RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 EIF3JO75822 258 aaKnown RBP21.54■■□□□ 1.04
CLK1-211ENST00000481641 SUPT20HL2P0C7V6 817 aa21.54■■□□□ 1.04
CLK1-211ENST00000481641 GHRHRQ02643 423 aa21.54■■□□□ 1.04
CLK1-211ENST00000481641 SART3Q15020 963 aaKnown RBP21.54■■□□□ 1.04
CLK1-211ENST00000481641 MAFAQ8NHW3 353 aaPredicted RBP21.54■■□□□ 1.04
CLK1-211ENST00000481641 IL31RAQ8NI17 732 aa21.54■■□□□ 1.04
CLK1-211ENST00000481641 PDCD2LQ9BRP1 358 aa21.54■■□□□ 1.04
CLK1-211ENST00000481641 MYL10Q9BUA6 226 aa21.54■■□□□ 1.04
CLK1-211ENST00000481641 LSG1Q9H089 658 aaKnown RBP21.54■■□□□ 1.04
CLK1-211ENST00000481641 ZNF576Q9H609 170 aa21.54■■□□□ 1.04
CLK1-211ENST00000481641 MYH7BA7E2Y1 1941 aa21.53■■□□□ 1.04
CLK1-211ENST00000481641 RGS20O76081 388 aa21.53■■□□□ 1.04
CLK1-211ENST00000481641 FOSL2P15408 326 aa21.53■■□□□ 1.04
CLK1-211ENST00000481641 NFRKBQ6P4R8 1299 aa21.53■■□□□ 1.04
CLK1-211ENST00000481641 DEFB128Q7Z7B8 93 aa21.53■■□□□ 1.04
CLK1-211ENST00000481641 CATIPQ7Z7H3 387 aa21.53■■□□□ 1.04
CLK1-211ENST00000481641 FCHSD1Q86WN1 690 aa21.53■■□□□ 1.04
CLK1-211ENST00000481641 KAT2BQ92831 832 aa21.53■■□□□ 1.04
CLK1-211ENST00000481641 MRVI1Q9Y6F6 885 aa21.53■■□□□ 1.04
CLK1-211ENST00000481641 MYO9BQ13459 2157 aa21.53■■□□□ 1.04
CLK1-211ENST00000481641 PNMA6FA0A0J9YX94 578 aa21.52■■□□□ 1.04
CLK1-211ENST00000481641 RPUSD2Q8IZ73 545 aaKnown RBP21.52■■□□□ 1.04
CLK1-211ENST00000481641 ESYT1Q9BSJ8 1104 aa21.52■■□□□ 1.04
CLK1-211ENST00000481641 LY9Q9HBG7 655 aa21.52■■□□□ 1.04
CLK1-211ENST00000481641 PRUNE2Q8WUY3 3088 aa21.52■■□□□ 1.03
CLK1-211ENST00000481641 GCOM1H8Y6P7 765 aaPredicted RBP21.51■■□□□ 1.03
CLK1-211ENST00000481641 RBAK-RBAKDNI3L0D1 243 aa21.51■■□□□ 1.03
CLK1-211ENST00000481641 PRC1O43663 620 aa21.51■■□□□ 1.03
CLK1-211ENST00000481641 POLR2MP0CAP2 368 aa21.51■■□□□ 1.03
CLK1-211ENST00000481641 PGM5Q15124 567 aa21.51■■□□□ 1.03
CLK1-211ENST00000481641 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.51■■□□□ 1.03
CLK1-211ENST00000481641 GBF1Q92538 1859 aa21.51■■□□□ 1.03
CLK1-211ENST00000481641 ZBBXA8MT70 800 aa21.5■■□□□ 1.03
CLK1-211ENST00000481641 SLC27A2O14975 620 aa21.5■■□□□ 1.03
CLK1-211ENST00000481641 RABGGTBP53611 331 aa21.5■■□□□ 1.03
CLK1-211ENST00000481641 PTPN11Q06124 597 aaPredicted RBP21.5■■□□□ 1.03
CLK1-211ENST00000481641 GDF6Q6KF10 455 aaPredicted RBP21.5■■□□□ 1.03
CLK1-211ENST00000481641 VSIG10LQ86VR7 867 aa21.5■■□□□ 1.03
CLK1-211ENST00000481641 ZNF654Q8IZM8 581 aa21.5■■□□□ 1.03
CLK1-211ENST00000481641 GPKOWQ92917 476 aaPredicted RBP eCLIP21.5■■□□□ 1.03
CLK1-211ENST00000481641 MTIF3Q9H2K0 278 aaKnown RBP21.5■■□□□ 1.03
CLK1-211ENST00000481641 NKX2-4Q9H2Z4 354 aa21.5■■□□□ 1.03
CLK1-211ENST00000481641 MAP3K20Q9NYL2 800 aaKnown RBP21.5■■□□□ 1.03
CLK1-211ENST00000481641 NOD1Q9Y239 953 aa21.5■■□□□ 1.03
CLK1-211ENST00000481641 YBX2Q9Y2T7 364 aaKnown RBP21.5■■□□□ 1.03
CLK1-211ENST00000481641 TRIP12Q14669 1992 aaPredicted RBP21.5■■□□□ 1.03
CLK1-211ENST00000481641 CHD9Q3L8U1 2897 aa21.49■■□□□ 1.03
CLK1-211ENST00000481641 ZNF286BP0CG31 522 aa21.49■■□□□ 1.03
CLK1-211ENST00000481641 CASTP20810 708 aaKnown RBP21.49■■□□□ 1.03
CLK1-211ENST00000481641 SP2Q02086 613 aa21.49■■□□□ 1.03
CLK1-211ENST00000481641 PTGISQ16647 500 aa21.49■■□□□ 1.03
CLK1-211ENST00000481641 DGKDQ16760 1214 aa21.49■■□□□ 1.03
CLK1-211ENST00000481641 CASC1Q6TDU7 716 aa21.49■■□□□ 1.03
CLK1-211ENST00000481641 RAB11FIP4Q86YS3 637 aa21.49■■□□□ 1.03
CLK1-211ENST00000481641 DHX37Q8IY37 1157 aaKnown RBP21.49■■□□□ 1.03
CLK1-211ENST00000481641 CTAGE1Q96RT6 745 aa21.49■■□□□ 1.03
CLK1-211ENST00000481641 ALG1Q9BT22 464 aa21.49■■□□□ 1.03
CLK1-211ENST00000481641 SLC4A7Q9Y6M7 1214 aa21.49■■□□□ 1.03
CLK1-211ENST00000481641 IQCF3P0C7M6 154 aa21.48■■□□□ 1.03
CLK1-211ENST00000481641 MYOGP15173 224 aa21.48■■□□□ 1.03
CLK1-211ENST00000481641 RXRAP19793 462 aa21.48■■□□□ 1.03
CLK1-211ENST00000481641 LAMC2Q13753 1193 aa21.48■■□□□ 1.03
CLK1-211ENST00000481641 CREB3L3Q68CJ9 461 aa21.48■■□□□ 1.03
CLK1-211ENST00000481641 SAMD3Q8N6K7 520 aa21.48■■□□□ 1.03
CLK1-211ENST00000481641 RETREG2Q8NC44 543 aa21.48■■□□□ 1.03
CLK1-211ENST00000481641 EMID1Q96A84 441 aaPredicted RBP21.48■■□□□ 1.03
CLK1-211ENST00000481641 LRRC2Q9BYS8 371 aa21.48■■□□□ 1.03
CLK1-211ENST00000481641 PRDM12Q9H4Q4 367 aa21.48■■□□□ 1.03
CLK1-211ENST00000481641 BCAS3Q9H6U6 928 aa21.48■■□□□ 1.03
CLK1-211ENST00000481641 MSRAQ9UJ68 235 aa21.48■■□□□ 1.03
CLK1-211ENST00000481641 TET1Q8NFU7 2136 aa21.47■■□□□ 1.03
CLK1-211ENST00000481641 CUL9Q8IWT3 2517 aa21.47■■□□□ 1.03
CLK1-211ENST00000481641 SH2B2O14492 632 aaPredicted RBP21.47■■□□□ 1.03
CLK1-211ENST00000481641 PLEKHA8P1O95397 391 aa21.47■■□□□ 1.03
CLK1-211ENST00000481641 CCND2P30279 289 aa21.47■■□□□ 1.03
CLK1-211ENST00000481641 PSEN2P49810 448 aa21.47■■□□□ 1.03
CLK1-211ENST00000481641 TRAF1Q13077 416 aa21.47■■□□□ 1.03
CLK1-211ENST00000481641 NECTIN1Q15223 517 aa21.47■■□□□ 1.03
CLK1-211ENST00000481641 RAB30Q15771 203 aa21.47■■□□□ 1.03
CLK1-211ENST00000481641 MYSM1Q5VVJ2 828 aa21.47■■□□□ 1.03
CLK1-211ENST00000481641 NFXL1Q6ZNB6 911 aa21.47■■□□□ 1.03
CLK1-211ENST00000481641 CMTR1Q8N1G2 835 aaKnown RBP21.47■■□□□ 1.03
CLK1-211ENST00000481641 PPTC7Q8NI37 304 aa21.47■■□□□ 1.03
CLK1-211ENST00000481641 CTCFLQ8NI51 663 aaPredicted RBP21.47■■□□□ 1.03
CLK1-211ENST00000481641 ANO2Q9NQ90 1003 aa21.47■■□□□ 1.03
CLK1-211ENST00000481641 HDAC6Q9UBN7 1215 aa21.47■■□□□ 1.03
CLK1-211ENST00000481641 DDAH1O94760 285 aa21.46■■□□□ 1.03
CLK1-211ENST00000481641 GGPS1O95749 300 aa21.46■■□□□ 1.03
CLK1-211ENST00000481641 UBA1P22314 1058 aaKnown RBP21.46■■□□□ 1.03
CLK1-211ENST00000481641 MCM5P33992 734 aa21.46■■□□□ 1.03
CLK1-211ENST00000481641 HSDL1Q3SXM5 330 aa21.46■■□□□ 1.03
CLK1-211ENST00000481641 CELF3Q5SZQ8 465 aaKnown RBP21.46■■□□□ 1.03
CLK1-211ENST00000481641 SRBD1Q8N5C6 995 aaKnown RBP21.46■■□□□ 1.03
CLK1-211ENST00000481641 USP38Q8NB14 1042 aa21.46■■□□□ 1.03
CLK1-211ENST00000481641 DHX38Q92620 1227 aaKnown RBP21.46■■□□□ 1.03
CLK1-211ENST00000481641 SPATA33Q96N06 139 aa21.46■■□□□ 1.03
CLK1-211ENST00000481641 CCDC69A6NI79 296 aa21.45■■□□□ 1.02
CLK1-211ENST00000481641 PITPNM1O00562 1244 aa21.45■■□□□ 1.02
CLK1-211ENST00000481641 PFKMP08237 780 aa21.45■■□□□ 1.02
CLK1-211ENST00000481641 MRPS9P82933 396 aaKnown RBP21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms