RNA–Protein interactions for RNA: ENST00000483448.1

SYPL1-206, Transcript of synaptophysin like 1, humanhuman

TSL 4

Gene SYPL1, Length 478 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-206ENST00000483448 IL23AQ9NPF7 189 aa24.9■■□□□ 1.58
SYPL1-206ENST00000483448 SEC63Q9UGP8 760 aaKnown RBP24.9■■□□□ 1.58
SYPL1-206ENST00000483448 DDX41Q9UJV9 622 aaKnown RBP24.9■■□□□ 1.58
SYPL1-206ENST00000483448 UMODL1Q5DID0 1318 aa24.89■■□□□ 1.58
SYPL1-206ENST00000483448 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.89■■□□□ 1.58
SYPL1-206ENST00000483448 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.89■■□□□ 1.58
SYPL1-206ENST00000483448 CDC45O75419 566 aa24.89■■□□□ 1.58
SYPL1-206ENST00000483448 CALM1P0DP23 149 aa24.89■■□□□ 1.58
SYPL1-206ENST00000483448 CALM2P0DP24 149 aa24.89■■□□□ 1.58
SYPL1-206ENST00000483448 CALM3P0DP25 149 aa24.89■■□□□ 1.58
SYPL1-206ENST00000483448 CYP2C9P11712 490 aa24.89■■□□□ 1.58
SYPL1-206ENST00000483448 RXRAP19793 462 aa24.89■■□□□ 1.58
SYPL1-206ENST00000483448 CASTP20810 708 aaKnown RBP24.89■■□□□ 1.58
SYPL1-206ENST00000483448 CCND2P30279 289 aa24.89■■□□□ 1.58
SYPL1-206ENST00000483448 ARHGAP1Q07960 439 aa24.89■■□□□ 1.58
SYPL1-206ENST00000483448 PGM5Q15124 567 aa24.89■■□□□ 1.58
SYPL1-206ENST00000483448 PSRC1Q6PGN9 363 aaPredicted RBP24.89■■□□□ 1.58
SYPL1-206ENST00000483448 RAB11FIP4Q86YS3 637 aa24.89■■□□□ 1.58
SYPL1-206ENST00000483448 DHX37Q8IY37 1157 aaKnown RBP24.89■■□□□ 1.58
SYPL1-206ENST00000483448 SPZ1Q9BXG8 430 aa24.89■■□□□ 1.58
SYPL1-206ENST00000483448 STXBP5LQ9Y2K9 1186 aa24.89■■□□□ 1.58
SYPL1-206ENST00000483448 SLC12A7Q9Y666 1083 aa24.89■■□□□ 1.58
SYPL1-206ENST00000483448 MMP3P08254 477 aa24.88■■□□□ 1.57
SYPL1-206ENST00000483448 LIFRP42702 1097 aa24.88■■□□□ 1.57
SYPL1-206ENST00000483448 COL9A3Q14050 684 aaPredicted RBP24.88■■□□□ 1.57
SYPL1-206ENST00000483448 NFRKBQ6P4R8 1299 aa24.88■■□□□ 1.57
SYPL1-206ENST00000483448 SYNE3Q6ZMZ3 975 aa24.88■■□□□ 1.57
SYPL1-206ENST00000483448 VSIG10LQ86VR7 867 aa24.88■■□□□ 1.57
SYPL1-206ENST00000483448 ZFP91Q96JP5 570 aaPredicted RBP24.88■■□□□ 1.57
SYPL1-206ENST00000483448 NOD1Q9Y239 953 aa24.88■■□□□ 1.57
SYPL1-206ENST00000483448 SORBS3O60504 671 aa24.87■■□□□ 1.57
SYPL1-206ENST00000483448 FGBP02675 491 aa24.87■■□□□ 1.57
SYPL1-206ENST00000483448 SMARCA1P28370 1054 aa24.87■■□□□ 1.57
SYPL1-206ENST00000483448 LAMC2Q13753 1193 aa24.87■■□□□ 1.57
SYPL1-206ENST00000483448 DGKDQ16760 1214 aa24.87■■□□□ 1.57
SYPL1-206ENST00000483448 KCNV1Q6PIU1 500 aa24.87■■□□□ 1.57
SYPL1-206ENST00000483448 CMTR1Q8N1G2 835 aaKnown RBP24.87■■□□□ 1.57
SYPL1-206ENST00000483448 SRBD1Q8N5C6 995 aaKnown RBP24.87■■□□□ 1.57
SYPL1-206ENST00000483448 SLC17A8Q8NDX2 589 aa24.87■■□□□ 1.57
SYPL1-206ENST00000483448 CUL5Q93034 780 aa24.87■■□□□ 1.57
SYPL1-206ENST00000483448 SEMA6BQ9H3T3 888 aa24.87■■□□□ 1.57
SYPL1-206ENST00000483448 PLEKHA8P1O95397 391 aa24.86■■□□□ 1.57
SYPL1-206ENST00000483448 RPUSD2Q8IZ73 545 aaKnown RBP24.86■■□□□ 1.57
SYPL1-206ENST00000483448 CCDC82Q8N4S0 544 aa24.86■■□□□ 1.57
SYPL1-206ENST00000483448 IL31RAQ8NI17 732 aa24.86■■□□□ 1.57
SYPL1-206ENST00000483448 SMARCC2Q8TAQ2 1214 aa24.86■■□□□ 1.57
SYPL1-206ENST00000483448 SCLYQ96I15 445 aa24.86■■□□□ 1.57
SYPL1-206ENST00000483448 NEK1Q96PY6 1258 aa24.86■■□□□ 1.57
SYPL1-206ENST00000483448 MTIF3Q9H2K0 278 aaKnown RBP24.86■■□□□ 1.57
SYPL1-206ENST00000483448 PTPN11Q06124 597 aaPredicted RBP24.85■■□□□ 1.57
SYPL1-206ENST00000483448 RETREG2Q8NC44 543 aa24.85■■□□□ 1.57
SYPL1-206ENST00000483448 GUCD1Q96NT3 240 aa24.85■■□□□ 1.57
SYPL1-206ENST00000483448 RGS20O76081 388 aa24.84■■□□□ 1.57
SYPL1-206ENST00000483448 OTOP2Q7RTS6 562 aa24.84■■□□□ 1.57
SYPL1-206ENST00000483448 FANCBQ8NB91 859 aa24.84■■□□□ 1.57
SYPL1-206ENST00000483448 EMID1Q96A84 441 aaPredicted RBP24.84■■□□□ 1.57
SYPL1-206ENST00000483448 WNT8AQ9H1J5 351 aa24.84■■□□□ 1.57
SYPL1-206ENST00000483448 GGPS1O95749 300 aa24.83■■□□□ 1.57
SYPL1-206ENST00000483448 MICU3Q86XE3 530 aa24.83■■□□□ 1.57
SYPL1-206ENST00000483448 PPTC7Q8NI37 304 aa24.83■■□□□ 1.57
SYPL1-206ENST00000483448 HERVK_113Q902F9 699 aa24.83■■□□□ 1.57
SYPL1-206ENST00000483448 SPATA33Q96N06 139 aa24.83■■□□□ 1.57
SYPL1-206ENST00000483448 ALG1Q9BT22 464 aa24.83■■□□□ 1.57
SYPL1-206ENST00000483448 MLXIPQ9HAP2 919 aa24.83■■□□□ 1.57
SYPL1-206ENST00000483448 hCG_1642624A0A1W2PR95 340 aa24.82■■□□□ 1.56
SYPL1-206ENST00000483448 TGFB3P10600 412 aa24.82■■□□□ 1.56
SYPL1-206ENST00000483448 DNAJB2P25686 324 aa24.82■■□□□ 1.56
SYPL1-206ENST00000483448 PTGISQ16647 500 aa24.82■■□□□ 1.56
SYPL1-206ENST00000483448 CELF3Q5SZQ8 465 aaKnown RBP24.82■■□□□ 1.56
SYPL1-206ENST00000483448 USP17L6PQ6QN14 398 aa24.82■■□□□ 1.56
SYPL1-206ENST00000483448 DEFB128Q7Z7B8 93 aa24.82■■□□□ 1.56
SYPL1-206ENST00000483448 TCEANC2Q96MN5 208 aa24.82■■□□□ 1.56
SYPL1-206ENST00000483448 CDX2Q99626 313 aaPredicted RBP24.82■■□□□ 1.56
SYPL1-206ENST00000483448 TTYH1Q9H313 450 aaPredicted RBP24.82■■□□□ 1.56
SYPL1-206ENST00000483448 RTEL1Q9NZ71 1219 aa24.82■■□□□ 1.56
SYPL1-206ENST00000483448 KIAA1217Q5T5P2 1943 aa24.82■■□□□ 1.56
SYPL1-206ENST00000483448 GRXCR1A8MXD5 290 aa24.81■■□□□ 1.56
SYPL1-206ENST00000483448 PSEN2P49810 448 aa24.81■■□□□ 1.56
SYPL1-206ENST00000483448 KRT32Q14532 448 aa24.81■■□□□ 1.56
SYPL1-206ENST00000483448 GNPTABQ3T906 1256 aa24.81■■□□□ 1.56
SYPL1-206ENST00000483448 MYSM1Q5VVJ2 828 aa24.81■■□□□ 1.56
SYPL1-206ENST00000483448 DHX32Q7L7V1 743 aaKnown RBP24.81■■□□□ 1.56
SYPL1-206ENST00000483448 RASEFQ8IZ41 740 aa24.81■■□□□ 1.56
SYPL1-206ENST00000483448 C7orf31Q8N865 590 aa24.81■■□□□ 1.56
SYPL1-206ENST00000483448 KAT2BQ92831 832 aa24.81■■□□□ 1.56
SYPL1-206ENST00000483448 GPKOWQ92917 476 aaPredicted RBP eCLIP24.81■■□□□ 1.56
SYPL1-206ENST00000483448 KATNAL1Q9BW62 490 aa24.81■■□□□ 1.56
SYPL1-206ENST00000483448 LAMA2P24043 3122 aaKnown RBP24.8■■□□□ 1.56
SYPL1-206ENST00000483448 ZBBXA8MT70 800 aa24.8■■□□□ 1.56
SYPL1-206ENST00000483448 NEFLP07196 543 aa24.8■■□□□ 1.56
SYPL1-206ENST00000483448 ZNF286BP0CG31 522 aa24.8■■□□□ 1.56
SYPL1-206ENST00000483448 SP2Q02086 613 aa24.8■■□□□ 1.56
SYPL1-206ENST00000483448 BFSP2Q13515 415 aa24.8■■□□□ 1.56
SYPL1-206ENST00000483448 RASIP1Q5U651 963 aa24.8■■□□□ 1.56
SYPL1-206ENST00000483448 TMTC3Q6ZXV5 915 aa24.8■■□□□ 1.56
SYPL1-206ENST00000483448 SGMS1Q86VZ5 419 aa24.8■■□□□ 1.56
SYPL1-206ENST00000483448 TIFAQ96CG3 184 aa24.8■■□□□ 1.56
SYPL1-206ENST00000483448 PSTPIP2Q9H939 334 aa24.8■■□□□ 1.56
SYPL1-206ENST00000483448 SCN10AQ9Y5Y9 1956 aa24.8■■□□□ 1.56
SYPL1-206ENST00000483448 TMEM265A0A087WTH1 108 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms