RNA–Protein interactions for RNA: ENST00000479361.1

PERM1-203, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

TSL 1 (best)

Gene PERM1, Length 1,208 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-203ENST00000479361 PDGFCQ9NRA1 345 aa28.62■■■□□ 2.17
PERM1-203ENST00000479361 TRIM29Q14134 588 aa28.61■■■□□ 2.17
PERM1-203ENST00000479361 JAKMIP3Q5VZ66 844 aa28.61■■■□□ 2.17
PERM1-203ENST00000479361 ANKLE1Q8NAG6 615 aa28.61■■■□□ 2.17
PERM1-203ENST00000479361 DAGLBQ8NCG7 672 aa28.61■■■□□ 2.17
PERM1-203ENST00000479361 ANO3Q9BYT9 981 aa28.61■■■□□ 2.17
PERM1-203ENST00000479361 WDR11Q9BZH6 1224 aa28.61■■■□□ 2.17
PERM1-203ENST00000479361 TMEM260Q9NX78 707 aa28.61■■■□□ 2.17
PERM1-203ENST00000479361 TTLL4Q14679 1199 aa28.6■■■□□ 2.17
PERM1-203ENST00000479361 GNPTABQ3T906 1256 aa28.6■■■□□ 2.17
PERM1-203ENST00000479361 SEPT14Q6ZU15 432 aa28.6■■■□□ 2.17
PERM1-203ENST00000479361 BLIDQ8IZY5 108 aa28.6■■■□□ 2.17
PERM1-203ENST00000479361 ARRDC4Q8NCT1 418 aa28.6■■■□□ 2.17
PERM1-203ENST00000479361 PHF20Q9BVI0 1012 aa28.6■■■□□ 2.17
PERM1-203ENST00000479361 SPC25Q9HBM1 224 aa28.6■■■□□ 2.17
PERM1-203ENST00000479361 C11orf97A0A1B0GVM6 126 aaPredicted RBP28.59■■■□□ 2.17
PERM1-203ENST00000479361 DUSP28Q4G0W2 176 aa28.59■■■□□ 2.17
PERM1-203ENST00000479361 KCNV1Q6PIU1 500 aa28.59■■■□□ 2.17
PERM1-203ENST00000479361 FAM184AQ8NB25 1140 aa28.59■■■□□ 2.17
PERM1-203ENST00000479361 KCNJ14Q9UNX9 436 aa28.59■■■□□ 2.17
PERM1-203ENST00000479361 KIF3AQ9Y496 699 aa28.59■■■□□ 2.17
PERM1-203ENST00000479361 NKRFO15226 690 aaKnown RBP eCLIP28.58■■■□□ 2.177e-7■■■□□ 14.9
PERM1-203ENST00000479361 SMPD1P17405 629 aa28.58■■■□□ 2.17
PERM1-203ENST00000479361 SREBF1P36956 1147 aa28.58■■■□□ 2.17
PERM1-203ENST00000479361 MRPS9P82933 396 aaKnown RBP28.58■■■□□ 2.17
PERM1-203ENST00000479361 LENG1Q96BZ8 264 aaPredicted RBP28.58■■■□□ 2.17
PERM1-203ENST00000479361 PGBD1Q96JS3 809 aa28.58■■■□□ 2.17
PERM1-203ENST00000479361 Q9Y3F1 56 aa28.58■■■□□ 2.17
PERM1-203ENST00000479361 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.58■■■□□ 2.17
PERM1-203ENST00000479361 ADCY6O43306 1168 aa28.57■■■□□ 2.16
PERM1-203ENST00000479361 TXNP10599 105 aaKnown RBP28.57■■■□□ 2.16
PERM1-203ENST00000479361 RNF180Q86T96 592 aa28.57■■■□□ 2.16
PERM1-203ENST00000479361 INPP4AQ96PE3 977 aaPredicted RBP28.57■■■□□ 2.16
PERM1-203ENST00000479361 AP5M1Q9H0R1 490 aa28.57■■■□□ 2.16
PERM1-203ENST00000479361 BRMS1Q9HCU9 246 aa28.57■■■□□ 2.16
PERM1-203ENST00000479361 GNEQ9Y223 722 aaKnown RBP28.57■■■□□ 2.16
PERM1-203ENST00000479361 MRVI1Q9Y6F6 885 aa28.57■■■□□ 2.16
PERM1-203ENST00000479361 TGFB3P10600 412 aa28.56■■■□□ 2.16
PERM1-203ENST00000479361 TLK2Q86UE8 772 aa28.56■■■□□ 2.16
PERM1-203ENST00000479361 NLRX1Q86UT6 975 aa28.56■■■□□ 2.16
PERM1-203ENST00000479361 RASGRP4Q8TDF6 673 aa28.56■■■□□ 2.16
PERM1-203ENST00000479361 SNX21Q969T3 373 aa28.56■■■□□ 2.16
PERM1-203ENST00000479361 RTEL1Q9NZ71 1219 aa28.56■■■□□ 2.16
PERM1-203ENST00000479361 SYNRGQ9UMZ2 1314 aa28.56■■■□□ 2.16
PERM1-203ENST00000479361 DNM1LO00429 736 aa28.55■■■□□ 2.16
PERM1-203ENST00000479361 ADAMTS3O15072 1205 aa28.55■■■□□ 2.16
PERM1-203ENST00000479361 RGS20O76081 388 aa28.55■■■□□ 2.16
PERM1-203ENST00000479361 FARP2O94887 1054 aaPredicted RBP28.55■■■□□ 2.16
PERM1-203ENST00000479361 PGK1P00558 417 aa28.55■■■□□ 2.16
PERM1-203ENST00000479361 MYCNP04198 464 aaPredicted RBP28.55■■■□□ 2.16
PERM1-203ENST00000479361 NPY5RQ15761 445 aa28.55■■■□□ 2.16
PERM1-203ENST00000479361 CCDC62Q6P9F0 684 aa28.55■■■□□ 2.16
PERM1-203ENST00000479361 C8orf76Q96K31 380 aa28.55■■■□□ 2.16
PERM1-203ENST00000479361 UPF3AQ9H1J1 476 aaKnown RBP28.55■■■□□ 2.16
PERM1-203ENST00000479361 GJB4Q9NTQ9 266 aa28.55■■■□□ 2.16
PERM1-203ENST00000479361 KBTBD13C9JR72 458 aa28.54■■■□□ 2.16
PERM1-203ENST00000479361 GJA9P57773 515 aa28.54■■■□□ 2.16
PERM1-203ENST00000479361 ARHGAP4P98171 946 aa28.54■■■□□ 2.16
PERM1-203ENST00000479361 LRRC41Q15345 812 aa28.54■■■□□ 2.16
PERM1-203ENST00000479361 ZFP91Q96JP5 570 aaPredicted RBP28.54■■■□□ 2.16
PERM1-203ENST00000479361 CDHR1Q96JP9 859 aa28.54■■■□□ 2.16
PERM1-203ENST00000479361 FRMPD3Q5JV73 1810 aa28.54■■■□□ 2.16
PERM1-203ENST00000479361 K7ELQ4 463 aaPredicted RBP28.53■■■□□ 2.16
PERM1-203ENST00000479361 M0R2N6 131 aa28.53■■■□□ 2.16
PERM1-203ENST00000479361 FIBPO43427 364 aa28.53■■■□□ 2.16
PERM1-203ENST00000479361 ADAMTS4O75173 837 aa28.53■■■□□ 2.16
PERM1-203ENST00000479361 C6orf222P0C671 652 aaPredicted RBP28.53■■■□□ 2.16
PERM1-203ENST00000479361 ICAM3P32942 547 aa28.53■■■□□ 2.16
PERM1-203ENST00000479361 KRT2P35908 639 aa28.53■■■□□ 2.16
PERM1-203ENST00000479361 KRT25Q7Z3Z0 450 aa28.53■■■□□ 2.16
PERM1-203ENST00000479361 GPRASP2Q96D09 838 aa28.53■■■□□ 2.16
PERM1-203ENST00000479361 DDX41Q9UJV9 622 aaKnown RBP28.53■■■□□ 2.16
PERM1-203ENST00000479361 KIAA1217Q5T5P2 1943 aa28.52■■■□□ 2.16
PERM1-203ENST00000479361 DYNC1LI2O43237 492 aaPredicted RBP28.52■■■□□ 2.16
PERM1-203ENST00000479361 ARIH2O95376 493 aa28.52■■■□□ 2.16
PERM1-203ENST00000479361 MMP1P03956 469 aa28.52■■■□□ 2.16
PERM1-203ENST00000479361 ZNF76P36508 570 aa28.52■■■□□ 2.16
PERM1-203ENST00000479361 FOSBP53539 338 aa28.52■■■□□ 2.16
PERM1-203ENST00000479361 NKX3-2P78367 333 aa28.52■■■□□ 2.16
PERM1-203ENST00000479361 CUL4AQ13619 759 aa28.52■■■□□ 2.16
PERM1-203ENST00000479361 SAFBQ15424 915 aaKnown RBP eCLIP28.52■■■□□ 2.16
PERM1-203ENST00000479361 LY6KQ17RY6 165 aa28.52■■■□□ 2.16
PERM1-203ENST00000479361 GJC2Q5T442 439 aaPredicted RBP28.52■■■□□ 2.16
PERM1-203ENST00000479361 KRT40Q6A162 431 aa28.52■■■□□ 2.16
PERM1-203ENST00000479361 SMC3Q9UQE7 1217 aa28.52■■■□□ 2.16
PERM1-203ENST00000479361 UBIAD1Q9Y5Z9 338 aa28.52■■■□□ 2.16
PERM1-203ENST00000479361 SPATA31C2B4DYI2 1134 aa28.51■■■□□ 2.15
PERM1-203ENST00000479361 MAFGO15525 162 aa28.51■■■□□ 2.15
PERM1-203ENST00000479361 GH1P01241 217 aa28.51■■■□□ 2.15
PERM1-203ENST00000479361 CYP3A4P08684 503 aa28.51■■■□□ 2.15
PERM1-203ENST00000479361 CST5P28325 142 aaPredicted RBP28.51■■■□□ 2.15
PERM1-203ENST00000479361 TMEM63BQ5T3F8 832 aa28.51■■■□□ 2.15
PERM1-203ENST00000479361 NECAB2Q7Z6G3 386 aa28.51■■■□□ 2.15
PERM1-203ENST00000479361 HSCBQ8IWL3 235 aa28.51■■■□□ 2.15
PERM1-203ENST00000479361 OR6J1Q8NGC5 347 aa28.51■■■□□ 2.15
PERM1-203ENST00000479361 CRYGNQ8WXF5 182 aa28.51■■■□□ 2.15
PERM1-203ENST00000479361 JADE2Q9NQC1 790 aa28.51■■■□□ 2.15
PERM1-203ENST00000479361 CCDC194A0A1B0GVG4 234 aa28.5■■■□□ 2.15
PERM1-203ENST00000479361 ITGB5P18084 799 aa28.5■■■□□ 2.15
PERM1-203ENST00000479361 MTMR1Q13613 665 aa28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms