RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 ZNF267Q14586 743 aaPredicted RBP4.09□□□□□ -1.75
SMC6-208ENST00000481708 HEATR6Q6AI08 1181 aaKnown RBP4.09□□□□□ -1.75
SMC6-208ENST00000481708 GGT6Q6P531 493 aa4.09□□□□□ -1.75
SMC6-208ENST00000481708 LDHAL6AQ6ZMR3 332 aa4.09□□□□□ -1.75
SMC6-208ENST00000481708 DTHD1Q6ZMT9 781 aa4.09□□□□□ -1.75
SMC6-208ENST00000481708 C1orf122Q6ZSJ8 110 aa4.09□□□□□ -1.75
SMC6-208ENST00000481708 OTOP3Q7RTS5 596 aa4.09□□□□□ -1.75
SMC6-208ENST00000481708 CPA6Q8N4T0 437 aa4.09□□□□□ -1.75
SMC6-208ENST00000481708 PDILTQ8N807 584 aa4.09□□□□□ -1.75
SMC6-208ENST00000481708 C19orf47Q8N9M1 422 aaKnown RBP4.09□□□□□ -1.75
SMC6-208ENST00000481708 POF1BQ8WVV4 589 aa4.09□□□□□ -1.75
SMC6-208ENST00000481708 LIN7BQ9HAP6 207 aa4.09□□□□□ -1.75
SMC6-208ENST00000481708 LGR6Q9HBX8 967 aa4.09□□□□□ -1.75
SMC6-208ENST00000481708 TCF7L1Q9HCS4 588 aa4.09□□□□□ -1.75
SMC6-208ENST00000481708 A0A1W2PP64 1363 aa4.09□□□□□ -1.75
SMC6-208ENST00000481708 MEIS3P2A8K0S8 358 aa4.09□□□□□ -1.76
SMC6-208ENST00000481708 MMP20O60882 483 aa4.09□□□□□ -1.76
SMC6-208ENST00000481708 ATE1O95260 518 aa4.09□□□□□ -1.76
SMC6-208ENST00000481708 ITPKAP23677 461 aa4.09□□□□□ -1.76
SMC6-208ENST00000481708 TNP2Q05952 138 aa4.09□□□□□ -1.76
SMC6-208ENST00000481708 STK3Q13188 491 aa4.09□□□□□ -1.76
SMC6-208ENST00000481708 SAFBQ15424 915 aaKnown RBP eCLIP4.09□□□□□ -1.76
SMC6-208ENST00000481708 SF1Q15637 639 aaKnown RBP4.09□□□□□ -1.76
SMC6-208ENST00000481708 LONRF2Q1L5Z9 754 aa4.09□□□□□ -1.76
SMC6-208ENST00000481708 RIPOR1Q6ZS17 1223 aa4.09□□□□□ -1.76
SMC6-208ENST00000481708 DDX46Q7L014 1031 aaKnown RBP4.09□□□□□ -1.76
SMC6-208ENST00000481708 RAB44Q7Z6P3 723 aaPredicted RBP4.09□□□□□ -1.76
SMC6-208ENST00000481708 PPFIBP1Q86W92 1011 aa4.09□□□□□ -1.76
SMC6-208ENST00000481708 IL17REQ8NFR9 667 aa4.09□□□□□ -1.76
SMC6-208ENST00000481708 LRGUKQ96M69 825 aa4.09□□□□□ -1.76
SMC6-208ENST00000481708 ALDH8A1Q9H2A2 487 aaPredicted RBP4.09□□□□□ -1.76
SMC6-208ENST00000481708 APEX2Q9UBZ4 518 aa4.09□□□□□ -1.76
SMC6-208ENST00000481708 DIS3Q9Y2L1 958 aaKnown RBP4.09□□□□□ -1.76
SMC6-208ENST00000481708 TTC21AQ8NDW8 1320 aa4.08□□□□□ -1.76
SMC6-208ENST00000481708 EYA2O00167 538 aa4.08□□□□□ -1.76
SMC6-208ENST00000481708 SNX2O60749 519 aa4.08□□□□□ -1.76
SMC6-208ENST00000481708 MAPTP10636 758 aaKnown RBP4.08□□□□□ -1.76
SMC6-208ENST00000481708 POLR2BP30876 1174 aaKnown RBP4.08□□□□□ -1.76
SMC6-208ENST00000481708 FNDC3BQ53EP0 1204 aaKnown RBP4.08□□□□□ -1.76
SMC6-208ENST00000481708 RNF219Q5W0B1 726 aaPredicted RBP4.08□□□□□ -1.76
SMC6-208ENST00000481708 VHLLQ6RSH7 139 aa4.08□□□□□ -1.76
SMC6-208ENST00000481708 UNC5AQ6ZN44 842 aa4.08□□□□□ -1.76
SMC6-208ENST00000481708 EEPD1Q7L9B9 569 aa4.08□□□□□ -1.76
SMC6-208ENST00000481708 BRAPQ7Z569 592 aa4.08□□□□□ -1.76
SMC6-208ENST00000481708 GSTCDQ8NEC7 633 aa4.08□□□□□ -1.76
SMC6-208ENST00000481708 DMTF1Q9Y222 760 aa4.08□□□□□ -1.76
SMC6-208ENST00000481708 DGKBQ9Y6T7 804 aa4.08□□□□□ -1.76
SMC6-208ENST00000481708 A0A087WZG4 1122 aa4.08□□□□□ -1.76
SMC6-208ENST00000481708 ATXN7O15265 892 aaPredicted RBP4.08□□□□□ -1.76
SMC6-208ENST00000481708 FBXO21O94952 628 aa4.08□□□□□ -1.76
SMC6-208ENST00000481708 IL6STP40189 918 aaPredicted RBP4.08□□□□□ -1.76
SMC6-208ENST00000481708 CHAF1AQ13111 956 aaPredicted RBP4.08□□□□□ -1.76
SMC6-208ENST00000481708 DHCR24Q15392 516 aa4.08□□□□□ -1.76
SMC6-208ENST00000481708 CWF19L2Q2TBE0 894 aaKnown RBP4.08□□□□□ -1.76
SMC6-208ENST00000481708 TRIM61Q5EBN2 209 aa4.08□□□□□ -1.76
SMC6-208ENST00000481708 CREBRFQ8IUR6 639 aa4.08□□□□□ -1.76
SMC6-208ENST00000481708 CPXCR1Q8N123 301 aa4.08□□□□□ -1.76
SMC6-208ENST00000481708 SECISBP2LQ93073 1101 aaKnown RBP4.08□□□□□ -1.76
SMC6-208ENST00000481708 MPP4Q96JB8 637 aa4.08□□□□□ -1.76
SMC6-208ENST00000481708 SLC9A7Q96T83 725 aa4.08□□□□□ -1.76
SMC6-208ENST00000481708 SLC30A3Q99726 388 aa4.08□□□□□ -1.76
SMC6-208ENST00000481708 HDAC9Q9UKV0 1011 aa4.08□□□□□ -1.76
SMC6-208ENST00000481708 KCNH4Q9UQ05 1017 aa4.08□□□□□ -1.76
SMC6-208ENST00000481708 ANO9A1A5B4 782 aa4.08□□□□□ -1.76
SMC6-208ENST00000481708 HMGB1P1B2RPK0 211 aaPredicted RBP4.08□□□□□ -1.76
SMC6-208ENST00000481708 MT-CO1P00395 513 aa4.08□□□□□ -1.76
SMC6-208ENST00000481708 CES1P23141 567 aa4.08□□□□□ -1.76
SMC6-208ENST00000481708 GRB10Q13322 594 aa4.08□□□□□ -1.76
SMC6-208ENST00000481708 EFHC2Q5JST6 749 aa4.08□□□□□ -1.76
SMC6-208ENST00000481708 SRLQ86TD4 932 aa4.08□□□□□ -1.76
SMC6-208ENST00000481708 SLC41A1Q8IVJ1 513 aa4.08□□□□□ -1.76
SMC6-208ENST00000481708 PAF1Q8N7H5 531 aa4.08□□□□□ -1.76
SMC6-208ENST00000481708 ENAHQ8N8S7 591 aaPredicted RBP4.08□□□□□ -1.76
SMC6-208ENST00000481708 TEX19Q8NA77 164 aa4.08□□□□□ -1.76
SMC6-208ENST00000481708 OSBP2Q969R2 916 aa4.08□□□□□ -1.76
SMC6-208ENST00000481708 ABHD17AQ96GS6 310 aa4.08□□□□□ -1.76
SMC6-208ENST00000481708 TISP43B9A030 160 aa4.07□□□□□ -1.76
SMC6-208ENST00000481708 B9A039 149 aa4.07□□□□□ -1.76
SMC6-208ENST00000481708 KHNYNO15037 678 aaKnown RBP4.07□□□□□ -1.76
SMC6-208ENST00000481708 RBP3P10745 1247 aa4.07□□□□□ -1.76
SMC6-208ENST00000481708 GLULP15104 373 aa4.07□□□□□ -1.76
SMC6-208ENST00000481708 ADCYAP1R1P41586 468 aa4.07□□□□□ -1.76
SMC6-208ENST00000481708 RPS26P62854 115 aaKnown RBP4.07□□□□□ -1.76
SMC6-208ENST00000481708 ALFQ53S48 1182 aa4.07□□□□□ -1.76
SMC6-208ENST00000481708 NCAPG2Q86XI2 1143 aa4.07□□□□□ -1.76
SMC6-208ENST00000481708 SPATS2Q86XZ4 545 aaKnown RBP4.07□□□□□ -1.76
SMC6-208ENST00000481708 CCDC155Q8N6L0 562 aa4.07□□□□□ -1.76
SMC6-208ENST00000481708 OR13H1Q8NG92 308 aa4.07□□□□□ -1.76
SMC6-208ENST00000481708 FUBP3Q96I24 572 aaKnown RBP eCLIP4.07□□□□□ -1.76
SMC6-208ENST00000481708 TAAR9Q96RI9 348 aa4.07□□□□□ -1.76
SMC6-208ENST00000481708 CDC5LQ99459 802 aaKnown RBP4.07□□□□□ -1.76
SMC6-208ENST00000481708 NUCKS1Q9H1E3 243 aaKnown RBP4.07□□□□□ -1.76
SMC6-208ENST00000481708 ZNF576Q9H609 170 aa4.07□□□□□ -1.76
SMC6-208ENST00000481708 INTS7Q9NVH2 962 aaKnown RBP4.07□□□□□ -1.76
SMC6-208ENST00000481708 PCDHGC4Q9Y5F7 938 aa4.07□□□□□ -1.76
SMC6-208ENST00000481708 CD33P20138 364 aa4.07□□□□□ -1.76
SMC6-208ENST00000481708 TM4SF4P48230 202 aa4.07□□□□□ -1.76
SMC6-208ENST00000481708 RXRGP48443 463 aa4.07□□□□□ -1.76
SMC6-208ENST00000481708 PPP2R2AP63151 447 aa4.07□□□□□ -1.76
SMC6-208ENST00000481708 CCINQ13939 588 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms