RNA–Protein interactions for RNA: ENST00000480624.5

MACF1-217, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-217ENST00000480624 PCNX4Q63HM2 1172 aa12.81□□□□□ -0.36
MACF1-217ENST00000480624 DTHD1Q6ZMT9 781 aa12.81□□□□□ -0.36
MACF1-217ENST00000480624 FMR1NBQ8N0W7 255 aaPredicted RBP12.81□□□□□ -0.36
MACF1-217ENST00000480624 ANKRD35Q8N283 1001 aa12.81□□□□□ -0.36
MACF1-217ENST00000480624 ETNPPLQ8TBG4 499 aa12.81□□□□□ -0.36
MACF1-217ENST00000480624 ZFP91Q96JP5 570 aaPredicted RBP12.81□□□□□ -0.36
MACF1-217ENST00000480624 RMDN3Q96TC7 470 aa12.81□□□□□ -0.36
MACF1-217ENST00000480624 EFCC1Q9HA90 598 aa12.81□□□□□ -0.36
MACF1-217ENST00000480624 CREBZFQ9NS37 354 aa12.81□□□□□ -0.36
MACF1-217ENST00000480624 UBIAD1Q9Y5Z9 338 aa12.81□□□□□ -0.36
MACF1-217ENST00000480624 MYH7BA7E2Y1 1941 aa12.81□□□□□ -0.36
MACF1-217ENST00000480624 PFASO15067 1338 aa12.81□□□□□ -0.36
MACF1-217ENST00000480624 SOWAHBA6NEL2 793 aa12.8□□□□□ -0.36
MACF1-217ENST00000480624 TBX3O15119 743 aa12.8□□□□□ -0.36
MACF1-217ENST00000480624 BCRP11274 1271 aa12.8□□□□□ -0.36
MACF1-217ENST00000480624 ITGB5P18084 799 aa12.8□□□□□ -0.36
MACF1-217ENST00000480624 ZNF76P36508 570 aa12.8□□□□□ -0.36
MACF1-217ENST00000480624 LONP1P36776 959 aaKnown RBP12.8□□□□□ -0.36
MACF1-217ENST00000480624 TXKP42681 527 aa12.8□□□□□ -0.36
MACF1-217ENST00000480624 SREBF2Q12772 1141 aa12.8□□□□□ -0.36
MACF1-217ENST00000480624 TAF1CQ15572 869 aaPredicted RBP12.8□□□□□ -0.36
MACF1-217ENST00000480624 DEFB115Q30KQ5 88 aa12.8□□□□□ -0.36
MACF1-217ENST00000480624 CEP55Q53EZ4 464 aa12.8□□□□□ -0.36
MACF1-217ENST00000480624 ARHGEF16Q5VV41 709 aa12.8□□□□□ -0.36
MACF1-217ENST00000480624 CAVIN1Q6NZI2 390 aaKnown RBP12.8□□□□□ -0.36
MACF1-217ENST00000480624 CCDC73Q6ZRK6 1079 aa12.8□□□□□ -0.36
MACF1-217ENST00000480624 VSIG10LQ86VR7 867 aa12.8□□□□□ -0.36
MACF1-217ENST00000480624 FAM133AQ8N9E0 248 aa12.8□□□□□ -0.36
MACF1-217ENST00000480624 NSUN6Q8TEA1 469 aaKnown RBP12.8□□□□□ -0.36
MACF1-217ENST00000480624 GJA10Q969M2 543 aa12.8□□□□□ -0.36
MACF1-217ENST00000480624 EPSTI1Q96J88 318 aa12.8□□□□□ -0.36
MACF1-217ENST00000480624 MXRA8Q9BRK3 442 aa12.8□□□□□ -0.36
MACF1-217ENST00000480624 DACT1Q9NYF0 836 aa12.8□□□□□ -0.36
MACF1-217ENST00000480624 ASTN1O14525 1302 aa12.8□□□□□ -0.36
MACF1-217ENST00000480624 DNAJC25-GNG10A0A024R161 153 aa12.79□□□□□ -0.36
MACF1-217ENST00000480624 POTEB2H3BUK9 544 aa12.79□□□□□ -0.36
MACF1-217ENST00000480624 MSH4O15457 936 aa12.79□□□□□ -0.36
MACF1-217ENST00000480624 NR3C2P08235 984 aa12.79□□□□□ -0.36
MACF1-217ENST00000480624 ARP10275 920 aa12.79□□□□□ -0.36
MACF1-217ENST00000480624 FXR2P51116 673 aaKnown RBP eCLIP12.79□□□□□ -0.361e-6■■■□□ 14.7
MACF1-217ENST00000480624 CCNA1P78396 465 aa12.79□□□□□ -0.36
MACF1-217ENST00000480624 GRM1Q13255 1194 aa12.79□□□□□ -0.36
MACF1-217ENST00000480624 FAM110CQ1W6H9 321 aa12.79□□□□□ -0.36
MACF1-217ENST00000480624 XRRA1Q6P2D8 792 aa12.79□□□□□ -0.36
MACF1-217ENST00000480624 PAXIP1Q6ZW49 1069 aaPredicted RBP12.79□□□□□ -0.36
MACF1-217ENST00000480624 NIPA1Q7RTP0 329 aa12.79□□□□□ -0.36
MACF1-217ENST00000480624 PLA2G4DQ86XP0 818 aa12.79□□□□□ -0.36
MACF1-217ENST00000480624 IGSF22Q8N9C0 903 aa12.79□□□□□ -0.36
MACF1-217ENST00000480624 DNERQ8NFT8 737 aa12.79□□□□□ -0.36
MACF1-217ENST00000480624 SYMPKQ92797 1274 aaKnown RBP12.79□□□□□ -0.36
MACF1-217ENST00000480624 CAPNS2Q96L46 248 aa12.79□□□□□ -0.36
MACF1-217ENST00000480624 FGD4Q96M96 766 aa12.79□□□□□ -0.36
MACF1-217ENST00000480624 UIMC1Q96RL1 719 aa12.79□□□□□ -0.36
MACF1-217ENST00000480624 MMP19Q99542 508 aa12.79□□□□□ -0.36
MACF1-217ENST00000480624 CPA4Q9UI42 421 aa12.79□□□□□ -0.36
MACF1-217ENST00000480624 KCNH3Q9ULD8 1083 aa12.79□□□□□ -0.36
MACF1-217ENST00000480624 A0A087X0B3 334 aa12.78□□□□□ -0.36
MACF1-217ENST00000480624 PP2D1A8MPX8 630 aa12.78□□□□□ -0.36
MACF1-217ENST00000480624 AOC2O75106 756 aa12.78□□□□□ -0.36
MACF1-217ENST00000480624 PGK2P07205 417 aa12.78□□□□□ -0.36
MACF1-217ENST00000480624 FCER1AP12319 257 aa12.78□□□□□ -0.36
MACF1-217ENST00000480624 MYCLP12524 364 aaPredicted RBP12.78□□□□□ -0.36
MACF1-217ENST00000480624 CCND2P30279 289 aa12.78□□□□□ -0.36
MACF1-217ENST00000480624 CDC25AP30304 524 aa12.78□□□□□ -0.36
MACF1-217ENST00000480624 TECP42680 631 aa12.78□□□□□ -0.36
MACF1-217ENST00000480624 NOGQ13253 232 aa12.78□□□□□ -0.36
MACF1-217ENST00000480624 PDIA5Q14554 519 aa12.78□□□□□ -0.36
MACF1-217ENST00000480624 KCTD2Q14681 263 aa12.78□□□□□ -0.36
MACF1-217ENST00000480624 C17orf99Q6UX52 265 aa12.78□□□□□ -0.36
MACF1-217ENST00000480624 SLC5A5Q92911 643 aa12.78□□□□□ -0.36
MACF1-217ENST00000480624 FAM20AQ96MK3 541 aa12.78□□□□□ -0.36
MACF1-217ENST00000480624 IWS1Q96ST2 819 aa12.78□□□□□ -0.36
MACF1-217ENST00000480624 GZF1Q9H116 711 aaPredicted RBP12.78□□□□□ -0.36
MACF1-217ENST00000480624 CLSTN2Q9H4D0 955 aa12.78□□□□□ -0.36
MACF1-217ENST00000480624 TTC12Q9H892 705 aaPredicted RBP12.78□□□□□ -0.36
MACF1-217ENST00000480624 JADE2Q9NQC1 790 aa12.78□□□□□ -0.36
MACF1-217ENST00000480624 DDX19AQ9NUU7 478 aaKnown RBP12.78□□□□□ -0.36
MACF1-217ENST00000480624 FAM13BQ9NYF5 915 aa12.78□□□□□ -0.36
MACF1-217ENST00000480624 TLR2O60603 784 aa12.77□□□□□ -0.37
MACF1-217ENST00000480624 ZNF202O95125 648 aa12.77□□□□□ -0.37
MACF1-217ENST00000480624 SYKP43405 635 aa12.77□□□□□ -0.37
MACF1-217ENST00000480624 ALDH5A1P51649 535 aaPredicted RBP12.77□□□□□ -0.37
MACF1-217ENST00000480624 SPIRE1Q08AE8 756 aa12.77□□□□□ -0.37
MACF1-217ENST00000480624 CCDC183Q5T5S1 534 aa12.77□□□□□ -0.37
MACF1-217ENST00000480624 WDR78Q5VTH9 848 aa12.77□□□□□ -0.37
MACF1-217ENST00000480624 SLFN12Q8IYM2 578 aa12.77□□□□□ -0.37
MACF1-217ENST00000480624 AK8Q96MA6 479 aa12.77□□□□□ -0.37
MACF1-217ENST00000480624 MMTAG2Q9BU76 263 aaKnown RBP12.77□□□□□ -0.37
MACF1-217ENST00000480624 PANK2Q9BZ23 570 aa12.77□□□□□ -0.37
MACF1-217ENST00000480624 WDR11Q9BZH6 1224 aa12.77□□□□□ -0.37
MACF1-217ENST00000480624 ZFYVE28Q9HCC9 887 aa12.77□□□□□ -0.37
MACF1-217ENST00000480624 PCDHA12Q9UN75 941 aa12.77□□□□□ -0.37
MACF1-217ENST00000480624 LCTP09848 1927 aa12.77□□□□□ -0.37
MACF1-217ENST00000480624 CA12O43570 354 aa12.76□□□□□ -0.37
MACF1-217ENST00000480624 STRNO43815 780 aa12.76□□□□□ -0.37
MACF1-217ENST00000480624 MARCH6O60337 910 aa12.76□□□□□ -0.37
MACF1-217ENST00000480624 PSMD10O75832 226 aa12.76□□□□□ -0.37
MACF1-217ENST00000480624 RGS20O76081 388 aa12.76□□□□□ -0.37
MACF1-217ENST00000480624 EDNRBP24530 442 aa12.76□□□□□ -0.37
MACF1-217ENST00000480624 SETQ01105 290 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms