RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 CHST13Q8NET6 341 aa11.42□□□□□ -0.58
HDAC6-226ENST00000483656 UIMC1Q96RL1 719 aa11.42□□□□□ -0.58
HDAC6-226ENST00000483656 PTPN18Q99952 460 aa11.42□□□□□ -0.58
HDAC6-226ENST00000483656 SDF4Q9BRK5 362 aa11.42□□□□□ -0.58
HDAC6-226ENST00000483656 SPATC1LQ9H0A9 340 aa11.42□□□□□ -0.58
HDAC6-226ENST00000483656 RBSNQ9H1K0 784 aa11.42□□□□□ -0.58
HDAC6-226ENST00000483656 ACAD9Q9H845 621 aa11.42□□□□□ -0.58
HDAC6-226ENST00000483656 EHMT1Q9H9B1 1298 aa11.42□□□□□ -0.58
HDAC6-226ENST00000483656 A1CFQ9NQ94 594 aaKnown RBP11.42□□□□□ -0.58
HDAC6-226ENST00000483656 CYP39A1Q9NYL5 469 aa11.42□□□□□ -0.58
HDAC6-226ENST00000483656 MEIS1O00470 390 aa11.41□□□□□ -0.58
HDAC6-226ENST00000483656 TBX3O15119 743 aa11.41□□□□□ -0.58
HDAC6-226ENST00000483656 PRR29P0C7W0 189 aa11.41□□□□□ -0.58
HDAC6-226ENST00000483656 ZBTB48P10074 688 aaPredicted RBP11.41□□□□□ -0.58
HDAC6-226ENST00000483656 CYP2C8P10632 490 aa11.41□□□□□ -0.58
HDAC6-226ENST00000483656 MRPS9P82933 396 aaKnown RBP11.41□□□□□ -0.58
HDAC6-226ENST00000483656 PDIA5Q14554 519 aa11.41□□□□□ -0.58
HDAC6-226ENST00000483656 KARSQ15046 597 aaKnown RBP11.41□□□□□ -0.58
HDAC6-226ENST00000483656 PDXDC2PQ6P474 469 aa11.41□□□□□ -0.58
HDAC6-226ENST00000483656 ANKRD23Q86SG2 305 aa11.41□□□□□ -0.58
HDAC6-226ENST00000483656 RASAL3Q86YV0 1011 aa11.41□□□□□ -0.58
HDAC6-226ENST00000483656 DNAJC5GQ8N7S2 189 aa11.41□□□□□ -0.58
HDAC6-226ENST00000483656 CNNM3Q8NE01 707 aa11.41□□□□□ -0.58
HDAC6-226ENST00000483656 DHX58Q96C10 678 aa11.41□□□□□ -0.58
HDAC6-226ENST00000483656 AK8Q96MA6 479 aa11.41□□□□□ -0.58
HDAC6-226ENST00000483656 NUDT12Q9BQG2 462 aa11.41□□□□□ -0.58
HDAC6-226ENST00000483656 PAGR1Q9BTK6 254 aa11.41□□□□□ -0.58
HDAC6-226ENST00000483656 MOV10L1Q9BXT6 1211 aaKnown RBP11.41□□□□□ -0.58
HDAC6-226ENST00000483656 MAF1Q9H063 256 aa11.41□□□□□ -0.58
HDAC6-226ENST00000483656 TSPY26PQ9H489 355 aa11.41□□□□□ -0.58
HDAC6-226ENST00000483656 TTC12Q9H892 705 aaPredicted RBP11.41□□□□□ -0.58
HDAC6-226ENST00000483656 PXMP2Q9NR77 195 aa11.41□□□□□ -0.58
HDAC6-226ENST00000483656 SLC45A1Q9Y2W3 748 aa11.41□□□□□ -0.58
HDAC6-226ENST00000483656 RABGAP1Q9Y3P9 1069 aa11.41□□□□□ -0.58
HDAC6-226ENST00000483656 UBIAD1Q9Y5Z9 338 aa11.41□□□□□ -0.58
HDAC6-226ENST00000483656 A0A087WWV3 80 aa11.4□□□□□ -0.58
HDAC6-226ENST00000483656 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.4□□□□□ -0.58
HDAC6-226ENST00000483656 TESPA1A2RU30 521 aaPredicted RBP11.4□□□□□ -0.58
HDAC6-226ENST00000483656 GOLGA6L3A6NEY3 463 aa11.4□□□□□ -0.58
HDAC6-226ENST00000483656 POTEMA6NI47 508 aa11.4□□□□□ -0.58
HDAC6-226ENST00000483656 PDHXO00330 501 aa11.4□□□□□ -0.58
HDAC6-226ENST00000483656 SLFN14P0C7P3 912 aa11.4□□□□□ -0.58
HDAC6-226ENST00000483656 ARP10275 920 aa11.4□□□□□ -0.58
HDAC6-226ENST00000483656 ITGB5P18084 799 aa11.4□□□□□ -0.58
HDAC6-226ENST00000483656 EIF2AK2P19525 551 aaKnown RBP11.4□□□□□ -0.58
HDAC6-226ENST00000483656 ZNF76P36508 570 aa11.4□□□□□ -0.58
HDAC6-226ENST00000483656 TYRO3Q06418 890 aa11.4□□□□□ -0.58
HDAC6-226ENST00000483656 SPIRE1Q08AE8 756 aa11.4□□□□□ -0.58
HDAC6-226ENST00000483656 PGM5Q15124 567 aa11.4□□□□□ -0.58
HDAC6-226ENST00000483656 CEP55Q53EZ4 464 aa11.4□□□□□ -0.58
HDAC6-226ENST00000483656 NAALADL2Q58DX5 795 aa11.4□□□□□ -0.58
HDAC6-226ENST00000483656 PCNX4Q63HM2 1172 aa11.4□□□□□ -0.58
HDAC6-226ENST00000483656 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.4□□□□□ -0.58
HDAC6-226ENST00000483656 SAPCD2Q86UD0 394 aa11.4□□□□□ -0.58
HDAC6-226ENST00000483656 CABP7Q86V35 215 aa11.4□□□□□ -0.58
HDAC6-226ENST00000483656 PLA2G4DQ86XP0 818 aa11.4□□□□□ -0.58
HDAC6-226ENST00000483656 GRAMD1CQ8IYS0 662 aa11.4□□□□□ -0.58
HDAC6-226ENST00000483656 FAM43AQ8N2R8 423 aa11.4□□□□□ -0.58
HDAC6-226ENST00000483656 PNMA5Q96PV4 448 aa11.4□□□□□ -0.58
HDAC6-226ENST00000483656 RMDN3Q96TC7 470 aa11.4□□□□□ -0.58
HDAC6-226ENST00000483656 MTRQ99707 1265 aa11.4□□□□□ -0.58
HDAC6-226ENST00000483656 MXRA8Q9BRK3 442 aa11.4□□□□□ -0.58
HDAC6-226ENST00000483656 PDCD2LQ9BRP1 358 aa11.4□□□□□ -0.58
HDAC6-226ENST00000483656 KIAA1468Q9P260 1216 aa11.4□□□□□ -0.58
HDAC6-226ENST00000483656 LRWD1Q9UFC0 647 aa11.4□□□□□ -0.58
HDAC6-226ENST00000483656 TUBE1Q9UJT0 475 aa11.4□□□□□ -0.58
HDAC6-226ENST00000483656 ASTN1O14525 1302 aa11.39□□□□□ -0.59
HDAC6-226ENST00000483656 LCTP09848 1927 aa11.39□□□□□ -0.59
HDAC6-226ENST00000483656 ERCC3P19447 782 aa11.39□□□□□ -0.59
HDAC6-226ENST00000483656 UBA7P41226 1012 aa11.39□□□□□ -0.59
HDAC6-226ENST00000483656 GRB10Q13322 594 aa11.39□□□□□ -0.59
HDAC6-226ENST00000483656 PNOCQ13519 176 aa11.39□□□□□ -0.59
HDAC6-226ENST00000483656 TMEM266Q2M3C6 531 aa11.39□□□□□ -0.59
HDAC6-226ENST00000483656 NIPA1Q7RTP0 329 aa11.39□□□□□ -0.59
HDAC6-226ENST00000483656 SLFN12Q8IYM2 578 aa11.39□□□□□ -0.59
HDAC6-226ENST00000483656 SLC5A5Q92911 643 aa11.39□□□□□ -0.59
HDAC6-226ENST00000483656 PAGE5Q96GU1 130 aa11.39□□□□□ -0.59
HDAC6-226ENST00000483656 FAM20AQ96MK3 541 aa11.39□□□□□ -0.59
HDAC6-226ENST00000483656 PLIN2Q99541 437 aa11.39□□□□□ -0.59
HDAC6-226ENST00000483656 DISC1Q9NRI5 854 aa11.39□□□□□ -0.59
HDAC6-226ENST00000483656 USP25Q9UHP3 1055 aa11.39□□□□□ -0.59
HDAC6-226ENST00000483656 VAV3Q9UKW4 847 aa11.39□□□□□ -0.59
HDAC6-226ENST00000483656 PCDHA12Q9UN75 941 aa11.39□□□□□ -0.59
HDAC6-226ENST00000483656 MARCH6O60337 910 aa11.38□□□□□ -0.59
HDAC6-226ENST00000483656 PSMD10O75832 226 aa11.38□□□□□ -0.59
HDAC6-226ENST00000483656 SLC25A27O95847 323 aa11.38□□□□□ -0.59
HDAC6-226ENST00000483656 CCDC192P0DO97 292 aa11.38□□□□□ -0.59
HDAC6-226ENST00000483656 BCRP11274 1271 aa11.38□□□□□ -0.59
HDAC6-226ENST00000483656 PLCG1P19174 1290 aa11.38□□□□□ -0.59
HDAC6-226ENST00000483656 CASP1P29466 404 aa11.38□□□□□ -0.59
HDAC6-226ENST00000483656 TXLNAP40222 546 aa11.38□□□□□ -0.59
HDAC6-226ENST00000483656 SARSP49591 514 aaKnown RBP11.38□□□□□ -0.59
HDAC6-226ENST00000483656 ZNF157P51786 506 aaPredicted RBP11.38□□□□□ -0.59
HDAC6-226ENST00000483656 CNTN2Q02246 1040 aa11.38□□□□□ -0.59
HDAC6-226ENST00000483656 POSTNQ15063 836 aa11.38□□□□□ -0.59
HDAC6-226ENST00000483656 ECM1Q16610 540 aa11.38□□□□□ -0.59
HDAC6-226ENST00000483656 ARHGEF16Q5VV41 709 aa11.38□□□□□ -0.59
HDAC6-226ENST00000483656 RRAGBQ5VZM2 374 aa11.38□□□□□ -0.59
HDAC6-226ENST00000483656 RGMBQ6NW40 437 aa11.38□□□□□ -0.59
HDAC6-226ENST00000483656 B3GNT9Q6UX72 402 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms