RNA–Protein interactions for RNA: ENST00000480055.5

SMURF1-204, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene SMURF1, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-204ENST00000480055 TNKSO95271 1327 aa12.19□□□□□ -0.46
SMURF1-204ENST00000480055 TTC41PQ6P2S7 1318 aa12.19□□□□□ -0.46
SMURF1-204ENST00000480055 PTPDC1A2A3K4 754 aa12.19□□□□□ -0.46
SMURF1-204ENST00000480055 TLL1O43897 1013 aa12.19□□□□□ -0.46
SMURF1-204ENST00000480055 NMT2O60551 498 aa12.19□□□□□ -0.46
SMURF1-204ENST00000480055 MYL3P08590 195 aa12.19□□□□□ -0.46
SMURF1-204ENST00000480055 TMEM63BQ5T3F8 832 aa12.19□□□□□ -0.46
SMURF1-204ENST00000480055 MORC4Q8TE76 937 aa12.19□□□□□ -0.46
SMURF1-204ENST00000480055 PURBQ96QR8 312 aaKnown RBP12.19□□□□□ -0.46
SMURF1-204ENST00000480055 VTA1Q9NP79 307 aa12.19□□□□□ -0.46
SMURF1-204ENST00000480055 INCENPQ9NQS7 918 aa12.19□□□□□ -0.46
SMURF1-204ENST00000480055 TRMT13Q9NUP7 481 aaKnown RBP12.19□□□□□ -0.46
SMURF1-204ENST00000480055 ADD3Q9UEY8 706 aaKnown RBP12.19□□□□□ -0.46
SMURF1-204ENST00000480055 PLA2G6O60733 806 aa12.18□□□□□ -0.46
SMURF1-204ENST00000480055 ARHGEF15O94989 841 aa12.18□□□□□ -0.46
SMURF1-204ENST00000480055 ICAM1P05362 532 aa12.18□□□□□ -0.46
SMURF1-204ENST00000480055 SUPT20HL2P0C7V6 817 aa12.18□□□□□ -0.46
SMURF1-204ENST00000480055 CYP2C9P11712 490 aa12.18□□□□□ -0.46
SMURF1-204ENST00000480055 ACTN1P12814 892 aa12.18□□□□□ -0.46
SMURF1-204ENST00000480055 RFC2P35250 354 aa12.18□□□□□ -0.46
SMURF1-204ENST00000480055 SLC16A2P36021 539 aa12.18□□□□□ -0.46
SMURF1-204ENST00000480055 TAP1Q03518 808 aa12.18□□□□□ -0.46
SMURF1-204ENST00000480055 BAATQ14032 418 aaPredicted RBP12.18□□□□□ -0.46
SMURF1-204ENST00000480055 DUSP28Q4G0W2 176 aa12.18□□□□□ -0.46
SMURF1-204ENST00000480055 FAM47CQ5HY64 1035 aa12.18□□□□□ -0.46
SMURF1-204ENST00000480055 TMEM31Q5JXX7 168 aa12.18□□□□□ -0.46
SMURF1-204ENST00000480055 ZMYM1Q5SVZ6 1142 aa12.18□□□□□ -0.46
SMURF1-204ENST00000480055 KRT40Q6A162 431 aa12.18□□□□□ -0.46
SMURF1-204ENST00000480055 DEFB128Q7Z7B8 93 aa12.18□□□□□ -0.46
SMURF1-204ENST00000480055 PHOSPHO2Q8TCD6 241 aa12.18□□□□□ -0.46
SMURF1-204ENST00000480055 WDR11Q9BZH6 1224 aa12.18□□□□□ -0.46
SMURF1-204ENST00000480055 CERS4Q9HA82 394 aa12.18□□□□□ -0.46
SMURF1-204ENST00000480055 C11orf16Q9NQ32 467 aa12.18□□□□□ -0.46
SMURF1-204ENST00000480055 NPDC1Q9NQX5 325 aaPredicted RBP12.18□□□□□ -0.46
SMURF1-204ENST00000480055 IL17RBQ9NRM6 502 aa12.18□□□□□ -0.46
SMURF1-204ENST00000480055 POLR3EQ9NVU0 708 aa12.18□□□□□ -0.46
SMURF1-204ENST00000480055 RALGAPA2Q2PPJ7 1873 aa12.17□□□□□ -0.46
SMURF1-204ENST00000480055 GPR37L1O60883 481 aa12.17□□□□□ -0.46
SMURF1-204ENST00000480055 CALML3P27482 149 aa12.17□□□□□ -0.46
SMURF1-204ENST00000480055 CPT1AP50416 773 aa12.17□□□□□ -0.46
SMURF1-204ENST00000480055 PRSS12P56730 875 aa12.17□□□□□ -0.46
SMURF1-204ENST00000480055 CHMP4BP1P59074 171 aa12.17□□□□□ -0.46
SMURF1-204ENST00000480055 PURAQ00577 322 aaKnown RBP12.17□□□□□ -0.46
SMURF1-204ENST00000480055 HIC1Q14526 733 aa12.17□□□□□ -0.46
SMURF1-204ENST00000480055 BRDTQ58F21 947 aaPredicted RBP12.17□□□□□ -0.46
SMURF1-204ENST00000480055 RRP12Q5JTH9 1297 aaKnown RBP12.17□□□□□ -0.46
SMURF1-204ENST00000480055 RASGRP2Q7LDG7 609 aa12.17□□□□□ -0.46
SMURF1-204ENST00000480055 OR6J1Q8NGC5 347 aa12.17□□□□□ -0.46
SMURF1-204ENST00000480055 DCAF4Q8WV16 495 aa12.17□□□□□ -0.46
SMURF1-204ENST00000480055 ARNTL2Q8WYA1 636 aa12.17□□□□□ -0.46
SMURF1-204ENST00000480055 HLA-CQ95604 372 aa12.17□□□□□ -0.46
SMURF1-204ENST00000480055 MPHOSPH6Q99547 160 aaKnown RBP12.17□□□□□ -0.46
SMURF1-204ENST00000480055 ZBED2Q9BTP6 218 aa12.17□□□□□ -0.46
SMURF1-204ENST00000480055 GPCPD1Q9NPB8 672 aa12.17□□□□□ -0.46
SMURF1-204ENST00000480055 FRMPD2Q68DX3 1309 aaPredicted RBP12.16□□□□□ -0.46
SMURF1-204ENST00000480055 LPXNO60711 386 aa12.16□□□□□ -0.46
SMURF1-204ENST00000480055 ALDH5A1P51649 535 aaPredicted RBP12.16□□□□□ -0.46
SMURF1-204ENST00000480055 PDE4DQ08499 809 aa12.16□□□□□ -0.46
SMURF1-204ENST00000480055 GRB10Q13322 594 aa12.16□□□□□ -0.46
SMURF1-204ENST00000480055 SYDE2Q5VT97 1194 aa12.16□□□□□ -0.46
SMURF1-204ENST00000480055 TTBK2Q6IQ55 1244 aa12.16□□□□□ -0.46
SMURF1-204ENST00000480055 HERC6Q8IVU3 1022 aa12.16□□□□□ -0.46
SMURF1-204ENST00000480055 RETREG2Q8NC44 543 aa12.16□□□□□ -0.46
SMURF1-204ENST00000480055 PI4K2BQ8TCG2 481 aa12.16□□□□□ -0.46
SMURF1-204ENST00000480055 OTUD7AQ8TE49 926 aaPredicted RBP12.16□□□□□ -0.46
SMURF1-204ENST00000480055 MTG1Q9BT17 334 aaPredicted RBP12.16□□□□□ -0.46
SMURF1-204ENST00000480055 KRTAP3-3Q9BYR6 98 aa12.16□□□□□ -0.46
SMURF1-204ENST00000480055 KRTAP3-2Q9BYR7 98 aa12.16□□□□□ -0.46
SMURF1-204ENST00000480055 FTOQ9C0B1 505 aaKnown RBP eCLIP12.16□□□□□ -0.46
SMURF1-204ENST00000480055 RAD50Q92878 1312 aa12.15□□□□□ -0.46
SMURF1-204ENST00000480055 ZNF318Q5VUA4 2279 aa12.15□□□□□ -0.46
SMURF1-204ENST00000480055 LOC102724159A0A0B4J2E5 919 aa12.15□□□□□ -0.46
SMURF1-204ENST00000480055 RBM47A0AV96 593 aaKnown RBP12.15□□□□□ -0.46
SMURF1-204ENST00000480055 NFIBO00712 420 aa12.15□□□□□ -0.46
SMURF1-204ENST00000480055 BAIAP3O94812 1187 aa12.15□□□□□ -0.46
SMURF1-204ENST00000480055 MX1P20591 662 aa12.15□□□□□ -0.46
SMURF1-204ENST00000480055 PWP2Q15269 919 aaKnown RBP12.15□□□□□ -0.46
SMURF1-204ENST00000480055 PROX2Q3B8N5 592 aa12.15□□□□□ -0.46
SMURF1-204ENST00000480055 RANBP17Q9H2T7 1088 aaKnown RBP12.15□□□□□ -0.46
SMURF1-204ENST00000480055 NOD1Q9Y239 953 aa12.15□□□□□ -0.46
SMURF1-204ENST00000480055 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.15□□□□□ -0.46
SMURF1-204ENST00000480055 KIF28PB7ZC32 967 aa12.14□□□□□ -0.47
SMURF1-204ENST00000480055 TK2O00142 265 aa12.14□□□□□ -0.47
SMURF1-204ENST00000480055 IQCF3P0C7M6 154 aa12.14□□□□□ -0.47
SMURF1-204ENST00000480055 TOP1P11387 765 aaKnown RBP12.14□□□□□ -0.47
SMURF1-204ENST00000480055 PPP2R5BQ15173 497 aa12.14□□□□□ -0.47
SMURF1-204ENST00000480055 NBPF20Q3BBV1 942 aa12.14□□□□□ -0.47
SMURF1-204ENST00000480055 NFRKBQ6P4R8 1299 aa12.14□□□□□ -0.47
SMURF1-204ENST00000480055 RNF207Q6ZRF8 634 aa12.14□□□□□ -0.47
SMURF1-204ENST00000480055 SPRED2Q7Z698 418 aa12.14□□□□□ -0.47
SMURF1-204ENST00000480055 PACS2Q86VP3 889 aa12.14□□□□□ -0.47
SMURF1-204ENST00000480055 PPP1R13LQ8WUF5 828 aa12.14□□□□□ -0.47
SMURF1-204ENST00000480055 TMEM47Q9BQJ4 181 aa12.14□□□□□ -0.47
SMURF1-204ENST00000480055 SLC4A5Q9BY07 1137 aa12.14□□□□□ -0.47
SMURF1-204ENST00000480055 FAM86C2PA6NEL3 165 aa12.13□□□□□ -0.47
SMURF1-204ENST00000480055 TRIM6-TRIM34B2RNG4 842 aa12.13□□□□□ -0.47
SMURF1-204ENST00000480055 B4DLN1 442 aa12.13□□□□□ -0.47
SMURF1-204ENST00000480055 PI4K2BG5E9Z4 385 aa12.13□□□□□ -0.47
SMURF1-204ENST00000480055 KPNA6O60684 536 aa12.13□□□□□ -0.47
SMURF1-204ENST00000480055 MRPL12P52815 198 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms