RNA–Protein interactions for RNA: ENST00000480563.1

TTC28-206, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 407 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-206ENST00000480563 PI4K2BQ8TCG2 481 aa13.29□□□□□ -0.28
TTC28-206ENST00000480563 HDAC6Q9UBN7 1215 aa13.29□□□□□ -0.28
TTC28-206ENST00000480563 GTF2IRD1Q9UHL9 959 aa13.29□□□□□ -0.28
TTC28-206ENST00000480563 WDR19Q8NEZ3 1342 aa13.29□□□□□ -0.28
TTC28-206ENST00000480563 TANC1Q9C0D5 1861 aa13.29□□□□□ -0.28
TTC28-206ENST00000480563 GRXCR2A6NFK2 248 aa13.28□□□□□ -0.28
TTC28-206ENST00000480563 RBAK-RBAKDNI3L0D1 243 aa13.28□□□□□ -0.28
TTC28-206ENST00000480563 PDHBP11177 359 aa13.28□□□□□ -0.28
TTC28-206ENST00000480563 ZNF543Q08ER8 600 aa13.28□□□□□ -0.28
TTC28-206ENST00000480563 CSPP1Q1MSJ5 1256 aa13.28□□□□□ -0.28
TTC28-206ENST00000480563 USH1GQ495M9 461 aa13.28□□□□□ -0.28
TTC28-206ENST00000480563 C20orf194Q5TEA3 1177 aa13.28□□□□□ -0.28
TTC28-206ENST00000480563 VPS53Q5VIR6 699 aa13.28□□□□□ -0.28
TTC28-206ENST00000480563 RGS22Q8NE09 1264 aa13.28□□□□□ -0.28
TTC28-206ENST00000480563 FBXO22Q8NEZ5 403 aa13.28□□□□□ -0.28
TTC28-206ENST00000480563 C17orf80Q9BSJ5 609 aa13.28□□□□□ -0.28
TTC28-206ENST00000480563 ALG1Q9BT22 464 aa13.28□□□□□ -0.28
TTC28-206ENST00000480563 TCP11L1Q9NUJ3 509 aa13.28□□□□□ -0.28
TTC28-206ENST00000480563 INSL6Q9Y581 213 aa13.28□□□□□ -0.28
TTC28-206ENST00000480563 COL4A4P53420 1690 aaPredicted RBP13.28□□□□□ -0.28
TTC28-206ENST00000480563 PSEN2P49810 448 aa13.27□□□□□ -0.29
TTC28-206ENST00000480563 MRE11P49959 708 aa13.27□□□□□ -0.29
TTC28-206ENST00000480563 PTK7Q13308 1070 aa13.27□□□□□ -0.29
TTC28-206ENST00000480563 DGKDQ16760 1214 aa13.27□□□□□ -0.29
TTC28-206ENST00000480563 PUS10Q3MIT2 529 aaKnown RBP13.27□□□□□ -0.29
TTC28-206ENST00000480563 ZNF618Q5T7W0 954 aa13.27□□□□□ -0.29
TTC28-206ENST00000480563 TRAF7Q6Q0C0 670 aa13.27□□□□□ -0.29
TTC28-206ENST00000480563 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.27□□□□□ -0.29
TTC28-206ENST00000480563 TBC1D5Q92609 795 aa13.27□□□□□ -0.29
TTC28-206ENST00000480563 TAAR1Q96RJ0 339 aa13.27□□□□□ -0.29
TTC28-206ENST00000480563 CTNNA3Q9UI47 895 aa13.27□□□□□ -0.29
TTC28-206ENST00000480563 POTEB3A0JP26 581 aa13.26□□□□□ -0.29
TTC28-206ENST00000480563 H3BQ06 376 aaPredicted RBP13.26□□□□□ -0.29
TTC28-206ENST00000480563 LGR5O75473 907 aa13.26□□□□□ -0.29
TTC28-206ENST00000480563 SNHG28P0DPA3 235 aa13.26□□□□□ -0.29
TTC28-206ENST00000480563 PTPRSQ13332 1948 aa13.26□□□□□ -0.29
TTC28-206ENST00000480563 TRIP12Q14669 1992 aaPredicted RBP13.26□□□□□ -0.29
TTC28-206ENST00000480563 MBTPS1Q14703 1052 aa13.26□□□□□ -0.29
TTC28-206ENST00000480563 MFSD10Q14728 455 aa13.26□□□□□ -0.29
TTC28-206ENST00000480563 ALX1Q15699 326 aa13.26□□□□□ -0.29
TTC28-206ENST00000480563 STXBP2Q15833 593 aa13.26□□□□□ -0.29
TTC28-206ENST00000480563 PTPROQ16827 1216 aa13.26□□□□□ -0.29
TTC28-206ENST00000480563 TRIM71Q2Q1W2 868 aaKnown RBP13.26□□□□□ -0.29
TTC28-206ENST00000480563 POTEBQ6S5H4 581 aa13.26□□□□□ -0.29
TTC28-206ENST00000480563 NEK9Q8TD19 979 aa13.26□□□□□ -0.29
TTC28-206ENST00000480563 SYTL5Q8TDW5 730 aaPredicted RBP13.26□□□□□ -0.29
TTC28-206ENST00000480563 OTUD7AQ8TE49 926 aaPredicted RBP13.26□□□□□ -0.29
TTC28-206ENST00000480563 NSUN6Q8TEA1 469 aaKnown RBP13.26□□□□□ -0.29
TTC28-206ENST00000480563 WNT8BQ93098 351 aa13.26□□□□□ -0.29
TTC28-206ENST00000480563 MRPL38Q96DV4 380 aaKnown RBP13.26□□□□□ -0.29
TTC28-206ENST00000480563 TTC14Q96N46 770 aa13.26□□□□□ -0.29
TTC28-206ENST00000480563 DDX41Q9UJV9 622 aaKnown RBP13.26□□□□□ -0.29
TTC28-206ENST00000480563 RCAN3Q9UKA8 241 aa13.26□□□□□ -0.29
TTC28-206ENST00000480563 HAS3O00219 553 aa13.25□□□□□ -0.29
TTC28-206ENST00000480563 DCXO43602 365 aa13.25□□□□□ -0.29
TTC28-206ENST00000480563 FGAP02671 866 aa13.25□□□□□ -0.29
TTC28-206ENST00000480563 AMHP03971 560 aa13.25□□□□□ -0.29
TTC28-206ENST00000480563 GOLGA8HP0CJ92 632 aa13.25□□□□□ -0.29
TTC28-206ENST00000480563 HTRA4P83105 476 aaPredicted RBP13.25□□□□□ -0.29
TTC28-206ENST00000480563 ZNF200P98182 395 aaPredicted RBP13.25□□□□□ -0.29
TTC28-206ENST00000480563 NHLH1Q02575 133 aa13.25□□□□□ -0.29
TTC28-206ENST00000480563 KIAA0753Q2KHM9 967 aa13.25□□□□□ -0.29
TTC28-206ENST00000480563 MYOCDQ8IZQ8 938 aa13.25□□□□□ -0.29
TTC28-206ENST00000480563 DBF4BQ8NFT6 615 aa13.25□□□□□ -0.29
TTC28-206ENST00000480563 EMID1Q96A84 441 aaPredicted RBP13.25□□□□□ -0.29
TTC28-206ENST00000480563 IWS1Q96ST2 819 aa13.25□□□□□ -0.29
TTC28-206ENST00000480563 RMDN3Q96TC7 470 aa13.25□□□□□ -0.29
TTC28-206ENST00000480563 KATNAL1Q9BW62 490 aa13.25□□□□□ -0.29
TTC28-206ENST00000480563 UBA5Q9GZZ9 404 aa13.25□□□□□ -0.29
TTC28-206ENST00000480563 MAF1Q9H063 256 aa13.25□□□□□ -0.29
TTC28-206ENST00000480563 EIF3JO75822 258 aaKnown RBP13.24□□□□□ -0.29
TTC28-206ENST00000480563 F2P00734 622 aa13.24□□□□□ -0.29
TTC28-206ENST00000480563 ZNF286BP0CG31 522 aa13.24□□□□□ -0.29
TTC28-206ENST00000480563 LAMC2Q13753 1193 aa13.24□□□□□ -0.29
TTC28-206ENST00000480563 EPC2Q52LR7 807 aa13.24□□□□□ -0.29
TTC28-206ENST00000480563 GPATCH4Q5T3I0 446 aaKnown RBP13.24□□□□□ -0.29
TTC28-206ENST00000480563 EP400NLQ6ZTU2 488 aa13.24□□□□□ -0.29
TTC28-206ENST00000480563 BANK1Q8NDB2 785 aa13.24□□□□□ -0.29
TTC28-206ENST00000480563 SP7Q8TDD2 431 aaPredicted RBP13.24□□□□□ -0.29
TTC28-206ENST00000480563 FBXL18Q96ME1 805 aa13.24□□□□□ -0.29
TTC28-206ENST00000480563 SAMD11Q96NU1 681 aa13.24□□□□□ -0.29
TTC28-206ENST00000480563 CPVLQ9H3G5 476 aa13.24□□□□□ -0.29
TTC28-206ENST00000480563 COL20A1Q9P218 1284 aa13.24□□□□□ -0.29
TTC28-206ENST00000480563 ABCB11O95342 1321 aa13.23□□□□□ -0.29
TTC28-206ENST00000480563 EMSYQ7Z589 1322 aa13.23□□□□□ -0.29
TTC28-206ENST00000480563 RSPH10B2B2RC85 870 aa13.23□□□□□ -0.29
TTC28-206ENST00000480563 H3BNC9 293 aa13.23□□□□□ -0.29
TTC28-206ENST00000480563 RSPH10BP0C881 870 aa13.23□□□□□ -0.29
TTC28-206ENST00000480563 MKRN4PQ13434 485 aaPredicted RBP13.23□□□□□ -0.29
TTC28-206ENST00000480563 GPM6BQ13491 265 aa13.23□□□□□ -0.29
TTC28-206ENST00000480563 HIC1Q14526 733 aa13.23□□□□□ -0.29
TTC28-206ENST00000480563 TIGD5Q53EQ6 642 aa13.23□□□□□ -0.29
TTC28-206ENST00000480563 TCEAL5Q5H9L2 206 aa13.23□□□□□ -0.29
TTC28-206ENST00000480563 ARHGEF16Q5VV41 709 aa13.23□□□□□ -0.29
TTC28-206ENST00000480563 MCF2L2Q86YR7 1114 aa13.23□□□□□ -0.29
TTC28-206ENST00000480563 DHX37Q8IY37 1157 aaKnown RBP13.23□□□□□ -0.29
TTC28-206ENST00000480563 MIER1Q8N108 512 aa13.23□□□□□ -0.29
TTC28-206ENST00000480563 PPTC7Q8NI37 304 aa13.23□□□□□ -0.29
TTC28-206ENST00000480563 PABPC5Q96DU9 382 aaKnown RBP13.23□□□□□ -0.29
TTC28-206ENST00000480563 KCNH6Q9H252 994 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms