RNA–Protein interactions for RNA: ENST00000478644.1

HOXB3-209, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 398 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-209ENST00000478644 BICC1Q9H694 974 aaKnown RBP7.78□□□□□ -1.16
HOXB3-209ENST00000478644 SUGCTQ9HAC7 445 aa7.78□□□□□ -1.16
HOXB3-209ENST00000478644 VEZTQ9HBM0 779 aa7.78□□□□□ -1.16
HOXB3-209ENST00000478644 IGSF5Q9NSI5 407 aa7.78□□□□□ -1.16
HOXB3-209ENST00000478644 NOB1Q9ULX3 412 aaKnown RBP7.78□□□□□ -1.16
HOXB3-209ENST00000478644 AKAP2Q9Y2D5 859 aa7.78□□□□□ -1.16
HOXB3-209ENST00000478644 HIF3AQ9Y2N7 669 aa7.78□□□□□ -1.16
HOXB3-209ENST00000478644 CSADQ9Y600 493 aa7.78□□□□□ -1.16
HOXB3-209ENST00000478644 COL4A1P02462 1669 aa7.78□□□□□ -1.16
HOXB3-209ENST00000478644 WTIPA6NIX2 430 aaPredicted RBP7.77□□□□□ -1.17
HOXB3-209ENST00000478644 EYA2O00167 538 aa7.77□□□□□ -1.17
HOXB3-209ENST00000478644 UBTFL1P0CB47 393 aaPredicted RBP7.77□□□□□ -1.17
HOXB3-209ENST00000478644 IL15P40933 162 aaPredicted RBP7.77□□□□□ -1.17
HOXB3-209ENST00000478644 CRKP46108 304 aa7.77□□□□□ -1.17
HOXB3-209ENST00000478644 NLRP12P59046 1061 aa7.77□□□□□ -1.17
HOXB3-209ENST00000478644 RASA3Q14644 834 aa7.77□□□□□ -1.17
HOXB3-209ENST00000478644 EPHA10Q5JZY3 1008 aa7.77□□□□□ -1.17
HOXB3-209ENST00000478644 SPTY2D1Q68D10 685 aaPredicted RBP7.77□□□□□ -1.17
HOXB3-209ENST00000478644 FAM20CQ8IXL6 584 aa7.77□□□□□ -1.17
HOXB3-209ENST00000478644 CERS5Q8N5B7 392 aa7.77□□□□□ -1.17
HOXB3-209ENST00000478644 SMG8Q8ND04 991 aaKnown RBP7.77□□□□□ -1.17
HOXB3-209ENST00000478644 ZNF296Q8WUU4 475 aaPredicted RBP7.77□□□□□ -1.17
HOXB3-209ENST00000478644 WNK4Q96J92 1243 aa7.77□□□□□ -1.17
HOXB3-209ENST00000478644 ZDHHC15Q96MV8 337 aa7.77□□□□□ -1.17
HOXB3-209ENST00000478644 FAM83CQ9BQN1 747 aa7.77□□□□□ -1.17
HOXB3-209ENST00000478644 RUSC1Q9BVN2 902 aa7.77□□□□□ -1.17
HOXB3-209ENST00000478644 MXD3Q9BW11 206 aa7.77□□□□□ -1.17
HOXB3-209ENST00000478644 NRSN2Q9GZP1 204 aa7.77□□□□□ -1.17
HOXB3-209ENST00000478644 ZNF70Q9UC06 446 aaPredicted RBP7.77□□□□□ -1.17
HOXB3-209ENST00000478644 DENND2AQ9ULE3 1009 aa7.77□□□□□ -1.17
HOXB3-209ENST00000478644 ECM29Q5VYK3 1845 aa7.77□□□□□ -1.17
HOXB3-209ENST00000478644 SPEF2Q9C093 1822 aa7.77□□□□□ -1.17
HOXB3-209ENST00000478644 PDS5AQ29RF7 1337 aaKnown RBP7.77□□□□□ -1.17
HOXB3-209ENST00000478644 A0A096LPE4 126 aa7.76□□□□□ -1.17
HOXB3-209ENST00000478644 LOC100289279A0A1B0GTE1 492 aa7.76□□□□□ -1.17
HOXB3-209ENST00000478644 A0A1W2PPZ6 126 aa7.76□□□□□ -1.17
HOXB3-209ENST00000478644 F8W031 263 aaPredicted RBP7.76□□□□□ -1.17
HOXB3-209ENST00000478644 USP2O75604 605 aaPredicted RBP7.76□□□□□ -1.17
HOXB3-209ENST00000478644 KLRK1P26718 216 aa7.76□□□□□ -1.17
HOXB3-209ENST00000478644 GYG1P46976 350 aa7.76□□□□□ -1.17
HOXB3-209ENST00000478644 PRMT2P55345 433 aa7.76□□□□□ -1.17
HOXB3-209ENST00000478644 KIF22Q14807 665 aa7.76□□□□□ -1.17
HOXB3-209ENST00000478644 DLK2Q6UY11 383 aa7.76□□□□□ -1.17
HOXB3-209ENST00000478644 NBPF11Q86T75 865 aa7.76□□□□□ -1.17
HOXB3-209ENST00000478644 VGLL2Q8N8G2 317 aa7.76□□□□□ -1.17
HOXB3-209ENST00000478644 ASAP3Q8TDY4 903 aa7.76□□□□□ -1.17
HOXB3-209ENST00000478644 KAZALD1Q96I82 304 aa7.76□□□□□ -1.17
HOXB3-209ENST00000478644 C7orf69Q9H7B7 122 aa7.76□□□□□ -1.17
HOXB3-209ENST00000478644 SALL1Q9NSC2 1324 aa7.76□□□□□ -1.17
HOXB3-209ENST00000478644 RPAP1Q9BWH6 1393 aaPredicted RBP7.75□□□□□ -1.17
HOXB3-209ENST00000478644 BCAR3O75815 825 aa7.75□□□□□ -1.17
HOXB3-209ENST00000478644 TIAF1O95411 115 aa7.75□□□□□ -1.17
HOXB3-209ENST00000478644 TBC1D8O95759 1140 aa7.75□□□□□ -1.17
HOXB3-209ENST00000478644 POLR3DP05423 398 aaPredicted RBP7.75□□□□□ -1.17
HOXB3-209ENST00000478644 CETPP11597 493 aa7.75□□□□□ -1.17
HOXB3-209ENST00000478644 FGFR2P21802 821 aa7.75□□□□□ -1.17
HOXB3-209ENST00000478644 GRIA4P48058 902 aa7.75□□□□□ -1.17
HOXB3-209ENST00000478644 PREPP48147 710 aa7.75□□□□□ -1.17
HOXB3-209ENST00000478644 NFIAQ12857 509 aa7.75□□□□□ -1.17
HOXB3-209ENST00000478644 EXOSC6Q5RKV6 272 aaKnown RBP7.75□□□□□ -1.17
HOXB3-209ENST00000478644 PRAMEF18Q5VWM3 479 aa7.75□□□□□ -1.17
HOXB3-209ENST00000478644 RNF43Q68DV7 783 aa7.75□□□□□ -1.17
HOXB3-209ENST00000478644 TMED8Q6PL24 325 aaPredicted RBP7.75□□□□□ -1.17
HOXB3-209ENST00000478644 ERO1BQ86YB8 467 aa7.75□□□□□ -1.17
HOXB3-209ENST00000478644 ANKRD44Q8N8A2 993 aa7.75□□□□□ -1.17
HOXB3-209ENST00000478644 DNAJC25Q9H1X3 360 aa7.75□□□□□ -1.17
HOXB3-209ENST00000478644 CLEC4MQ9H2X3 399 aaPredicted RBP7.75□□□□□ -1.17
HOXB3-209ENST00000478644 LIN7BQ9HAP6 207 aa7.75□□□□□ -1.17
HOXB3-209ENST00000478644 GNEQ9Y223 722 aaKnown RBP7.75□□□□□ -1.17
HOXB3-209ENST00000478644 ZNF646O15015 1829 aaPredicted RBP7.74□□□□□ -1.17
HOXB3-209ENST00000478644 CASP8AP2Q9UKL3 1982 aa7.74□□□□□ -1.17
HOXB3-209ENST00000478644 RBM47A0AV96 593 aaKnown RBP7.74□□□□□ -1.17
HOXB3-209ENST00000478644 CLRN2A0PK11 232 aa7.74□□□□□ -1.17
HOXB3-209ENST00000478644 METTL12A8MUP2 240 aa7.74□□□□□ -1.17
HOXB3-209ENST00000478644 SART1O43290 800 aaKnown RBP7.74□□□□□ -1.17
HOXB3-209ENST00000478644 CPNE3O75131 537 aaKnown RBP7.74□□□□□ -1.17
HOXB3-209ENST00000478644 DLGAP3O95886 979 aa7.74□□□□□ -1.17
HOXB3-209ENST00000478644 HOXD10P28358 340 aa7.74□□□□□ -1.17
HOXB3-209ENST00000478644 CD97P48960 835 aa7.74□□□□□ -1.17
HOXB3-209ENST00000478644 SP3Q02447 781 aa7.74□□□□□ -1.17
HOXB3-209ENST00000478644 PPATQ06203 517 aa7.74□□□□□ -1.17
HOXB3-209ENST00000478644 PRKG1Q13976 671 aa7.74□□□□□ -1.17
HOXB3-209ENST00000478644 ZNF423Q2M1K9 1284 aa7.74□□□□□ -1.17
HOXB3-209ENST00000478644 LRRC24Q50LG9 513 aa7.74□□□□□ -1.17
HOXB3-209ENST00000478644 NBPF12Q5TAG4 269 aaPredicted RBP7.74□□□□□ -1.17
HOXB3-209ENST00000478644 ATF7IPQ6VMQ6 1270 aa7.74□□□□□ -1.17
HOXB3-209ENST00000478644 MOB2Q70IA6 237 aa7.74□□□□□ -1.17
HOXB3-209ENST00000478644 ZDHHC13Q8IUH4 622 aa7.74□□□□□ -1.17
HOXB3-209ENST00000478644 TRIM42Q8IWZ5 723 aa7.74□□□□□ -1.17
HOXB3-209ENST00000478644 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.74□□□□□ -1.17
HOXB3-209ENST00000478644 FAM151AQ8WW52 585 aa7.74□□□□□ -1.17
HOXB3-209ENST00000478644 ALKBH8Q96BT7 664 aaKnown RBP7.74□□□□□ -1.17
HOXB3-209ENST00000478644 GCC1Q96CN9 775 aa7.74□□□□□ -1.17
HOXB3-209ENST00000478644 RBCK1Q9BYM8 510 aa7.74□□□□□ -1.17
HOXB3-209ENST00000478644 ZNF341Q9BYN7 854 aa7.74□□□□□ -1.17
HOXB3-209ENST00000478644 PUS3Q9BZE2 481 aaKnown RBP7.74□□□□□ -1.17
HOXB3-209ENST00000478644 TDRD3Q9H7E2 651 aaKnown RBP7.74□□□□□ -1.17
HOXB3-209ENST00000478644 COPRSQ9NQ92 184 aa7.74□□□□□ -1.17
HOXB3-209ENST00000478644 LDHBP07195 334 aaKnown RBP7.73□□□□□ -1.17
HOXB3-209ENST00000478644 LDHCP07864 332 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms