RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 HSPA1BP0DMV9 641 aaKnown RBP13.19□□□□□ -0.3
HPS4-212ENST00000481910 EIF2AK2P19525 551 aaKnown RBP13.19□□□□□ -0.3
HPS4-212ENST00000481910 CYP2B6P20813 491 aa13.19□□□□□ -0.3
HPS4-212ENST00000481910 NUCB2P80303 420 aa13.19□□□□□ -0.3
HPS4-212ENST00000481910 ZNF792Q3KQV3 632 aa13.19□□□□□ -0.3
HPS4-212ENST00000481910 EARS2Q5JPH6 523 aaKnown RBP13.19□□□□□ -0.3
HPS4-212ENST00000481910 TBCKQ8TEA7 893 aa13.19□□□□□ -0.3
HPS4-212ENST00000481910 PXMP2Q9NR77 195 aa13.19□□□□□ -0.3
HPS4-212ENST00000481910 PLXNA1Q9UIW2 1896 aa13.19□□□□□ -0.3
HPS4-212ENST00000481910 RGS2P41220 211 aa13.19□□□□□ -0.3
HPS4-212ENST00000481910 FLT3LGP49771 235 aa13.19□□□□□ -0.3
HPS4-212ENST00000481910 INF2Q27J81 1249 aa13.19□□□□□ -0.3
HPS4-212ENST00000481910 NPLOC4Q8TAT6 608 aa13.19□□□□□ -0.3
HPS4-212ENST00000481910 USP6NLQ92738 828 aa13.19□□□□□ -0.3
HPS4-212ENST00000481910 ZSCAN16Q9H4T2 348 aaPredicted RBP13.19□□□□□ -0.3
HPS4-212ENST00000481910 GABRQQ9UN88 632 aa13.19□□□□□ -0.3
HPS4-212ENST00000481910 DIS3Q9Y2L1 958 aaKnown RBP13.19□□□□□ -0.3
HPS4-212ENST00000481910 LCTP09848 1927 aa13.19□□□□□ -0.3
HPS4-212ENST00000481910 FAM205CA6NFA0 338 aa13.18□□□□□ -0.3
HPS4-212ENST00000481910 B4DLN1 442 aa13.18□□□□□ -0.3
HPS4-212ENST00000481910 BRD1O95696 1058 aa13.18□□□□□ -0.3
HPS4-212ENST00000481910 F13A1P00488 732 aa13.18□□□□□ -0.3
HPS4-212ENST00000481910 ALDH5A1P51649 535 aaPredicted RBP13.18□□□□□ -0.3
HPS4-212ENST00000481910 PRKCZQ05513 592 aa13.18□□□□□ -0.3
HPS4-212ENST00000481910 PGM5Q15124 567 aa13.18□□□□□ -0.3
HPS4-212ENST00000481910 BRAPQ7Z569 592 aa13.18□□□□□ -0.3
HPS4-212ENST00000481910 MPHOSPH6Q99547 160 aaKnown RBP13.18□□□□□ -0.3
HPS4-212ENST00000481910 PDCD2LQ9BRP1 358 aa13.18□□□□□ -0.3
HPS4-212ENST00000481910 SRRDQ9UH36 339 aa13.18□□□□□ -0.3
HPS4-212ENST00000481910 CIZ1Q9ULV3 898 aaPredicted RBP13.18□□□□□ -0.3
HPS4-212ENST00000481910 ZDHHC9Q9Y397 364 aa13.18□□□□□ -0.3
HPS4-212ENST00000481910 ASTN1O14525 1302 aa13.18□□□□□ -0.3
HPS4-212ENST00000481910 MYH7BA7E2Y1 1941 aa13.18□□□□□ -0.3
HPS4-212ENST00000481910 CASP8AP2Q9UKL3 1982 aa13.18□□□□□ -0.3
HPS4-212ENST00000481910 NR3C2P08235 984 aa13.17□□□□□ -0.3
HPS4-212ENST00000481910 HOXC6P09630 235 aa13.17□□□□□ -0.3
HPS4-212ENST00000481910 HSPA8P11142 646 aaKnown RBP13.17□□□□□ -0.3
HPS4-212ENST00000481910 MYCLP12524 364 aaPredicted RBP13.17□□□□□ -0.3
HPS4-212ENST00000481910 SREBF1P36956 1147 aa13.17□□□□□ -0.3
HPS4-212ENST00000481910 ARHGAP4P98171 946 aa13.17□□□□□ -0.3
HPS4-212ENST00000481910 RESTQ13127 1097 aa13.17□□□□□ -0.3
HPS4-212ENST00000481910 RPTORQ8N122 1335 aa13.17□□□□□ -0.3
HPS4-212ENST00000481910 MAML3Q96JK9 1138 aa13.17□□□□□ -0.3
HPS4-212ENST00000481910 FGD4Q96M96 766 aa13.17□□□□□ -0.3
HPS4-212ENST00000481910 IWS1Q96ST2 819 aa13.17□□□□□ -0.3
HPS4-212ENST00000481910 APBA2Q99767 749 aa13.17□□□□□ -0.3
HPS4-212ENST00000481910 CHMP5Q9NZZ3 219 aa13.17□□□□□ -0.3
HPS4-212ENST00000481910 ZNF236Q9UL36 1845 aa13.17□□□□□ -0.3
HPS4-212ENST00000481910 ASB14A6NK59 587 aa13.17□□□□□ -0.3
HPS4-212ENST00000481910 ATP2B1P20020 1258 aa13.17□□□□□ -0.3
HPS4-212ENST00000481910 CTCFP49711 727 aaPredicted RBP13.17□□□□□ -0.3
HPS4-212ENST00000481910 USP11P51784 963 aa13.17□□□□□ -0.3
HPS4-212ENST00000481910 LBX1P52954 281 aa13.17□□□□□ -0.3
HPS4-212ENST00000481910 DMTNQ08495 405 aa13.17□□□□□ -0.3
HPS4-212ENST00000481910 ZNF467Q7Z7K2 595 aaPredicted RBP13.17□□□□□ -0.3
HPS4-212ENST00000481910 NEK8Q86SG6 692 aa13.17□□□□□ -0.3
HPS4-212ENST00000481910 IL31RAQ8NI17 732 aa13.17□□□□□ -0.3
HPS4-212ENST00000481910 NOL7Q9UMY1 257 aaKnown RBP13.17□□□□□ -0.3
HPS4-212ENST00000481910 TRIM17Q9Y577 477 aa13.17□□□□□ -0.3
HPS4-212ENST00000481910 DDX49Q9Y6V7 483 aaKnown RBP13.17□□□□□ -0.3
HPS4-212ENST00000481910 FRMPD4Q14CM0 1322 aa13.16□□□□□ -0.3
HPS4-212ENST00000481910 XRCC5P13010 732 aaKnown RBP13.16□□□□□ -0.3
HPS4-212ENST00000481910 CCND2P30279 289 aa13.16□□□□□ -0.3
HPS4-212ENST00000481910 ZNF76P36508 570 aa13.16□□□□□ -0.3
HPS4-212ENST00000481910 PDE4DQ08499 809 aa13.16□□□□□ -0.3
HPS4-212ENST00000481910 LETM2Q2VYF4 491 aa13.16□□□□□ -0.3
HPS4-212ENST00000481910 PCNX4Q63HM2 1172 aa13.16□□□□□ -0.3
HPS4-212ENST00000481910 FAM173BQ6P4H8 233 aa13.16□□□□□ -0.3
HPS4-212ENST00000481910 VSIG10LQ86VR7 867 aa13.16□□□□□ -0.3
HPS4-212ENST00000481910 CRYGNQ8WXF5 182 aa13.16□□□□□ -0.3
HPS4-212ENST00000481910 LOC102724159A0A0B4J2E5 919 aa13.15□□□□□ -0.3
HPS4-212ENST00000481910 TTC36A6NLP5 189 aa13.15□□□□□ -0.3
HPS4-212ENST00000481910 CYP3A4P08684 503 aa13.15□□□□□ -0.3
HPS4-212ENST00000481910 PWP2Q15269 919 aaKnown RBP13.15□□□□□ -0.3
HPS4-212ENST00000481910 STXBP2Q15833 593 aa13.15□□□□□ -0.3
HPS4-212ENST00000481910 CCL14Q16627 93 aa13.15□□□□□ -0.3
HPS4-212ENST00000481910 FOXD4L6Q3SYB3 417 aaPredicted RBP13.15□□□□□ -0.3
HPS4-212ENST00000481910 RILPL1Q5EBL4 403 aa13.15□□□□□ -0.3
HPS4-212ENST00000481910 MYSM1Q5VVJ2 828 aa13.15□□□□□ -0.3
HPS4-212ENST00000481910 FOXD4L3Q6VB84 417 aaPredicted RBP13.15□□□□□ -0.3
HPS4-212ENST00000481910 OTOP1Q7RTM1 612 aa13.15□□□□□ -0.3
HPS4-212ENST00000481910 RAET1EQ8TD07 263 aa13.15□□□□□ -0.3
HPS4-212ENST00000481910 TINF2Q9BSI4 451 aa13.15□□□□□ -0.3
HPS4-212ENST00000481910 GEMIN8Q9NWZ8 242 aaKnown RBP13.15□□□□□ -0.3
HPS4-212ENST00000481910 RTEL1Q9NZ71 1219 aa13.15□□□□□ -0.3
HPS4-212ENST00000481910 MCM3APO60318 1980 aa13.15□□□□□ -0.3
HPS4-212ENST00000481910 CCNT1O60563 726 aaKnown RBP13.15□□□□□ -0.3
HPS4-212ENST00000481910 TRAPPC10P48553 1259 aa13.15□□□□□ -0.3
HPS4-212ENST00000481910 MRPS9P82933 396 aaKnown RBP13.15□□□□□ -0.3
HPS4-212ENST00000481910 XRRA1Q6P2D8 792 aa13.15□□□□□ -0.3
HPS4-212ENST00000481910 MAMDC4Q6UXC1 1216 aa13.15□□□□□ -0.3
HPS4-212ENST00000481910 ARMCX2Q7L311 632 aa13.15□□□□□ -0.3
HPS4-212ENST00000481910 EEPD1Q7L9B9 569 aa13.15□□□□□ -0.3
HPS4-212ENST00000481910 MSL3Q8N5Y2 521 aaKnown RBP13.15□□□□□ -0.3
HPS4-212ENST00000481910 FLRT1Q9NZU1 646 aa13.15□□□□□ -0.3
HPS4-212ENST00000481910 ATP6V1DQ9Y5K8 247 aa13.15□□□□□ -0.3
HPS4-212ENST00000481910 EDIL3O43854 480 aa13.14□□□□□ -0.31
HPS4-212ENST00000481910 EIF3JO75822 258 aaKnown RBP13.14□□□□□ -0.31
HPS4-212ENST00000481910 EDNRBP24530 442 aa13.14□□□□□ -0.31
HPS4-212ENST00000481910 TOB1P50616 345 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms