RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 PRDM6Q9NQX0 595 aa21.91■■□□□ 1.1
ABCF3-214ENST00000480562 NOD1Q9Y239 953 aa21.91■■□□□ 1.1
ABCF3-214ENST00000480562 TAF6LQ9Y6J9 622 aa21.91■■□□□ 1.1
ABCF3-214ENST00000480562 IFIT3O14879 490 aaKnown RBP21.9■■□□□ 1.1
ABCF3-214ENST00000480562 EIF3JO75822 258 aaKnown RBP21.9■■□□□ 1.1
ABCF3-214ENST00000480562 IQCF3P0C7M6 154 aa21.9■■□□□ 1.1
ABCF3-214ENST00000480562 ATP2A2P16615 1042 aaKnown RBP21.9■■□□□ 1.1
ABCF3-214ENST00000480562 HOXA13P31271 388 aaPredicted RBP21.9■■□□□ 1.1
ABCF3-214ENST00000480562 PTGISQ16647 500 aa21.9■■□□□ 1.1
ABCF3-214ENST00000480562 HOMER1Q86YM7 354 aa21.9■■□□□ 1.1
ABCF3-214ENST00000480562 RUFY2Q8WXA3 655 aa21.9■■□□□ 1.1
ABCF3-214ENST00000480562 KAT2BQ92831 832 aa21.9■■□□□ 1.1
ABCF3-214ENST00000480562 PCDHA1Q9Y5I3 950 aa21.9■■□□□ 1.1
ABCF3-214ENST00000480562 MRVI1Q9Y6F6 885 aa21.9■■□□□ 1.1
ABCF3-214ENST00000480562 U3KPZ7 1027 aaPredicted RBP21.9■■□□□ 1.1
ABCF3-214ENST00000480562 KIAA1217Q5T5P2 1943 aa21.9■■□□□ 1.1
ABCF3-214ENST00000480562 CHD7Q9P2D1 2997 aa21.89■■□□□ 1.1
ABCF3-214ENST00000480562 PITPNM1O00562 1244 aa21.89■■□□□ 1.09
ABCF3-214ENST00000480562 MYCLP12524 364 aaPredicted RBP21.89■■□□□ 1.09
ABCF3-214ENST00000480562 CASTP20810 708 aaKnown RBP21.89■■□□□ 1.09
ABCF3-214ENST00000480562 IGFBP4P22692 258 aa21.89■■□□□ 1.09
ABCF3-214ENST00000480562 BFSP2Q13515 415 aa21.89■■□□□ 1.09
ABCF3-214ENST00000480562 GRM4Q14833 912 aa21.89■■□□□ 1.09
ABCF3-214ENST00000480562 GDF6Q6KF10 455 aaPredicted RBP21.89■■□□□ 1.09
ABCF3-214ENST00000480562 PIGSQ96S52 555 aa21.89■■□□□ 1.09
ABCF3-214ENST00000480562 PCDHA11Q9Y5I1 949 aa21.89■■□□□ 1.09
ABCF3-214ENST00000480562 RFC2P35250 354 aa21.88■■□□□ 1.09
ABCF3-214ENST00000480562 GHRHRQ02643 423 aa21.88■■□□□ 1.09
ABCF3-214ENST00000480562 CCDC85BQ15834 202 aaPredicted RBP21.88■■□□□ 1.09
ABCF3-214ENST00000480562 PPP2R2DQ66LE6 453 aa21.88■■□□□ 1.09
ABCF3-214ENST00000480562 CTAGE1Q96RT6 745 aa21.88■■□□□ 1.09
ABCF3-214ENST00000480562 PDCD2LQ9BRP1 358 aa21.88■■□□□ 1.09
ABCF3-214ENST00000480562 FTOQ9C0B1 505 aaKnown RBP eCLIP21.88■■□□□ 1.09
ABCF3-214ENST00000480562 SPTBN5Q9NRC6 3674 aaKnown RBP21.87■■□□□ 1.09
ABCF3-214ENST00000480562 E7EWF7 191 aa21.87■■□□□ 1.09
ABCF3-214ENST00000480562 SORBS3O60504 671 aa21.87■■□□□ 1.09
ABCF3-214ENST00000480562 ACTN1P12814 892 aa21.87■■□□□ 1.09
ABCF3-214ENST00000480562 DGKDQ16760 1214 aa21.87■■□□□ 1.09
ABCF3-214ENST00000480562 STOX1Q6ZVD7 989 aa21.87■■□□□ 1.09
ABCF3-214ENST00000480562 RALYLQ86SE5 291 aaKnown RBP21.87■■□□□ 1.09
ABCF3-214ENST00000480562 IL31RAQ8NI17 732 aa21.87■■□□□ 1.09
ABCF3-214ENST00000480562 ZFP91Q96JP5 570 aaPredicted RBP21.87■■□□□ 1.09
ABCF3-214ENST00000480562 ERICH2A1L162 156 aa21.86■■□□□ 1.09
ABCF3-214ENST00000480562 RGS20O76081 388 aa21.86■■□□□ 1.09
ABCF3-214ENST00000480562 LAMC2Q13753 1193 aa21.86■■□□□ 1.09
ABCF3-214ENST00000480562 WTAPQ15007 396 aa21.86■■□□□ 1.09
ABCF3-214ENST00000480562 SESTD1Q86VW0 696 aa21.86■■□□□ 1.09
ABCF3-214ENST00000480562 DHX37Q8IY37 1157 aaKnown RBP21.86■■□□□ 1.09
ABCF3-214ENST00000480562 NCOA7Q8NI08 942 aa21.86■■□□□ 1.09
ABCF3-214ENST00000480562 EMID1Q96A84 441 aaPredicted RBP21.86■■□□□ 1.09
ABCF3-214ENST00000480562 ALG1Q9BT22 464 aa21.86■■□□□ 1.09
ABCF3-214ENST00000480562 RIOX1Q9H6W3 641 aa21.86■■□□□ 1.09
ABCF3-214ENST00000480562 HDAC6Q9UBN7 1215 aa21.86■■□□□ 1.09
ABCF3-214ENST00000480562 BAZ2BQ9UIF8 2168 aaKnown RBP21.86■■□□□ 1.09
ABCF3-214ENST00000480562 TANC1Q9C0D5 1861 aa21.86■■□□□ 1.09
ABCF3-214ENST00000480562 SGSM2O43147 1006 aa21.85■■□□□ 1.09
ABCF3-214ENST00000480562 CYTH3O43739 400 aa21.85■■□□□ 1.09
ABCF3-214ENST00000480562 ZNF286BP0CG31 522 aa21.85■■□□□ 1.09
ABCF3-214ENST00000480562 PSEN2P49810 448 aa21.85■■□□□ 1.09
ABCF3-214ENST00000480562 TMEM67Q5HYA8 995 aa21.85■■□□□ 1.09
ABCF3-214ENST00000480562 FCHSD1Q86WN1 690 aa21.85■■□□□ 1.09
ABCF3-214ENST00000480562 PIBF1Q8WXW3 757 aa21.85■■□□□ 1.09
ABCF3-214ENST00000480562 DHX38Q92620 1227 aaKnown RBP21.85■■□□□ 1.09
ABCF3-214ENST00000480562 MAP3K20Q9NYL2 800 aaKnown RBP21.85■■□□□ 1.09
ABCF3-214ENST00000480562 TRIP12Q14669 1992 aaPredicted RBP21.85■■□□□ 1.09
ABCF3-214ENST00000480562 TET1Q8NFU7 2136 aa21.85■■□□□ 1.09
ABCF3-214ENST00000480562 TTC28Q96AY4 2481 aa21.84■■□□□ 1.09
ABCF3-214ENST00000480562 GCOM1H8Y6P7 765 aaPredicted RBP21.84■■□□□ 1.09
ABCF3-214ENST00000480562 RBAK-RBAKDNI3L0D1 243 aa21.84■■□□□ 1.09
ABCF3-214ENST00000480562 CA3P07451 260 aa21.84■■□□□ 1.09
ABCF3-214ENST00000480562 POLR2MP0CAP2 368 aa21.84■■□□□ 1.09
ABCF3-214ENST00000480562 ANTXR2P58335 489 aa21.84■■□□□ 1.09
ABCF3-214ENST00000480562 TROAPQ12815 778 aa21.84■■□□□ 1.09
ABCF3-214ENST00000480562 MFSD10Q14728 455 aa21.84■■□□□ 1.09
ABCF3-214ENST00000480562 PGM5Q15124 567 aa21.84■■□□□ 1.09
ABCF3-214ENST00000480562 VSIG10LQ86VR7 867 aa21.84■■□□□ 1.09
ABCF3-214ENST00000480562 CCDC155Q8N6L0 562 aa21.84■■□□□ 1.09
ABCF3-214ENST00000480562 C7orf31Q8N865 590 aa21.84■■□□□ 1.09
ABCF3-214ENST00000480562 PPTC7Q8NI37 304 aa21.84■■□□□ 1.09
ABCF3-214ENST00000480562 CAGE1Q8TC20 777 aa21.84■■□□□ 1.09
ABCF3-214ENST00000480562 GTF2IRD1Q9UHL9 959 aa21.84■■□□□ 1.09
ABCF3-214ENST00000480562 MYH7BA7E2Y1 1941 aa21.83■■□□□ 1.09
ABCF3-214ENST00000480562 PNMA6FA0A0J9YX94 578 aa21.83■■□□□ 1.09
ABCF3-214ENST00000480562 GPNMBQ14956 572 aa21.83■■□□□ 1.09
ABCF3-214ENST00000480562 SART3Q15020 963 aaKnown RBP21.83■■□□□ 1.09
ABCF3-214ENST00000480562 KIAA0753Q2KHM9 967 aa21.83■■□□□ 1.09
ABCF3-214ENST00000480562 TJAP1Q5JTD0 557 aa21.83■■□□□ 1.09
ABCF3-214ENST00000480562 MYSM1Q5VVJ2 828 aa21.83■■□□□ 1.09
ABCF3-214ENST00000480562 AFAP1L1Q8TED9 768 aa21.83■■□□□ 1.09
ABCF3-214ENST00000480562 GPKOWQ92917 476 aaPredicted RBP eCLIP21.83■■□□□ 1.09
ABCF3-214ENST00000480562 SLC9A7Q96T83 725 aa21.83■■□□□ 1.09
ABCF3-214ENST00000480562 CERS4Q9HA82 394 aa21.83■■□□□ 1.09
ABCF3-214ENST00000480562 RFXAPO00287 272 aa21.82■■□□□ 1.08
ABCF3-214ENST00000480562 GGPS1O95749 300 aa21.82■■□□□ 1.08
ABCF3-214ENST00000480562 F2P00734 622 aa21.82■■□□□ 1.08
ABCF3-214ENST00000480562 SELPP16109 830 aa21.82■■□□□ 1.08
ABCF3-214ENST00000480562 SP2Q02086 613 aa21.82■■□□□ 1.08
ABCF3-214ENST00000480562 CELF3Q5SZQ8 465 aaKnown RBP21.82■■□□□ 1.08
ABCF3-214ENST00000480562 LRRC8DQ7L1W4 858 aa21.82■■□□□ 1.08
ABCF3-214ENST00000480562 CATIPQ7Z7H3 387 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms