RNA–Protein interactions for RNA: ENST00000479625.1

GPNMB-211, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 788 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-211ENST00000479625 STAG1Q8WVM7 1258 aa11.53□□□□□ -0.56
GPNMB-211ENST00000479625 ZBED2Q9BTP6 218 aa11.53□□□□□ -0.56
GPNMB-211ENST00000479625 LMCD1Q9NZU5 365 aa11.53□□□□□ -0.56
GPNMB-211ENST00000479625 CCPG1Q9ULG6 757 aa11.53□□□□□ -0.56
GPNMB-211ENST00000479625 PRR12Q9ULL5 1215 aa11.53□□□□□ -0.56
GPNMB-211ENST00000479625 MTMR7Q9Y216 660 aa11.53□□□□□ -0.56
GPNMB-211ENST00000479625 NOD1Q9Y239 953 aa11.53□□□□□ -0.56
GPNMB-211ENST00000479625 LINC01553A4QN01 128 aa11.52□□□□□ -0.57
GPNMB-211ENST00000479625 M0R2C6 588 aa11.52□□□□□ -0.57
GPNMB-211ENST00000479625 NFIBO00712 420 aa11.52□□□□□ -0.57
GPNMB-211ENST00000479625 ARHGAP33O14559 1287 aa11.52□□□□□ -0.57
GPNMB-211ENST00000479625 TSPY3P0CV98 308 aa11.52□□□□□ -0.57
GPNMB-211ENST00000479625 TSPY8P0CW00 308 aa11.52□□□□□ -0.57
GPNMB-211ENST00000479625 SLC1A4P43007 532 aa11.52□□□□□ -0.57
GPNMB-211ENST00000479625 PSEN2P49810 448 aa11.52□□□□□ -0.57
GPNMB-211ENST00000479625 BFSP2Q13515 415 aa11.52□□□□□ -0.57
GPNMB-211ENST00000479625 BAATQ14032 418 aaPredicted RBP11.52□□□□□ -0.57
GPNMB-211ENST00000479625 ZSCAN25Q6NSZ9 544 aa11.52□□□□□ -0.57
GPNMB-211ENST00000479625 NFRKBQ6P4R8 1299 aa11.52□□□□□ -0.57
GPNMB-211ENST00000479625 SLC30A10Q6XR72 485 aa11.52□□□□□ -0.57
GPNMB-211ENST00000479625 ZNF454Q8N9F8 522 aa11.52□□□□□ -0.57
GPNMB-211ENST00000479625 CHURC1Q8WUH1 139 aa11.52□□□□□ -0.57
GPNMB-211ENST00000479625 OSBP2Q969R2 916 aa11.52□□□□□ -0.57
GPNMB-211ENST00000479625 GMCL1Q96IK5 515 aa11.52□□□□□ -0.57
GPNMB-211ENST00000479625 CTAGE1Q96RT6 745 aa11.52□□□□□ -0.57
GPNMB-211ENST00000479625 PHOX2BQ99453 314 aa11.52□□□□□ -0.57
GPNMB-211ENST00000479625 C17orf80Q9BSJ5 609 aa11.52□□□□□ -0.57
GPNMB-211ENST00000479625 SYNPO2Q9UMS6 1093 aa11.52□□□□□ -0.57
GPNMB-211ENST00000479625 MYH6P13533 1939 aa11.52□□□□□ -0.57
GPNMB-211ENST00000479625 MYO15AQ9UKN7 3530 aa11.52□□□□□ -0.57
GPNMB-211ENST00000479625 RBM47A0AV96 593 aaKnown RBP11.51□□□□□ -0.57
GPNMB-211ENST00000479625 GRXCR2A6NFK2 248 aa11.51□□□□□ -0.57
GPNMB-211ENST00000479625 H3BQ06 376 aaPredicted RBP11.51□□□□□ -0.57
GPNMB-211ENST00000479625 GPAA1O43292 621 aa11.51□□□□□ -0.57
GPNMB-211ENST00000479625 GJB5O95377 273 aa11.51□□□□□ -0.57
GPNMB-211ENST00000479625 ALADP13716 330 aa11.51□□□□□ -0.57
GPNMB-211ENST00000479625 ERVK-21P61565 698 aa11.51□□□□□ -0.57
GPNMB-211ENST00000479625 PPP2R5BQ15173 497 aa11.51□□□□□ -0.57
GPNMB-211ENST00000479625 GDF6Q6KF10 455 aaPredicted RBP11.51□□□□□ -0.57
GPNMB-211ENST00000479625 GIMAP6Q6P9H5 292 aa11.51□□□□□ -0.57
GPNMB-211ENST00000479625 LRRC8DQ7L1W4 858 aa11.51□□□□□ -0.57
GPNMB-211ENST00000479625 NEDD1Q8NHV4 660 aa11.51□□□□□ -0.57
GPNMB-211ENST00000479625 DHX38Q92620 1227 aaKnown RBP11.51□□□□□ -0.57
GPNMB-211ENST00000479625 TGS1Q96RS0 853 aaKnown RBP11.51□□□□□ -0.57
GPNMB-211ENST00000479625 KIAA1671Q9BY89 1806 aa11.51□□□□□ -0.57
GPNMB-211ENST00000479625 PTPDC1A2A3K4 754 aa11.5□□□□□ -0.57
GPNMB-211ENST00000479625 DCXO43602 365 aa11.5□□□□□ -0.57
GPNMB-211ENST00000479625 SMARCA5O60264 1052 aaPredicted RBP11.5□□□□□ -0.57
GPNMB-211ENST00000479625 NMT2O60551 498 aa11.5□□□□□ -0.57
GPNMB-211ENST00000479625 NBNO60934 754 aa11.5□□□□□ -0.57
GPNMB-211ENST00000479625 ARIH2O95376 493 aa11.5□□□□□ -0.57
GPNMB-211ENST00000479625 CALML3P27482 149 aa11.5□□□□□ -0.57
GPNMB-211ENST00000479625 TFAP4Q01664 338 aa11.5□□□□□ -0.57
GPNMB-211ENST00000479625 PTGISQ16647 500 aa11.5□□□□□ -0.57
GPNMB-211ENST00000479625 LRRFIP1Q32MZ4 808 aaKnown RBP11.5□□□□□ -0.57
GPNMB-211ENST00000479625 CNKSR3Q6P9H4 555 aa11.5□□□□□ -0.57
GPNMB-211ENST00000479625 AFAP1L1Q8TED9 768 aa11.5□□□□□ -0.57
GPNMB-211ENST00000479625 APPBP2Q92624 585 aa11.5□□□□□ -0.57
GPNMB-211ENST00000479625 KCNK17Q96T54 332 aa11.5□□□□□ -0.57
GPNMB-211ENST00000479625 ADD3Q9UEY8 706 aaKnown RBP11.5□□□□□ -0.57
GPNMB-211ENST00000479625 A6NJR5 290 aa11.49□□□□□ -0.57
GPNMB-211ENST00000479625 APPP05067 770 aa11.49□□□□□ -0.57
GPNMB-211ENST00000479625 ICAM1P05362 532 aa11.49□□□□□ -0.57
GPNMB-211ENST00000479625 SLC16A2P36021 539 aa11.49□□□□□ -0.57
GPNMB-211ENST00000479625 ZP2Q05996 745 aa11.49□□□□□ -0.57
GPNMB-211ENST00000479625 PTPN11Q06124 597 aaPredicted RBP11.49□□□□□ -0.57
GPNMB-211ENST00000479625 CCDC96Q2M329 555 aa11.49□□□□□ -0.57
GPNMB-211ENST00000479625 DMRTA1Q5VZB9 504 aa11.49□□□□□ -0.57
GPNMB-211ENST00000479625 TSHZ3Q63HK5 1081 aa11.49□□□□□ -0.57
GPNMB-211ENST00000479625 HFE2Q6ZVN8 426 aa11.49□□□□□ -0.57
GPNMB-211ENST00000479625 CCDC155Q8N6L0 562 aa11.49□□□□□ -0.57
GPNMB-211ENST00000479625 CAGE1Q8TC20 777 aa11.49□□□□□ -0.57
GPNMB-211ENST00000479625 NEK9Q8TD19 979 aa11.49□□□□□ -0.57
GPNMB-211ENST00000479625 SEC62Q99442 399 aaKnown RBP11.49□□□□□ -0.57
GPNMB-211ENST00000479625 RAD9AQ99638 391 aa11.49□□□□□ -0.57
GPNMB-211ENST00000479625 RANBP17Q9H2T7 1088 aaKnown RBP11.49□□□□□ -0.57
GPNMB-211ENST00000479625 ZNF287Q9HBT7 754 aa11.49□□□□□ -0.57
GPNMB-211ENST00000479625 STX8Q9UNK0 236 aa11.49□□□□□ -0.57
GPNMB-211ENST00000479625 RAD50Q92878 1312 aa11.49□□□□□ -0.57
GPNMB-211ENST00000479625 COL4A6Q14031 1691 aa11.49□□□□□ -0.57
GPNMB-211ENST00000479625 PLA2G6O60733 806 aa11.48□□□□□ -0.57
GPNMB-211ENST00000479625 RAB11FIP3O75154 756 aa11.48□□□□□ -0.57
GPNMB-211ENST00000479625 CXCL10P02778 98 aa11.48□□□□□ -0.57
GPNMB-211ENST00000479625 SELPP16109 830 aa11.48□□□□□ -0.57
GPNMB-211ENST00000479625 PDE4DQ08499 809 aa11.48□□□□□ -0.57
GPNMB-211ENST00000479625 MBTPS1Q14703 1052 aa11.48□□□□□ -0.57
GPNMB-211ENST00000479625 BRDTQ58F21 947 aaPredicted RBP11.48□□□□□ -0.57
GPNMB-211ENST00000479625 TTBK2Q6IQ55 1244 aa11.48□□□□□ -0.57
GPNMB-211ENST00000479625 RCSD1Q6JBY9 416 aa11.48□□□□□ -0.57
GPNMB-211ENST00000479625 ADGRD1Q6QNK2 874 aa11.48□□□□□ -0.57
GPNMB-211ENST00000479625 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.48□□□□□ -0.57
GPNMB-211ENST00000479625 EP400NLQ6ZTU2 488 aa11.48□□□□□ -0.57
GPNMB-211ENST00000479625 IFNL3Q8IZI9 196 aa11.48□□□□□ -0.57
GPNMB-211ENST00000479625 KBTBD3Q8NAB2 608 aa11.48□□□□□ -0.57
GPNMB-211ENST00000479625 WNT8BQ93098 351 aa11.48□□□□□ -0.57
GPNMB-211ENST00000479625 CRBNQ96SW2 442 aa11.48□□□□□ -0.57
GPNMB-211ENST00000479625 INCENPQ9NQS7 918 aa11.48□□□□□ -0.57
GPNMB-211ENST00000479625 IL17RBQ9NRM6 502 aa11.48□□□□□ -0.57
GPNMB-211ENST00000479625 DOCK5Q9H7D0 1870 aa11.48□□□□□ -0.57
GPNMB-211ENST00000479625 FRMPD2Q68DX3 1309 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms