aa15.78■□□□□ 0.12
CLK3-204ENST00000483723 NFIBO00712 420 aa15.78■□□□□ 0.12
CLK3-204ENST00000483723 ALAS1P13196 640 aa15.78■□□□□ 0.12
CLK3-204ENST00000483723 CD44P16070 742 aaKnown RBP15.78■□□□□ 0.12
CLK3-204ENST00000483723 TPM4P67936 248 aa15.78■□□□□ 0.12
CLK3-204ENST00000483723 AMPD3Q01432 767 aa15.78■□□□□ 0.12
CLK3-204ENST00000483723 FMR1Q06787 632 aaKnown RBP eCLIP15.78■□□□□ 0.12
CLK3-204ENST00000483723 MUM1L1Q5H9M0 696 aa15.78■□□□□ 0.12
CLK3-204ENST00000483723 ZNF658Q5TYW1 1059 aaPredicted RBP15.78■□□□□ 0.12
CLK3-204ENST00000483723 CYP2W1Q8TAV3 490 aa15.78■□□□□ 0.12
CLK3-204ENST00000483723 SNX29Q8TEQ0 813 aa15.78■□□□□ 0.12
CLK3-204ENST00000483723 TRIM9Q9C026 710 aa15.78■□□□□ 0.12
CLK3-204ENST00000483723 MAF1Q9H063 256 aa15.78■□□□□ 0.12
CLK3-204ENST00000483723 COL20A1Q9P218 1284 aa15.78■□□□□ 0.12
CLK3-204ENST00000483723 IQCA1LA6NCM1 817 aa15.77■□□□□ 0.12
CLK3-204ENST00000483723 MEIS1O00470 390 aa15.77■□□□□ 0.12
CLK3-204ENST00000483723 RHOBTB3O94955 611 aa15.77■□□□□ 0.12
CLK3-204ENST00000483723 ZNF76P36508 570 aa15.77■□□□□ 0.12
CLK3-204ENST00000483723 ECM1Q16610 540 aa15.77■□□□□ 0.12
CLK3-204ENST00000483723 SYTL5Q8TDW5 730 aaPredicted RBP15.77■□□□□ 0.12
CLK3-204ENST00000483723 WNK4Q96J92 1243 aa15.77■□□□□ 0.12
CLK3-204ENST00000483723 HOXC10Q9NYD6 342 aa15.77■□□□□ 0.12
CLK3-204ENST00000483723 CSADQ9Y600 493 aa15.77■□□□□ 0.12
CLK3-204ENST00000483723 STK24Q9Y6E0 443 aa15.77■□□□□ 0.12
CLK3-204ENST00000483723 KDM3AQ9Y4C1 1321 aa15.77■□□□□ 0.11
CLK3-204ENST00000483723 NF2P35240 595 aa15.77■□□□□ 0.11
CLK3-204ENST00000483723 PPATQ06203 517 aa15.77■□□□□ 0.11
CLK3-204ENST00000483723 CEP55Q53EZ4 464 aa15.77■□□□□ 0.11
CLK3-204ENST00000483723 SV2BQ7L1I2 683 aa15.77■□□□□ 0.11
CLK3-204ENST00000483723 ANKRD13AQ8IZ07 590 aa15.77■□□□□ 0.11
CLK3-204ENST00000483723 RAD54LQ92698 747 aa15.77■□□□□ 0.11
CLK3-204ENST00000483723 SLC5A5Q92911 643 aa15.77■□□□□ 0.11
CLK3-204ENST00000483723 NT5C3AQ9H0P0 336 aa15.77■□□□□ 0.11
CLK3-204ENST00000483723 VAV3Q9UKW4 847 aa15.77■□□□□ 0.11
CLK3-204ENST00000483723 ZNF214Q9UL59 606 aaPredicted RBP15.77■□□□□ 0.11
CLK3-204ENST00000483723 CTDP1Q9Y5B0 961 aaPredicted RBP15.77■□□□□ 0.11
CLK3-204ENST00000483723 KMT5BQ4FZB7 885 aa15.76■□□□□ 0.11
CLK3-204ENST00000483723 NIPA1Q7RTP0 329 aa15.76■□□□□ 0.11
CLK3-204ENST00000483723 KCNK18Q7Z418 384 aa15.76■□□□□ 0.11
CLK3-204ENST00000483723 PNMA8AQ86V59 439 aaPredicted RBP15.76■□□□□ 0.11
CLK3-204ENST00000483723 LARP4BQ92615 738 aaKnown RBP15.76■□□□□ 0.11
CLK3-204ENST00000483723 CDK5RAP3Q96JB5 506 aa15.76■□□□□ 0.11
CLK3-204ENST00000483723 TRERF1Q96PN7 1200 aa15.76■□□□□ 0.11
CLK3-204ENST00000483723 GTPBP4Q9BZE4 634 aaKnown RBP15.76■□□□□ 0.11
CLK3-204ENST00000483723 FANCLQ9NW38 375 aa15.76■□□□□ 0.11
CLK3-204ENST00000483723 RIPK3Q9Y572 518 aa15.76■□□□□ 0.11
CLK3-204ENST00000483723 LOC285556D6RIA3 1793 aa15.76■□□□□ 0.11
CLK3-204ENST00000483723 CXCL11O14625 94 aa15.75■□□□□ 0.11
CLK3-204ENST00000483723 PSMD10O75832 226 aa15.75■□□□□ 0.11
CLK3-204ENST00000483723 BCRP11274 1271 aa15.75■□□□□ 0.11
CLK3-204ENST00000483723 ZNF18P17022 549 aa15.75■□□□□ 0.11
CLK3-204ENST00000483723 CCT6AP40227 531 aaKnown RBP15.75■□□□□ 0.11
CLK3-204ENST00000483723 TKFCQ3LXA3 575 aa15.75■□□□□ 0.11
CLK3-204ENST00000483723 ERO1BQ86YB8 467 aa15.75■□□□□ 0.11
CLK3-204ENST00000483723 KCTD17Q8N5Z5 321 aa15.75■□□□□ 0.11
CLK3-204ENST00000483723 MXRA8Q9BRK3 442 aa15.75■□□□□ 0.11
CLK3-204ENST00000483723 LRRC27Q9C0I9 530 aa15.75■□□□□ 0.11
CLK3-204ENST00000483723 PVALEFA0A1B0GWK0 134 aa15.74■□□□□ 0.11
CLK3-204ENST00000483723 MYMKA6NI61 221 aa15.74■□□□□ 0.11
CLK3-204ENST00000483723 SPDYE5A6NIY4 337 aa15.74■□□□□ 0.11
CLK3-204ENST00000483723 SPDYE16A6NNV3 312 aaPredicted RBP15.74■□□□□ 0.11
CLK3-204ENST00000483723 ESPNB1AK53 854 aa15.74■□□□□ 0.11
CLK3-204ENST00000483723 RPA1P27694 616 aa15.74■□□□□ 0.11
CLK3-204ENST00000483723 HOXA7P31268 230 aaPredicted RBP15.74■□□□□ 0.11
CLK3-204ENST00000483723 RPS6P62753 249 aaKnown RBP15.74■□□□□ 0.11
CLK3-204ENST00000483723 FANCCQ00597 558 aa15.74■□□□□ 0.11
CLK3-204ENST00000483723 MCM6Q14566 821 aa15.74■□□□□ 0.11
CLK3-204ENST00000483723 TMEM132BQ14DG7 1078 aa15.74■□□□□ 0.11
CLK3-204ENST00000483723 SPATA1Q5VX52 437 aa15.74■□□□□ 0.11
CLK3-204ENST00000483723 OTOP1Q7RTM1 612 aa15.74■□□□□ 0.11
CLK3-204ENST00000483723 ZSCAN30Q86W11 494 aa15.74■□□□□ 0.11
CLK3-204ENST00000483723 GIMAP8Q8ND71 665 aaPredicted RBP15.74■□□□□ 0.11
CLK3-204ENST00000483723 CNKSR2Q8WXI2 1034 aa15.74■□□□□ 0.11
CLK3-204ENST00000483723 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.74■□□□□ 0.11
CLK3-204ENST00000483723 KCNH4Q9UQ05 1017 aa15.74■□□□□ 0.11
CLK3-204ENST00000483723 UBIAD1Q9Y5Z9 338 aa15.74■□□□□ 0.11
CLK3-204ENST00000483723 A0A0G2JLL6 359 aaPredicted RBP15.74■□□□□ 0.11
CLK3-204ENST00000483723 MED24O75448 989 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms