RNA–Protein interactions for RNA: ENST00000479092.5

PTPN7-211, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 5

Gene PTPN7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-211	ENST00000479092	LENG1	Q96BZ8	264 aa	Predicted RBP	13.59	□□□□□ -0.23
PTPN7-211	ENST00000479092	PGBD1	Q96JS3	809 aa		13.59	□□□□□ -0.23
PTPN7-211	ENST00000479092	WDR11	Q9BZH6	1224 aa		13.59	□□□□□ -0.23
PTPN7-211	ENST00000479092	CRISPLD2	Q9H0B8	497 aa		13.59	□□□□□ -0.23
PTPN7-211	ENST00000479092	TMEM260	Q9NX78	707 aa		13.59	□□□□□ -0.23
PTPN7-211	ENST00000479092	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	13.59	□□□□□ -0.23
PTPN7-211	ENST00000479092	MRVI1	Q9Y6F6	885 aa		13.59	□□□□□ -0.23
PTPN7-211	ENST00000479092	DUSP11	O75319	330 aa	Known RBP	13.58	□□□□□ -0.24
PTPN7-211	ENST00000479092	FDPS	P14324	419 aa	Known RBP	13.58	□□□□□ -0.24
PTPN7-211	ENST00000479092	CLK2	P49760	499 aa	Known RBP	13.58	□□□□□ -0.24
PTPN7-211	ENST00000479092	FOSB	P53539	338 aa		13.58	□□□□□ -0.24
PTPN7-211	ENST00000479092	LHX8	Q68G74	356 aa		13.58	□□□□□ -0.24
PTPN7-211	ENST00000479092	IQSEC1	Q6DN90	963 aa		13.58	□□□□□ -0.24
PTPN7-211	ENST00000479092	TAPT1	Q6NXT6	567 aa		13.58	□□□□□ -0.24
PTPN7-211	ENST00000479092	RNF180	Q86T96	592 aa		13.58	□□□□□ -0.24
PTPN7-211	ENST00000479092	TLK2	Q86UE8	772 aa		13.58	□□□□□ -0.24
PTPN7-211	ENST00000479092	BLID	Q8IZY5	108 aa		13.58	□□□□□ -0.24
PTPN7-211	ENST00000479092	ANKLE1	Q8NAG6	615 aa		13.58	□□□□□ -0.24
PTPN7-211	ENST00000479092	DAGLB	Q8NCG7	672 aa		13.58	□□□□□ -0.24
PTPN7-211	ENST00000479092	RASGRP4	Q8TDF6	673 aa		13.58	□□□□□ -0.24
PTPN7-211	ENST00000479092	SHISA4	Q96DD7	197 aa		13.58	□□□□□ -0.24
PTPN7-211	ENST00000479092	C8orf76	Q96K31	380 aa		13.58	□□□□□ -0.24
PTPN7-211	ENST00000479092	PHF20	Q9BVI0	1012 aa		13.58	□□□□□ -0.24
PTPN7-211	ENST00000479092	PDGFC	Q9NRA1	345 aa		13.58	□□□□□ -0.24
PTPN7-211	ENST00000479092	OGDHL	Q9ULD0	1010 aa		13.58	□□□□□ -0.24
PTPN7-211	ENST00000479092	KCNJ14	Q9UNX9	436 aa		13.58	□□□□□ -0.24
PTPN7-211	ENST00000479092	SYNRG	Q9UMZ2	1314 aa		13.58	□□□□□ -0.24
PTPN7-211	ENST00000479092	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	13.57	□□□□□ -0.24
PTPN7-211	ENST00000479092	KBTBD13	C9JR72	458 aa		13.57	□□□□□ -0.24
PTPN7-211	ENST00000479092		K7ELQ4	463 aa	Predicted RBP	13.57	□□□□□ -0.24
PTPN7-211	ENST00000479092	NKRF	O15226	690 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
PTPN7-211	ENST00000479092	FARP2	O94887	1054 aa	Predicted RBP	13.57	□□□□□ -0.24
PTPN7-211	ENST00000479092	TXN	P10599	105 aa	Known RBP	13.57	□□□□□ -0.24
PTPN7-211	ENST00000479092	EN2	P19622	333 aa	Predicted RBP	13.57	□□□□□ -0.24
PTPN7-211	ENST00000479092	KRT2	P35908	639 aa		13.57	□□□□□ -0.24
PTPN7-211	ENST00000479092	SREBF1	P36956	1147 aa		13.57	□□□□□ -0.24
PTPN7-211	ENST00000479092	SAFB	Q15424	915 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
PTPN7-211	ENST00000479092	DUSP28	Q4G0W2	176 aa		13.57	□□□□□ -0.24
PTPN7-211	ENST00000479092	KCNV1	Q6PIU1	500 aa		13.57	□□□□□ -0.24
PTPN7-211	ENST00000479092	NLRX1	Q86UT6	975 aa		13.57	□□□□□ -0.24
PTPN7-211	ENST00000479092	ARRDC4	Q8NCT1	418 aa		13.57	□□□□□ -0.24
PTPN7-211	ENST00000479092	AP5M1	Q9H0R1	490 aa		13.57	□□□□□ -0.24
PTPN7-211	ENST00000479092	SMC3	Q9UQE7	1217 aa		13.57	□□□□□ -0.24
PTPN7-211	ENST00000479092	CCDC194	A0A1B0GVG4	234 aa		13.56	□□□□□ -0.24
PTPN7-211	ENST00000479092	RBM47	A0AV96	593 aa	Known RBP	13.56	□□□□□ -0.24
PTPN7-211	ENST00000479092	DNM1L	O00429	736 aa		13.56	□□□□□ -0.24
PTPN7-211	ENST00000479092	ADCY6	O43306	1168 aa		13.56	□□□□□ -0.24
PTPN7-211	ENST00000479092	FIBP	O43427	364 aa		13.56	□□□□□ -0.24
PTPN7-211	ENST00000479092	PGK1	P00558	417 aa		13.56	□□□□□ -0.24
PTPN7-211	ENST00000479092	C6orf222	P0C671	652 aa	Predicted RBP	13.56	□□□□□ -0.24
PTPN7-211	ENST00000479092	SMPD1	P17405	629 aa		13.56	□□□□□ -0.24
PTPN7-211	ENST00000479092	ZNF76	P36508	570 aa		13.56	□□□□□ -0.24
PTPN7-211	ENST00000479092	MRPS9	P82933	396 aa	Known RBP	13.56	□□□□□ -0.24
PTPN7-211	ENST00000479092	ARHGAP4	P98171	946 aa		13.56	□□□□□ -0.24
PTPN7-211	ENST00000479092	BRDT	Q58F21	947 aa	Predicted RBP	13.56	□□□□□ -0.24
PTPN7-211	ENST00000479092	KRT25	Q7Z3Z0	450 aa		13.56	□□□□□ -0.24
PTPN7-211	ENST00000479092	SNX21	Q969T3	373 aa		13.56	□□□□□ -0.24
PTPN7-211	ENST00000479092	CDHR1	Q96JP9	859 aa		13.56	□□□□□ -0.24
PTPN7-211	ENST00000479092	INPP4A	Q96PE3	977 aa	Predicted RBP	13.56	□□□□□ -0.24
PTPN7-211	ENST00000479092	GJB4	Q9NTQ9	266 aa		13.56	□□□□□ -0.24
PTPN7-211	ENST00000479092	RTEL1	Q9NZ71	1219 aa		13.56	□□□□□ -0.24
PTPN7-211	ENST00000479092	MCM3AP	O60318	1980 aa		13.55	□□□□□ -0.24
PTPN7-211	ENST00000479092	ADAMTS4	O75173	837 aa		13.55	□□□□□ -0.24
PTPN7-211	ENST00000479092	MMP1	P03956	469 aa		13.55	□□□□□ -0.24
PTPN7-211	ENST00000479092	GJB2	P29033	226 aa		13.55	□□□□□ -0.24
PTPN7-211	ENST00000479092	CPT1A	P50416	773 aa		13.55	□□□□□ -0.24
PTPN7-211	ENST00000479092	MTMR1	Q13613	665 aa		13.55	□□□□□ -0.24
PTPN7-211	ENST00000479092	GNL2	Q13823	731 aa	Known RBP	13.55	□□□□□ -0.24
PTPN7-211	ENST00000479092	NONO	Q15233	471 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
PTPN7-211	ENST00000479092	KRT40	Q6A162	431 aa		13.55	□□□□□ -0.24
PTPN7-211	ENST00000479092	DIS3L2	Q8IYB7	885 aa	Known RBP	13.55	□□□□□ -0.24
PTPN7-211	ENST00000479092	OR6J1	Q8NGC5	347 aa		13.55	□□□□□ -0.24
PTPN7-211	ENST00000479092	GPRASP2	Q96D09	838 aa		13.55	□□□□□ -0.24
PTPN7-211	ENST00000479092	ZFP91	Q96JP5	570 aa	Predicted RBP	13.55	□□□□□ -0.24
PTPN7-211	ENST00000479092	GNE	Q9Y223	722 aa	Known RBP	13.55	□□□□□ -0.24
PTPN7-211	ENST00000479092		Q9Y3F1	56 aa		13.55	□□□□□ -0.24
PTPN7-211	ENST00000479092	DYNC1LI2	O43237	492 aa	Predicted RBP	13.54	□□□□□ -0.24
PTPN7-211	ENST00000479092	ZEB2	O60315	1214 aa		13.54	□□□□□ -0.24
PTPN7-211	ENST00000479092	RGS20	O76081	388 aa		13.54	□□□□□ -0.24
PTPN7-211	ENST00000479092	ARIH2	O95376	493 aa		13.54	□□□□□ -0.24
PTPN7-211	ENST00000479092	GH1	P01241	217 aa		13.54	□□□□□ -0.24
PTPN7-211	ENST00000479092	HSP90AA1	P07900	732 aa	Known RBP	13.54	□□□□□ -0.24
PTPN7-211	ENST00000479092	TGFB3	P10600	412 aa		13.54	□□□□□ -0.24
PTPN7-211	ENST00000479092	UBA1	P22314	1058 aa	Known RBP	13.54	□□□□□ -0.24
PTPN7-211	ENST00000479092	GJA9	P57773	515 aa		13.54	□□□□□ -0.24
PTPN7-211	ENST00000479092	SET	Q01105	290 aa	Predicted RBP	13.54	□□□□□ -0.24
PTPN7-211	ENST00000479092	GUCY1B3	Q02153	619 aa		13.54	□□□□□ -0.24
PTPN7-211	ENST00000479092	CUL4A	Q13619	759 aa		13.54	□□□□□ -0.24
PTPN7-211	ENST00000479092	LRRC41	Q15345	812 aa		13.54	□□□□□ -0.24
PTPN7-211	ENST00000479092	NPY5R	Q15761	445 aa		13.54	□□□□□ -0.24
PTPN7-211	ENST00000479092	FSCN1	Q16658	493 aa	Known RBP	13.54	□□□□□ -0.24
PTPN7-211	ENST00000479092	LY6K	Q17RY6	165 aa		13.54	□□□□□ -0.24
PTPN7-211	ENST00000479092	CEP55	Q53EZ4	464 aa		13.54	□□□□□ -0.24
PTPN7-211	ENST00000479092	GJC2	Q5T442	439 aa	Predicted RBP	13.54	□□□□□ -0.24
PTPN7-211	ENST00000479092	CCDC62	Q6P9F0	684 aa		13.54	□□□□□ -0.24
PTPN7-211	ENST00000479092	NECAB2	Q7Z6G3	386 aa		13.54	□□□□□ -0.24
PTPN7-211	ENST00000479092	PCSK9	Q8NBP7	692 aa	Known RBP	13.54	□□□□□ -0.24
PTPN7-211	ENST00000479092	UPF3A	Q9H1J1	476 aa	Known RBP	13.54	□□□□□ -0.24
PTPN7-211	ENST00000479092	KIAA0100	Q14667	2235 aa	Known RBP	13.54	□□□□□ -0.24
PTPN7-211	ENST00000479092	FRMPD3	Q5JV73	1810 aa		13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms