RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 PPARGC1AQ9UBK2 798 aaKnown RBP7.82□□□□□ -1.16
CALD1-219ENST00000480638 COA3Q9Y2R0 106 aaPredicted RBP7.82□□□□□ -1.16
CALD1-219ENST00000480638 SIT1Q9Y3P8 196 aa7.82□□□□□ -1.16
CALD1-219ENST00000480638 TRAF6Q9Y4K3 522 aa7.82□□□□□ -1.16
CALD1-219ENST00000480638 TMEM253P0C7T8 217 aa7.81□□□□□ -1.16
CALD1-219ENST00000480638 CDR1P51861 262 aa7.81□□□□□ -1.16
CALD1-219ENST00000480638 DLG4P78352 724 aa7.81□□□□□ -1.16
CALD1-219ENST00000480638 ZNF124Q15973 351 aa7.81□□□□□ -1.16
CALD1-219ENST00000480638 PKN1Q16512 942 aa7.81□□□□□ -1.16
CALD1-219ENST00000480638 KIZQ2M2Z5 673 aa7.81□□□□□ -1.16
CALD1-219ENST00000480638 IFNL3Q8IZI9 196 aa7.81□□□□□ -1.16
CALD1-219ENST00000480638 SH3TC2Q8TF17 1288 aa7.81□□□□□ -1.16
CALD1-219ENST00000480638 PTPRN2Q92932 1015 aa7.81□□□□□ -1.16
CALD1-219ENST00000480638 PLA2G2DQ9UNK4 145 aa7.81□□□□□ -1.16
CALD1-219ENST00000480638 NFIBO00712 420 aa7.8□□□□□ -1.16
CALD1-219ENST00000480638 C1QTNF9P0C862 333 aa7.8□□□□□ -1.16
CALD1-219ENST00000480638 FBLN1P23142 703 aa7.8□□□□□ -1.16
CALD1-219ENST00000480638 GRK2P25098 689 aa7.8□□□□□ -1.16
CALD1-219ENST00000480638 GRK3P35626 688 aa7.8□□□□□ -1.16
CALD1-219ENST00000480638 SLC6A11P48066 632 aa7.8□□□□□ -1.16
CALD1-219ENST00000480638 EPHB3P54753 998 aa7.8□□□□□ -1.16
CALD1-219ENST00000480638 GABREP78334 506 aa7.8□□□□□ -1.16
CALD1-219ENST00000480638 SEC14L1Q92503 715 aa7.8□□□□□ -1.16
CALD1-219ENST00000480638 AP5M1Q9H0R1 490 aa7.8□□□□□ -1.16
CALD1-219ENST00000480638 KANSL2Q9H9L4 492 aa7.8□□□□□ -1.16
CALD1-219ENST00000480638 AQP7O14520 342 aa7.79□□□□□ -1.16
CALD1-219ENST00000480638 SQSTM1Q13501 440 aa7.79□□□□□ -1.16
CALD1-219ENST00000480638 ATG14Q6ZNE5 492 aa7.79□□□□□ -1.16
CALD1-219ENST00000480638 LDHDQ86WU2 507 aa7.79□□□□□ -1.16
CALD1-219ENST00000480638 MZB1Q8WU39 189 aa7.79□□□□□ -1.16
CALD1-219ENST00000480638 EPB41L1Q9H4G0 881 aa7.79□□□□□ -1.16
CALD1-219ENST00000480638 CD320Q9NPF0 282 aa7.79□□□□□ -1.16
CALD1-219ENST00000480638 PCDHA5Q9Y5H7 936 aa7.79□□□□□ -1.16
CALD1-219ENST00000480638 CCDC163A0A0D9SF12 145 aa7.78□□□□□ -1.16
CALD1-219ENST00000480638 TCAF2A6NFQ2 919 aa7.78□□□□□ -1.16
CALD1-219ENST00000480638 N4BP3O15049 544 aa7.78□□□□□ -1.16
CALD1-219ENST00000480638 SGSM2O43147 1006 aa7.78□□□□□ -1.16
CALD1-219ENST00000480638 ZBTB7AO95365 584 aa7.78□□□□□ -1.16
CALD1-219ENST00000480638 RAP1GAPP47736 663 aa7.78□□□□□ -1.16
CALD1-219ENST00000480638 SLC9A5Q14940 896 aa7.78□□□□□ -1.16
CALD1-219ENST00000480638 MTDHQ86UE4 582 aaKnown RBP7.78□□□□□ -1.16
CALD1-219ENST00000480638 ALG3Q92685 438 aa7.78□□□□□ -1.16
CALD1-219ENST00000480638 BCAS3Q9H6U6 928 aa7.78□□□□□ -1.16
CALD1-219ENST00000480638 SLC52A2Q9HAB3 445 aa7.78□□□□□ -1.16
CALD1-219ENST00000480638 IRS2Q9Y4H2 1338 aa7.78□□□□□ -1.16
CALD1-219ENST00000480638 DGKIO75912 1065 aa7.77□□□□□ -1.17
CALD1-219ENST00000480638 NCKAP1LP55160 1127 aa7.77□□□□□ -1.17
CALD1-219ENST00000480638 CHRNA2Q15822 529 aa7.77□□□□□ -1.17
CALD1-219ENST00000480638 TRIM61Q5EBN2 209 aa7.77□□□□□ -1.17
CALD1-219ENST00000480638 IGDCC3Q8IVU1 814 aa7.77□□□□□ -1.17
CALD1-219ENST00000480638 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.77□□□□□ -1.17
CALD1-219ENST00000480638 ALG1Q9BT22 464 aa7.77□□□□□ -1.17
CALD1-219ENST00000480638 JAM3Q9BX67 310 aa7.77□□□□□ -1.17
CALD1-219ENST00000480638 NCOA5Q9HCD5 579 aaKnown RBP7.77□□□□□ -1.17
CALD1-219ENST00000480638 TMEM260Q9NX78 707 aa7.77□□□□□ -1.17
CALD1-219ENST00000480638 NDOR1Q9UHB4 597 aa7.77□□□□□ -1.17
CALD1-219ENST00000480638 ZNF652Q9Y2D9 606 aa7.77□□□□□ -1.17
CALD1-219ENST00000480638 IRS4O14654 1257 aaPredicted RBP7.76□□□□□ -1.17
CALD1-219ENST00000480638 SOD2P04179 222 aa7.76□□□□□ -1.17
CALD1-219ENST00000480638 PMLP29590 882 aa7.76□□□□□ -1.17
CALD1-219ENST00000480638 EMC4Q5J8M3 183 aa7.76□□□□□ -1.17
CALD1-219ENST00000480638 GSTCDQ8NEC7 633 aa7.76□□□□□ -1.17
CALD1-219ENST00000480638 RNPC3Q96LT9 517 aaKnown RBP7.76□□□□□ -1.17
CALD1-219ENST00000480638 MRPL4Q9BYD3 311 aaKnown RBP7.76□□□□□ -1.17
CALD1-219ENST00000480638 RNF38Q9H0F5 515 aa7.76□□□□□ -1.17
CALD1-219ENST00000480638 SFMBT1Q9UHJ3 866 aa7.76□□□□□ -1.17
CALD1-219ENST00000480638 PALD1Q9ULE6 856 aa7.76□□□□□ -1.17
CALD1-219ENST00000480638 SMG5Q9UPR3 1016 aaKnown RBP7.76□□□□□ -1.17
CALD1-219ENST00000480638 EFCAB14O75071 495 aa7.75□□□□□ -1.17
CALD1-219ENST00000480638 ASGR2P07307 311 aa7.75□□□□□ -1.17
CALD1-219ENST00000480638 KCNA10Q16322 511 aa7.75□□□□□ -1.17
CALD1-219ENST00000480638 STEAP3Q658P3 488 aa7.75□□□□□ -1.17
CALD1-219ENST00000480638 JAZF1Q86VZ6 243 aa7.75□□□□□ -1.17
CALD1-219ENST00000480638 SLC7A14Q8TBB6 771 aa7.75□□□□□ -1.17
CALD1-219ENST00000480638 SIGLEC10Q96LC7 697 aa7.75□□□□□ -1.17
CALD1-219ENST00000480638 IPPKQ9H8X2 491 aa7.75□□□□□ -1.17
CALD1-219ENST00000480638 GOLGA2P5Q9HBQ8 144 aa7.75□□□□□ -1.17
CALD1-219ENST00000480638 PCDHA8Q9Y5H6 950 aa7.75□□□□□ -1.17
CALD1-219ENST00000480638 ESYT3A0FGR9 886 aa7.74□□□□□ -1.17
CALD1-219ENST00000480638 FAM47E-STBD1D6RA91 191 aa7.74□□□□□ -1.17
CALD1-219ENST00000480638 ARVCFO00192 962 aa7.74□□□□□ -1.17
CALD1-219ENST00000480638 HGSO14964 777 aaPredicted RBP7.74□□□□□ -1.17
CALD1-219ENST00000480638 BUB1BO60566 1050 aaPredicted RBP7.74□□□□□ -1.17
CALD1-219ENST00000480638 CRTAMO95727 393 aa7.74□□□□□ -1.17
CALD1-219ENST00000480638 NCAM1P13591 858 aa7.74□□□□□ -1.17
CALD1-219ENST00000480638 PFKLP17858 780 aa7.74□□□□□ -1.17
CALD1-219ENST00000480638 NAT1P18440 290 aa7.74□□□□□ -1.17
CALD1-219ENST00000480638 IGFBP6P24592 240 aaPredicted RBP7.74□□□□□ -1.17
CALD1-219ENST00000480638 MC3RP41968 323 aa7.74□□□□□ -1.17
CALD1-219ENST00000480638 LINC00310P59036 64 aa7.74□□□□□ -1.17
CALD1-219ENST00000480638 GUCY1A3Q02108 690 aa7.74□□□□□ -1.17
CALD1-219ENST00000480638 TARBP2Q15633 366 aaKnown RBP7.74□□□□□ -1.17
CALD1-219ENST00000480638 OTOP3Q7RTS5 596 aa7.74□□□□□ -1.17
CALD1-219ENST00000480638 MILR1Q7Z6M3 343 aa7.74□□□□□ -1.17
CALD1-219ENST00000480638 AMIGO3Q86WK7 504 aa7.74□□□□□ -1.17
CALD1-219ENST00000480638 ANKLE2Q86XL3 938 aa7.74□□□□□ -1.17
CALD1-219ENST00000480638 PIP4K2CQ8TBX8 421 aa7.74□□□□□ -1.17
CALD1-219ENST00000480638 KRTAP4-12Q9BQ66 201 aa7.74□□□□□ -1.17
CALD1-219ENST00000480638 IRAK3Q9Y616 596 aa7.74□□□□□ -1.17
CALD1-219ENST00000480638 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms