RNA–Protein interactions for RNA: ENST00000482395.1

TRA2A-206, Transcript of transformer 2 alpha homolog, humanhuman

TSL 2

Gene TRA2A, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-206ENST00000482395 CUL5Q93034 780 aa23.93■■□□□ 1.42
TRA2A-206ENST00000482395 EMID1Q96A84 441 aaPredicted RBP23.93■■□□□ 1.42
TRA2A-206ENST00000482395 DDX41Q9UJV9 622 aaKnown RBP23.93■■□□□ 1.42
TRA2A-206ENST00000482395 FRMPD4Q14CM0 1322 aa23.92■■□□□ 1.42
TRA2A-206ENST00000482395 SUPT20HL2P0C7V6 817 aa23.92■■□□□ 1.42
TRA2A-206ENST00000482395 MYCLP12524 364 aaPredicted RBP23.92■■□□□ 1.42
TRA2A-206ENST00000482395 RCAN1P53805 252 aa23.92■■□□□ 1.42
TRA2A-206ENST00000482395 PSMC6P62333 389 aa23.92■■□□□ 1.42
TRA2A-206ENST00000482395 PTPN11Q06124 597 aaPredicted RBP23.92■■□□□ 1.42
TRA2A-206ENST00000482395 PPIGQ13427 754 aaKnown RBP eCLIP23.92■■□□□ 1.423e-10■□□□□ 10.7
TRA2A-206ENST00000482395 SHHQ15465 462 aa23.92■■□□□ 1.42
TRA2A-206ENST00000482395 LY6KQ17RY6 165 aa23.92■■□□□ 1.42
TRA2A-206ENST00000482395 APOA5Q6Q788 366 aa23.92■■□□□ 1.42
TRA2A-206ENST00000482395 PIBF1Q8WXW3 757 aa23.92■■□□□ 1.42
TRA2A-206ENST00000482395 PIK3CDO00329 1044 aa23.91■■□□□ 1.42
TRA2A-206ENST00000482395 TGFB3P10600 412 aa23.91■■□□□ 1.42
TRA2A-206ENST00000482395 RXRAP19793 462 aa23.91■■□□□ 1.42
TRA2A-206ENST00000482395 HSPA4P34932 840 aa23.91■■□□□ 1.42
TRA2A-206ENST00000482395 ARHGAP1Q07960 439 aa23.91■■□□□ 1.42
TRA2A-206ENST00000482395 LAMC2Q13753 1193 aa23.91■■□□□ 1.42
TRA2A-206ENST00000482395 ADCK5Q3MIX3 580 aa23.91■■□□□ 1.42
TRA2A-206ENST00000482395 NFRKBQ6P4R8 1299 aa23.91■■□□□ 1.42
TRA2A-206ENST00000482395 FCHSD1Q86WN1 690 aa23.91■■□□□ 1.42
TRA2A-206ENST00000482395 ALDH8A1Q9H2A2 487 aaPredicted RBP23.91■■□□□ 1.42
TRA2A-206ENST00000482395 ZBTB43O43298 467 aa23.9■■□□□ 1.42
TRA2A-206ENST00000482395 B4GALT4O60513 344 aa23.9■■□□□ 1.42
TRA2A-206ENST00000482395 MMP3P08254 477 aa23.9■■□□□ 1.42
TRA2A-206ENST00000482395 CASTP20810 708 aaKnown RBP23.9■■□□□ 1.42
TRA2A-206ENST00000482395 GNPTABQ3T906 1256 aa23.9■■□□□ 1.42
TRA2A-206ENST00000482395 C9orf50Q5SZB4 431 aa23.9■■□□□ 1.42
TRA2A-206ENST00000482395 SMARCC2Q8TAQ2 1214 aa23.9■■□□□ 1.42
TRA2A-206ENST00000482395 HIPK3Q9H422 1215 aa23.9■■□□□ 1.42
TRA2A-206ENST00000482395 PPP4R2Q9NY27 417 aa23.9■■□□□ 1.42
TRA2A-206ENST00000482395 DHX37Q8IY37 1157 aaKnown RBP23.89■■□□□ 1.41
TRA2A-206ENST00000482395 AFG1LQ8WV93 481 aa23.89■■□□□ 1.41
TRA2A-206ENST00000482395 FGD1P98174 961 aa23.88■■□□□ 1.41
TRA2A-206ENST00000482395 DGKDQ16760 1214 aa23.88■■□□□ 1.41
TRA2A-206ENST00000482395 RTN1Q16799 776 aa23.88■■□□□ 1.41
TRA2A-206ENST00000482395 NBPF20Q3BBV1 942 aa23.88■■□□□ 1.41
TRA2A-206ENST00000482395 FAM109BQ6ICB4 259 aaPredicted RBP23.88■■□□□ 1.41
TRA2A-206ENST00000482395 XRRA1Q6P2D8 792 aa23.88■■□□□ 1.41
TRA2A-206ENST00000482395 TEX2Q8IWB9 1127 aa23.88■■□□□ 1.41
TRA2A-206ENST00000482395 IL31RAQ8NI17 732 aa23.88■■□□□ 1.41
TRA2A-206ENST00000482395 PPTC7Q8NI37 304 aa23.88■■□□□ 1.41
TRA2A-206ENST00000482395 RNPC3Q96LT9 517 aaKnown RBP23.88■■□□□ 1.41
TRA2A-206ENST00000482395 PPP1R12CQ9BZL4 782 aa23.88■■□□□ 1.41
TRA2A-206ENST00000482395 hCG_1984214I3L0E3 225 aa23.87■■□□□ 1.41
TRA2A-206ENST00000482395 RGS20O76081 388 aa23.87■■□□□ 1.41
TRA2A-206ENST00000482395 SMAD3P84022 425 aaKnown RBP23.87■■□□□ 1.41
TRA2A-206ENST00000482395 FAM47CQ5HY64 1035 aa23.87■■□□□ 1.41
TRA2A-206ENST00000482395 PSRC1Q6PGN9 363 aaPredicted RBP23.87■■□□□ 1.41
TRA2A-206ENST00000482395 RAB11FIP4Q86YS3 637 aa23.87■■□□□ 1.41
TRA2A-206ENST00000482395 CMTR1Q8N1G2 835 aaKnown RBP23.87■■□□□ 1.41
TRA2A-206ENST00000482395 ZNF713Q8N859 430 aaPredicted RBP23.87■■□□□ 1.41
TRA2A-206ENST00000482395 NOC4LQ9BVI4 516 aaKnown RBP23.87■■□□□ 1.41
TRA2A-206ENST00000482395 KATNAL1Q9BW62 490 aa23.87■■□□□ 1.41
TRA2A-206ENST00000482395 TRPV6Q9H1D0 765 aa23.87■■□□□ 1.41
TRA2A-206ENST00000482395 CNTNAP5Q8WYK1 1306 aa23.86■■□□□ 1.41
TRA2A-206ENST00000482395 TANC1Q9C0D5 1861 aa23.86■■□□□ 1.41
TRA2A-206ENST00000482395 MEIS2O14770 477 aa23.86■■□□□ 1.41
TRA2A-206ENST00000482395 PSMA5P28066 241 aa23.86■■□□□ 1.41
TRA2A-206ENST00000482395 EPHB4P54760 987 aa23.86■■□□□ 1.41
TRA2A-206ENST00000482395 BLOC1S2Q6QNY1 142 aa23.86■■□□□ 1.41
TRA2A-206ENST00000482395 FBXL16Q8N461 479 aa23.86■■□□□ 1.41
TRA2A-206ENST00000482395 TCEANC2Q96MN5 208 aa23.86■■□□□ 1.41
TRA2A-206ENST00000482395 INPP4AQ96PE3 977 aaPredicted RBP23.86■■□□□ 1.41
TRA2A-206ENST00000482395 PSTPIP2Q9H939 334 aa23.86■■□□□ 1.41
TRA2A-206ENST00000482395 SNX14Q9Y5W7 946 aa23.86■■□□□ 1.41
TRA2A-206ENST00000482395 KLF18A0A0U1RQI7 1052 aa23.85■■□□□ 1.41
TRA2A-206ENST00000482395 GOLGA8AA7E2F4 631 aa23.85■■□□□ 1.41
TRA2A-206ENST00000482395 GOLGA8BA8MQT2 603 aa23.85■■□□□ 1.41
TRA2A-206ENST00000482395 CENPBP07199 599 aaPredicted RBP23.85■■□□□ 1.41
TRA2A-206ENST00000482395 CSF2RAP15509 400 aa23.85■■□□□ 1.41
TRA2A-206ENST00000482395 ICAM3P32942 547 aa23.85■■□□□ 1.41
TRA2A-206ENST00000482395 CELF3Q5SZQ8 465 aaKnown RBP23.85■■□□□ 1.41
TRA2A-206ENST00000482395 MYSM1Q5VVJ2 828 aa23.85■■□□□ 1.41
TRA2A-206ENST00000482395 PCNX4Q63HM2 1172 aa23.85■■□□□ 1.41
TRA2A-206ENST00000482395 USP17L6PQ6QN14 398 aa23.85■■□□□ 1.41
TRA2A-206ENST00000482395 SESTD1Q86VW0 696 aa23.85■■□□□ 1.41
TRA2A-206ENST00000482395 CCDC82Q8N4S0 544 aa23.85■■□□□ 1.41
TRA2A-206ENST00000482395 JAKMIP1Q96N16 626 aaKnown RBP23.85■■□□□ 1.41
TRA2A-206ENST00000482395 BRPF3Q9ULD4 1205 aa23.85■■□□□ 1.41
TRA2A-206ENST00000482395 CCDC196A0A1B0GTZ2 297 aa23.84■■□□□ 1.41
TRA2A-206ENST00000482395 HOXD8P13378 290 aaPredicted RBP23.84■■□□□ 1.41
TRA2A-206ENST00000482395 UBA1P22314 1058 aaKnown RBP23.84■■□□□ 1.41
TRA2A-206ENST00000482395 CYP2C18P33260 490 aa23.84■■□□□ 1.41
TRA2A-206ENST00000482395 PPP1R18Q6NYC8 613 aa23.84■■□□□ 1.41
TRA2A-206ENST00000482395 DEFB123Q8N688 67 aa23.84■■□□□ 1.41
TRA2A-206ENST00000482395 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.84■■□□□ 1.41
TRA2A-206ENST00000482395 IL23AQ9NPF7 189 aa23.84■■□□□ 1.41
TRA2A-206ENST00000482395 DOCK5Q9H7D0 1870 aa23.83■■□□□ 1.41
TRA2A-206ENST00000482395 FIBPO43427 364 aa23.83■■□□□ 1.41
TRA2A-206ENST00000482395 PPFIA4O75335 1185 aa23.83■■□□□ 1.41
TRA2A-206ENST00000482395 GGPS1O95749 300 aa23.83■■□□□ 1.41
TRA2A-206ENST00000482395 MRPS9P82933 396 aaKnown RBP23.83■■□□□ 1.41
TRA2A-206ENST00000482395 NEDD9Q14511 834 aa23.83■■□□□ 1.41
TRA2A-206ENST00000482395 HEATR3Q7Z4Q2 680 aa23.83■■□□□ 1.41
TRA2A-206ENST00000482395 RPUSD2Q8IZ73 545 aaKnown RBP23.83■■□□□ 1.41
TRA2A-206ENST00000482395 MTIF3Q9H2K0 278 aaKnown RBP23.83■■□□□ 1.41
TRA2A-206ENST00000482395 EHMT1Q9H9B1 1298 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms