RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 TSC22D3Q99576 134 aa6.67□□□□□ -1.34
PRPF4B-205ENST00000480058 KIFC3Q9BVG8 833 aa6.67□□□□□ -1.34
PRPF4B-205ENST00000480058 KIAA1586Q9HCI6 787 aa6.67□□□□□ -1.34
PRPF4B-205ENST00000480058 SRRM3A6NNA2 597 aaPredicted RBP6.67□□□□□ -1.34
PRPF4B-205ENST00000480058 RWDD2BP57060 319 aa6.67□□□□□ -1.34
PRPF4B-205ENST00000480058 CATSPER1Q8NEC5 780 aa6.67□□□□□ -1.34
PRPF4B-205ENST00000480058 NACC1Q96RE7 527 aa6.67□□□□□ -1.34
PRPF4B-205ENST00000480058 MTRQ99707 1265 aa6.67□□□□□ -1.34
PRPF4B-205ENST00000480058 ITIH6Q6UXX5 1313 aa6.67□□□□□ -1.34
PRPF4B-205ENST00000480058 ARHGEF37A1IGU5 675 aa6.67□□□□□ -1.34
PRPF4B-205ENST00000480058 OPHN1O60890 802 aa6.67□□□□□ -1.34
PRPF4B-205ENST00000480058 CRCPO75575 148 aa6.67□□□□□ -1.34
PRPF4B-205ENST00000480058 STX1BP61266 288 aa6.67□□□□□ -1.34
PRPF4B-205ENST00000480058 YY1AP1Q9H869 796 aa6.67□□□□□ -1.34
PRPF4B-205ENST00000480058 CCDC87Q9NVE4 849 aa6.67□□□□□ -1.34
PRPF4B-205ENST00000480058 NRBP1Q9UHY1 535 aa6.67□□□□□ -1.34
PRPF4B-205ENST00000480058 TUBE1Q9UJT0 475 aa6.67□□□□□ -1.34
PRPF4B-205ENST00000480058 GGA1Q9UJY5 639 aa6.67□□□□□ -1.34
PRPF4B-205ENST00000480058 PCDHA4Q9UN74 947 aa6.67□□□□□ -1.34
PRPF4B-205ENST00000480058 CFAP43Q8NDM7 1665 aa6.67□□□□□ -1.34
PRPF4B-205ENST00000480058 ABCB11O95342 1321 aa6.67□□□□□ -1.34
PRPF4B-205ENST00000480058 IQANK1A0A1B0GTG1 560 aa6.67□□□□□ -1.34
PRPF4B-205ENST00000480058 MT-ND3P03897 115 aa6.67□□□□□ -1.34
PRPF4B-205ENST00000480058 TNFAIP1Q13829 316 aa6.67□□□□□ -1.34
PRPF4B-205ENST00000480058 DHX34Q14147 1143 aaKnown RBP6.67□□□□□ -1.34
PRPF4B-205ENST00000480058 ADCK5Q3MIX3 580 aa6.67□□□□□ -1.34
PRPF4B-205ENST00000480058 SH3GL3Q99963 347 aa6.67□□□□□ -1.34
PRPF4B-205ENST00000480058 PSTPIP2Q9H939 334 aa6.67□□□□□ -1.34
PRPF4B-205ENST00000480058 CEP72Q9P209 647 aa6.67□□□□□ -1.34
PRPF4B-205ENST00000480058 PRDM1O75626 825 aa6.67□□□□□ -1.34
PRPF4B-205ENST00000480058 CA4P22748 312 aa6.67□□□□□ -1.34
PRPF4B-205ENST00000480058 IGBP1P78318 339 aa6.67□□□□□ -1.34
PRPF4B-205ENST00000480058 GEN1Q17RS7 908 aa6.67□□□□□ -1.34
PRPF4B-205ENST00000480058 KMT5BQ4FZB7 885 aa6.67□□□□□ -1.34
PRPF4B-205ENST00000480058 UNC13DQ70J99 1090 aa6.67□□□□□ -1.34
PRPF4B-205ENST00000480058 DYMQ7RTS9 669 aa6.67□□□□□ -1.34
PRPF4B-205ENST00000480058 RBM41Q96IZ5 413 aaKnown RBP6.67□□□□□ -1.34
PRPF4B-205ENST00000480058 ATP6V1G3Q96LB4 118 aa6.67□□□□□ -1.34
PRPF4B-205ENST00000480058 ZMAT2Q96NC0 199 aaKnown RBP6.67□□□□□ -1.34
PRPF4B-205ENST00000480058 BRIP1Q9BX63 1249 aa6.67□□□□□ -1.34
PRPF4B-205ENST00000480058 FRMD8Q9BZ67 464 aaPredicted RBP6.67□□□□□ -1.34
PRPF4B-205ENST00000480058 ZMYND12Q9H0C1 365 aa6.67□□□□□ -1.34
PRPF4B-205ENST00000480058 SH2B2O14492 632 aaPredicted RBP6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 ESRRAP11474 423 aaPredicted RBP6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 IL6STP40189 918 aaPredicted RBP6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 MRPS35P82673 323 aaKnown RBP6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 AP3B2Q13367 1082 aa6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 RESP18Q5W5W9 173 aa6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 PPP1R18Q6NYC8 613 aa6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 CENPUQ71F23 418 aa6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 FAM186BQ8IYM0 893 aa6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 RBL2Q08999 1139 aa6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 CUL4BQ13620 913 aa6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 TCP11X2Q5H9J9 407 aa6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 RINT1Q6NUQ1 792 aa6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 SYDE1Q6ZW31 735 aaPredicted RBP6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 ENOSF1Q7L5Y1 443 aa6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 HELBQ8NG08 1087 aaPredicted RBP6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 CHMP6Q96FZ7 201 aa6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 RBM17Q96I25 401 aaKnown RBP6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 DPH5Q9H2P9 285 aa6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 AZI2Q9H6S1 392 aa6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 MAN1B1Q9UKM7 699 aa6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 ZHX2Q9Y6X8 837 aa6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 NCAPD2Q15021 1401 aa6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 PPP1R12AO14974 1030 aaPredicted RBP6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 ATF7P17544 494 aaPredicted RBP6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 EIF4A3P38919 411 aaKnown RBP6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 MSH2P43246 934 aa6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 PLTPP55058 493 aa6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 PDE1BQ01064 536 aa6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 SLC20A2Q08357 652 aa6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 RAD51AP2Q09MP3 1159 aa6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 ZNF827Q17R98 1081 aa6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 JDP2Q8WYK2 163 aa6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 VPS39Q96JC1 886 aa6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 LEMD3Q9Y2U8 911 aa6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 BICRAQ9NZM4 1560 aa6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 ERVV-1B6SEH8 477 aa6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 ZBED4O75132 1171 aa6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 AGTP01019 485 aa6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 KRT31Q15323 416 aa6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 KLHL38Q2WGJ6 581 aa6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 NCAPH2Q6IBW4 605 aa6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 AGGF1Q8N302 714 aaeCLIP6.66□□□□□ -1.342e-8■□□□□ 9.3
PRPF4B-205ENST00000480058 MB21D1Q8N884 522 aa6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 CNBD1Q8NA66 436 aa6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 PSMB7Q99436 277 aa6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 IPO11Q9UI26 975 aaKnown RBP6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 MDM2Q00987 491 aaPredicted RBP6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 FSCBQ5H9T9 825 aa6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 NELFCDQ8IXH7 590 aa6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 BBS5Q8N3I7 341 aa6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 TMCO5AQ8N6Q1 288 aa6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 PANK4Q9NVE7 773 aa6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 SMG5Q9UPR3 1016 aaKnown RBP6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 MRFAP1Q9Y605 127 aa6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 NEO1Q92859 1461 aa6.66□□□□□ -1.34
PRPF4B-205ENST00000480058 HMGB3O15347 200 aaKnown RBP6.65□□□□□ -1.34
PRPF4B-205ENST00000480058 DAPK3O43293 454 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms