RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 LRRC37A2A6NM11 1700 aa22.72■■□□□ 1.23
TRAPPC12-220ENST00000482645 BRD1O95696 1058 aa22.72■■□□□ 1.23
TRAPPC12-220ENST00000482645 CACNB2Q08289 660 aaPredicted RBP22.72■■□□□ 1.23
TRAPPC12-220ENST00000482645 NONOQ15233 471 aaKnown RBP eCLIP22.72■■□□□ 1.23
TRAPPC12-220ENST00000482645 TBCKQ8TEA7 893 aa22.72■■□□□ 1.23
TRAPPC12-220ENST00000482645 RTEL1Q9NZ71 1219 aa22.72■■□□□ 1.23
TRAPPC12-220ENST00000482645 BRCA2P51587 3418 aa22.71■■□□□ 1.23
TRAPPC12-220ENST00000482645 LOC102724159A0A0B4J2E5 919 aa22.71■■□□□ 1.23
TRAPPC12-220ENST00000482645 FAM205CA6NFA0 338 aa22.71■■□□□ 1.23
TRAPPC12-220ENST00000482645 ZSCAN22P10073 491 aaPredicted RBP22.71■■□□□ 1.23
TRAPPC12-220ENST00000482645 CNGA1P29973 690 aa22.71■■□□□ 1.23
TRAPPC12-220ENST00000482645 SREBF1P36956 1147 aa22.71■■□□□ 1.23
TRAPPC12-220ENST00000482645 ARHGAP4P98171 946 aa22.71■■□□□ 1.23
TRAPPC12-220ENST00000482645 ACVR2BQ13705 512 aa22.71■■□□□ 1.23
TRAPPC12-220ENST00000482645 PWP2Q15269 919 aaKnown RBP22.71■■□□□ 1.23
TRAPPC12-220ENST00000482645 INF2Q27J81 1249 aa22.71■■□□□ 1.23
TRAPPC12-220ENST00000482645 EARS2Q5JPH6 523 aaKnown RBP22.71■■□□□ 1.23
TRAPPC12-220ENST00000482645 COL13A1Q5TAT6 717 aaPredicted RBP22.71■■□□□ 1.23
TRAPPC12-220ENST00000482645 PCNX4Q63HM2 1172 aa22.71■■□□□ 1.23
TRAPPC12-220ENST00000482645 FERMT3Q86UX7 667 aa22.71■■□□□ 1.23
TRAPPC12-220ENST00000482645 MORC4Q8TE76 937 aa22.71■■□□□ 1.23
TRAPPC12-220ENST00000482645 ABHD16BQ9H3Z7 469 aa22.71■■□□□ 1.23
TRAPPC12-220ENST00000482645 ZDHHC9Q9Y397 364 aa22.71■■□□□ 1.23
TRAPPC12-220ENST00000482645 MYH7BA7E2Y1 1941 aa22.7■■□□□ 1.23
TRAPPC12-220ENST00000482645 ZNF76P36508 570 aa22.7■■□□□ 1.22
TRAPPC12-220ENST00000482645 SEPT14Q6ZU15 432 aa22.7■■□□□ 1.22
TRAPPC12-220ENST00000482645 VSIG10LQ86VR7 867 aa22.7■■□□□ 1.22
TRAPPC12-220ENST00000482645 KIF28PB7ZC32 967 aa22.69■■□□□ 1.22
TRAPPC12-220ENST00000482645 EIF3JO75822 258 aaKnown RBP22.69■■□□□ 1.22
TRAPPC12-220ENST00000482645 F13A1P00488 732 aa22.69■■□□□ 1.22
TRAPPC12-220ENST00000482645 IGHA2P01877 340 aa22.69■■□□□ 1.22
TRAPPC12-220ENST00000482645 PDIA4P13667 645 aaKnown RBP22.69■■□□□ 1.22
TRAPPC12-220ENST00000482645 CCND3P30281 292 aaPredicted RBP22.69■■□□□ 1.22
TRAPPC12-220ENST00000482645 MRPS9P82933 396 aaKnown RBP22.69■■□□□ 1.22
TRAPPC12-220ENST00000482645 TRPV1Q8NER1 839 aa22.69■■□□□ 1.22
TRAPPC12-220ENST00000482645 TNFRSF25Q93038 417 aa22.69■■□□□ 1.22
TRAPPC12-220ENST00000482645 FOXP1Q9H334 677 aaPredicted RBP22.69■■□□□ 1.22
TRAPPC12-220ENST00000482645 CYBAP13498 195 aa22.68■■□□□ 1.22
TRAPPC12-220ENST00000482645 VTA1Q9NP79 307 aa22.68■■□□□ 1.22
TRAPPC12-220ENST00000482645 PDGFCQ9NRA1 345 aa22.68■■□□□ 1.22
TRAPPC12-220ENST00000482645 NOSTRINQ8IVI9 506 aa22.67■■□□□ 1.22
TRAPPC12-220ENST00000482645 KATNBL1Q9H079 304 aa22.67■■□□□ 1.22
TRAPPC12-220ENST00000482645 HMX1Q9NP08 348 aaPredicted RBP22.67■■□□□ 1.22
TRAPPC12-220ENST00000482645 ZNF865P0CJ78 1059 aaPredicted RBP22.67■■□□□ 1.22
TRAPPC12-220ENST00000482645 MTFR1Q15390 333 aa22.67■■□□□ 1.22
TRAPPC12-220ENST00000482645 LETM2Q2VYF4 491 aa22.67■■□□□ 1.22
TRAPPC12-220ENST00000482645 CCDC144BQ3MJ40 725 aa22.67■■□□□ 1.22
TRAPPC12-220ENST00000482645 MAP3K21Q5TCX8 1036 aa22.67■■□□□ 1.22
TRAPPC12-220ENST00000482645 XRRA1Q6P2D8 792 aa22.67■■□□□ 1.22
TRAPPC12-220ENST00000482645 ATP2B1P20020 1258 aa22.66■■□□□ 1.22
TRAPPC12-220ENST00000482645 ADCYAP1R1P41586 468 aa22.66■■□□□ 1.22
TRAPPC12-220ENST00000482645 RESTQ13127 1097 aa22.66■■□□□ 1.22
TRAPPC12-220ENST00000482645 ANO1Q5XXA6 986 aa22.66■■□□□ 1.22
TRAPPC12-220ENST00000482645 NEK8Q86SG6 692 aa22.66■■□□□ 1.22
TRAPPC12-220ENST00000482645 CYP2W1Q8TAV3 490 aa22.66■■□□□ 1.22
TRAPPC12-220ENST00000482645 ZNF333Q96JL9 665 aa22.66■■□□□ 1.22
TRAPPC12-220ENST00000482645 WDR11Q9BZH6 1224 aa22.66■■□□□ 1.22
TRAPPC12-220ENST00000482645 UNC93B1Q9H1C4 597 aa22.66■■□□□ 1.22
TRAPPC12-220ENST00000482645 KIAA1217Q5T5P2 1943 aa22.65■■□□□ 1.22
TRAPPC12-220ENST00000482645 STAM2O75886 525 aa22.65■■□□□ 1.22
TRAPPC12-220ENST00000482645 RGS20O76081 388 aa22.65■■□□□ 1.22
TRAPPC12-220ENST00000482645 ITGB5P18084 799 aa22.65■■□□□ 1.22
TRAPPC12-220ENST00000482645 U2AF2P26368 475 aaKnown RBP eCLIP22.65■■□□□ 1.221e-6■■■■■ 28.8
TRAPPC12-220ENST00000482645 GNPTABQ3T906 1256 aa22.65■■□□□ 1.22
TRAPPC12-220ENST00000482645 TAPT1Q6NXT6 567 aa22.65■■□□□ 1.22
TRAPPC12-220ENST00000482645 NLRX1Q86UT6 975 aa22.65■■□□□ 1.22
TRAPPC12-220ENST00000482645 CRYGNQ8WXF5 182 aa22.65■■□□□ 1.22
TRAPPC12-220ENST00000482645 LENG1Q96BZ8 264 aaPredicted RBP22.65■■□□□ 1.22
TRAPPC12-220ENST00000482645 NRBP1Q9UHY1 535 aa22.65■■□□□ 1.22
TRAPPC12-220ENST00000482645 MRVI1Q9Y6F6 885 aa22.65■■□□□ 1.22
TRAPPC12-220ENST00000482645 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.64■■□□□ 1.21
TRAPPC12-220ENST00000482645 FAM86B1E9PN63 330 aa22.64■■□□□ 1.21
TRAPPC12-220ENST00000482645 TDP2O95551 362 aa22.64■■□□□ 1.21
TRAPPC12-220ENST00000482645 CYP3A4P08684 503 aa22.64■■□□□ 1.21
TRAPPC12-220ENST00000482645 FAM86B2P0C5J1 330 aa22.64■■□□□ 1.21
TRAPPC12-220ENST00000482645 CCL5P13501 91 aa22.64■■□□□ 1.21
TRAPPC12-220ENST00000482645 MTMR1Q13613 665 aa22.64■■□□□ 1.21
TRAPPC12-220ENST00000482645 FOXD4L6Q3SYB3 417 aaPredicted RBP22.64■■□□□ 1.21
TRAPPC12-220ENST00000482645 CEP55Q53EZ4 464 aa22.64■■□□□ 1.21
TRAPPC12-220ENST00000482645 FOXD4L3Q6VB84 417 aaPredicted RBP22.64■■□□□ 1.21
TRAPPC12-220ENST00000482645 SCFD2Q8WU76 684 aa22.64■■□□□ 1.21
TRAPPC12-220ENST00000482645 ARMC5Q96C12 935 aa22.64■■□□□ 1.21
TRAPPC12-220ENST00000482645 INPP4AQ96PE3 977 aaPredicted RBP22.64■■□□□ 1.21
TRAPPC12-220ENST00000482645 UIMC1Q96RL1 719 aa22.64■■□□□ 1.21
TRAPPC12-220ENST00000482645 MXRA8Q9BRK3 442 aa22.64■■□□□ 1.21
TRAPPC12-220ENST00000482645 RNF208Q9H0X6 261 aa22.64■■□□□ 1.21
TRAPPC12-220ENST00000482645 PKD2L1Q9P0L9 805 aa22.64■■□□□ 1.21
TRAPPC12-220ENST00000482645 FAM184BQ9ULE4 1060 aa22.64■■□□□ 1.21
TRAPPC12-220ENST00000482645 CCNT1O60563 726 aaKnown RBP22.63■■□□□ 1.21
TRAPPC12-220ENST00000482645 AKR1A1P14550 325 aa22.63■■□□□ 1.21
TRAPPC12-220ENST00000482645 USP11P51784 963 aa22.63■■□□□ 1.21
TRAPPC12-220ENST00000482645 PRR16Q569H4 304 aa22.63■■□□□ 1.21
TRAPPC12-220ENST00000482645 TMEM63BQ5T3F8 832 aa22.63■■□□□ 1.21
TRAPPC12-220ENST00000482645 TNPO1Q92973 898 aaKnown RBP22.63■■□□□ 1.21
TRAPPC12-220ENST00000482645 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.63■■□□□ 1.21
TRAPPC12-220ENST00000482645 UBIAD1Q9Y5Z9 338 aa22.63■■□□□ 1.21
TRAPPC12-220ENST00000482645 SEPT4O43236 478 aa22.62■■□□□ 1.21
TRAPPC12-220ENST00000482645 EDIL3O43854 480 aa22.62■■□□□ 1.21
TRAPPC12-220ENST00000482645 SORBS3O60504 671 aa22.62■■□□□ 1.21
TRAPPC12-220ENST00000482645 TXNP10599 105 aaKnown RBP22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms