RNA–Protein interactions for RNA: ENST00000479596.5

CCNL1-222, Transcript of cyclin L1, humanhuman

TSL 3

Gene CCNL1, Length 883 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-222ENST00000479596 HIPK3Q9H422 1215 aa17.4■□□□□ 0.38
CCNL1-222ENST00000479596 TRMT13Q9NUP7 481 aaKnown RBP17.4■□□□□ 0.38
CCNL1-222ENST00000479596 FRMPD4Q14CM0 1322 aa17.4■□□□□ 0.38
CCNL1-222ENST00000479596 MMP3P08254 477 aa17.39■□□□□ 0.37
CCNL1-222ENST00000479596 EXOSC10Q01780 885 aaKnown RBP17.39■□□□□ 0.37
CCNL1-222ENST00000479596 TRAF1Q13077 416 aa17.39■□□□□ 0.37
CCNL1-222ENST00000479596 NBPF20Q3BBV1 942 aa17.39■□□□□ 0.37
CCNL1-222ENST00000479596 TSGA10IPQ3SY00 556 aa17.39■□□□□ 0.37
CCNL1-222ENST00000479596 BRDTQ58F21 947 aaPredicted RBP17.39■□□□□ 0.37
CCNL1-222ENST00000479596 EMID1Q96A84 441 aaPredicted RBP17.39■□□□□ 0.37
CCNL1-222ENST00000479596 LZTS2Q9BRK4 669 aa17.39■□□□□ 0.37
CCNL1-222ENST00000479596 WNT8AQ9H1J5 351 aa17.39■□□□□ 0.37
CCNL1-222ENST00000479596 KPNA6O60684 536 aa17.38■□□□□ 0.37
CCNL1-222ENST00000479596 MYCLP12524 364 aaPredicted RBP17.38■□□□□ 0.37
CCNL1-222ENST00000479596 SMAD3P84022 425 aaKnown RBP17.38■□□□□ 0.37
CCNL1-222ENST00000479596 PPIGQ13427 754 aaKnown RBP eCLIP17.38■□□□□ 0.374e-10■□□□□ 10.1
CCNL1-222ENST00000479596 TMEM240Q5SV17 173 aa17.38■□□□□ 0.37
CCNL1-222ENST00000479596 RASIP1Q5U651 963 aa17.38■□□□□ 0.37
CCNL1-222ENST00000479596 RNF20Q5VTR2 975 aa17.38■□□□□ 0.37
CCNL1-222ENST00000479596 NFRKBQ6P4R8 1299 aa17.38■□□□□ 0.37
CCNL1-222ENST00000479596 TMTC3Q6ZXV5 915 aa17.38■□□□□ 0.37
CCNL1-222ENST00000479596 FCHSD1Q86WN1 690 aa17.38■□□□□ 0.37
CCNL1-222ENST00000479596 TMEM199Q8N511 208 aa17.38■□□□□ 0.37
CCNL1-222ENST00000479596 KAT2BQ92831 832 aa17.38■□□□□ 0.37
CCNL1-222ENST00000479596 GPKOWQ92917 476 aaPredicted RBP eCLIP17.38■□□□□ 0.378e-7■■□□□ 12.6
CCNL1-222ENST00000479596 VWCEQ96DN2 955 aa17.38■□□□□ 0.37
CCNL1-222ENST00000479596 RRP36Q96EU6 259 aaKnown RBP17.38■□□□□ 0.37
CCNL1-222ENST00000479596 ZFP91Q96JP5 570 aaPredicted RBP17.38■□□□□ 0.37
CCNL1-222ENST00000479596 TCEANC2Q96MN5 208 aa17.38■□□□□ 0.37
CCNL1-222ENST00000479596 GUCD1Q96NT3 240 aa17.38■□□□□ 0.37
CCNL1-222ENST00000479596 NEK1Q96PY6 1258 aa17.38■□□□□ 0.37
CCNL1-222ENST00000479596 SLC12A7Q9Y666 1083 aa17.38■□□□□ 0.37
CCNL1-222ENST00000479596 MRVI1Q9Y6F6 885 aa17.38■□□□□ 0.37
CCNL1-222ENST00000479596 CALM1P0DP23 149 aa17.37■□□□□ 0.37
CCNL1-222ENST00000479596 CALM2P0DP24 149 aa17.37■□□□□ 0.37
CCNL1-222ENST00000479596 CALM3P0DP25 149 aa17.37■□□□□ 0.37
CCNL1-222ENST00000479596 ACRP10323 421 aa17.37■□□□□ 0.37
CCNL1-222ENST00000479596 CYP2C9P11712 490 aa17.37■□□□□ 0.37
CCNL1-222ENST00000479596 GNAQP50148 359 aa17.37■□□□□ 0.37
CCNL1-222ENST00000479596 CHD9Q3L8U1 2897 aa17.37■□□□□ 0.37
CCNL1-222ENST00000479596 MEIS2O14770 477 aa17.36■□□□□ 0.37
CCNL1-222ENST00000479596 CCND2P30279 289 aa17.36■□□□□ 0.37
CCNL1-222ENST00000479596 CCL23P55773 120 aa17.36■□□□□ 0.37
CCNL1-222ENST00000479596 MRPS9P82933 396 aaKnown RBP17.36■□□□□ 0.37
CCNL1-222ENST00000479596 SP2Q02086 613 aa17.36■□□□□ 0.37
CCNL1-222ENST00000479596 APOA5Q6Q788 366 aa17.36■□□□□ 0.37
CCNL1-222ENST00000479596 USP17L6PQ6QN14 398 aa17.36■□□□□ 0.37
CCNL1-222ENST00000479596 DHX32Q7L7V1 743 aaKnown RBP17.36■□□□□ 0.37
CCNL1-222ENST00000479596 MICU3Q86XE3 530 aa17.36■□□□□ 0.37
CCNL1-222ENST00000479596 FANCBQ8NB91 859 aa17.36■□□□□ 0.37
CCNL1-222ENST00000479596 KCNB2Q92953 911 aa17.36■□□□□ 0.37
CCNL1-222ENST00000479596 CTAGE1Q96RT6 745 aa17.36■□□□□ 0.37
CCNL1-222ENST00000479596 IL23AQ9NPF7 189 aa17.36■□□□□ 0.37
CCNL1-222ENST00000479596 BRPF3Q9ULD4 1205 aa17.36■□□□□ 0.37
CCNL1-222ENST00000479596 hCG_1642624A0A1W2PR95 340 aa17.35■□□□□ 0.37
CCNL1-222ENST00000479596 PIK3CDO00329 1044 aa17.35■□□□□ 0.37
CCNL1-222ENST00000479596 HOXD8P13378 290 aaPredicted RBP17.35■□□□□ 0.37
CCNL1-222ENST00000479596 UBA1P22314 1058 aaKnown RBP17.35■□□□□ 0.37
CCNL1-222ENST00000479596 PTPN11Q06124 597 aaPredicted RBP17.35■□□□□ 0.37
CCNL1-222ENST00000479596 LAMC2Q13753 1193 aa17.35■□□□□ 0.37
CCNL1-222ENST00000479596 FAM47CQ5HY64 1035 aa17.35■□□□□ 0.37
CCNL1-222ENST00000479596 MYSM1Q5VVJ2 828 aa17.35■□□□□ 0.37
CCNL1-222ENST00000479596 PSRC1Q6PGN9 363 aaPredicted RBP17.35■□□□□ 0.37
CCNL1-222ENST00000479596 ZNF365Q70YC5 407 aa17.35■□□□□ 0.37
CCNL1-222ENST00000479596 PPTC7Q8NI37 304 aa17.35■□□□□ 0.37
CCNL1-222ENST00000479596 FAM161BQ96MY7 647 aa17.35■□□□□ 0.37
CCNL1-222ENST00000479596 TTYH1Q9H313 450 aaPredicted RBP17.35■□□□□ 0.37
CCNL1-222ENST00000479596 SEC63Q9UGP8 760 aaKnown RBP17.35■□□□□ 0.37
CCNL1-222ENST00000479596 EYSQ5T1H1 3165 aa17.35■□□□□ 0.37
CCNL1-222ENST00000479596 SORBS3O60504 671 aa17.34■□□□□ 0.37
CCNL1-222ENST00000479596 SUPT20HL2P0C7V6 817 aa17.34■□□□□ 0.37
CCNL1-222ENST00000479596 FUT2Q10981 343 aa17.34■□□□□ 0.37
CCNL1-222ENST00000479596 SEMA3FQ13275 785 aa17.34■□□□□ 0.37
CCNL1-222ENST00000479596 CELF3Q5SZQ8 465 aaKnown RBP17.34■□□□□ 0.37
CCNL1-222ENST00000479596 ZNF697Q5TEC3 545 aa17.34■□□□□ 0.37
CCNL1-222ENST00000479596 DHX37Q8IY37 1157 aaKnown RBP17.34■□□□□ 0.37
CCNL1-222ENST00000479596 CCDC82Q8N4S0 544 aa17.34■□□□□ 0.37
CCNL1-222ENST00000479596 CNTNAP5Q8WYK1 1306 aa17.34■□□□□ 0.37
CCNL1-222ENST00000479596 SCLYQ96I15 445 aa17.34■□□□□ 0.37
CCNL1-222ENST00000479596 INPP4AQ96PE3 977 aaPredicted RBP17.34■□□□□ 0.37
CCNL1-222ENST00000479596 BCAS3Q9H6U6 928 aa17.34■□□□□ 0.37
CCNL1-222ENST00000479596 STXBP5LQ9Y2K9 1186 aa17.34■□□□□ 0.37
CCNL1-222ENST00000479596 GGPS1O95749 300 aa17.33■□□□□ 0.36
CCNL1-222ENST00000479596 F2P00734 622 aa17.33■□□□□ 0.36
CCNL1-222ENST00000479596 ZNF286BP0CG31 522 aa17.33■□□□□ 0.36
CCNL1-222ENST00000479596 CPA1P15085 419 aa17.33■□□□□ 0.36
CCNL1-222ENST00000479596 CASTP20810 708 aaKnown RBP17.33■□□□□ 0.36
CCNL1-222ENST00000479596 HSPA4P34932 840 aa17.33■□□□□ 0.36
CCNL1-222ENST00000479596 KRT32Q14532 448 aa17.33■□□□□ 0.36
CCNL1-222ENST00000479596 DGKDQ16760 1214 aa17.33■□□□□ 0.36
CCNL1-222ENST00000479596 HSDL1Q3SXM5 330 aa17.33■□□□□ 0.36
CCNL1-222ENST00000479596 KCNV1Q6PIU1 500 aa17.33■□□□□ 0.36
CCNL1-222ENST00000479596 SESTD1Q86VW0 696 aa17.33■□□□□ 0.36
CCNL1-222ENST00000479596 HERVK_113Q902F9 699 aa17.33■□□□□ 0.36
CCNL1-222ENST00000479596 SEMA6BQ9H3T3 888 aa17.33■□□□□ 0.36
CCNL1-222ENST00000479596 CXXC1Q9P0U4 656 aaPredicted RBP17.33■□□□□ 0.36
CCNL1-222ENST00000479596 HAS3O00219 553 aa17.32■□□□□ 0.36
CCNL1-222ENST00000479596 TGFB3P10600 412 aa17.32■□□□□ 0.36
CCNL1-222ENST00000479596 ICAM3P32942 547 aa17.32■□□□□ 0.36
CCNL1-222ENST00000479596 CHMP4BP1P59074 171 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms