RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 LIMCH1Q9UPQ0 1083 aa7.91□□□□□ -1.14
BRCA1-215ENST00000478531 DEXIO95424 95 aa7.91□□□□□ -1.14
BRCA1-215ENST00000478531 C6orf222P0C671 652 aaPredicted RBP7.91□□□□□ -1.14
BRCA1-215ENST00000478531 SMPD1P17405 629 aa7.91□□□□□ -1.14
BRCA1-215ENST00000478531 FOSBP53539 338 aa7.91□□□□□ -1.14
BRCA1-215ENST00000478531 IRX5P78411 483 aaPredicted RBP7.91□□□□□ -1.14
BRCA1-215ENST00000478531 MLLT1Q03111 559 aaPredicted RBP7.91□□□□□ -1.14
BRCA1-215ENST00000478531 LRRC41Q15345 812 aa7.91□□□□□ -1.14
BRCA1-215ENST00000478531 CCDC83Q8IWF9 413 aa7.91□□□□□ -1.14
BRCA1-215ENST00000478531 CCDC148Q8NFR7 591 aa7.91□□□□□ -1.14
BRCA1-215ENST00000478531 SCFD2Q8WU76 684 aa7.91□□□□□ -1.14
BRCA1-215ENST00000478531 SPC25Q9HBM1 224 aa7.91□□□□□ -1.14
BRCA1-215ENST00000478531 TMEM260Q9NX78 707 aa7.91□□□□□ -1.14
BRCA1-215ENST00000478531 MYADML2A6NDP7 307 aa7.9□□□□□ -1.14
BRCA1-215ENST00000478531 DNM1LO00429 736 aa7.9□□□□□ -1.14
BRCA1-215ENST00000478531 SORBS3O60504 671 aa7.9□□□□□ -1.14
BRCA1-215ENST00000478531 JAK2O60674 1132 aa7.9□□□□□ -1.14
BRCA1-215ENST00000478531 DUSP11O75319 330 aaKnown RBP7.9□□□□□ -1.14
BRCA1-215ENST00000478531 ARIH2O95376 493 aa7.9□□□□□ -1.14
BRCA1-215ENST00000478531 CTDNEP1O95476 244 aa7.9□□□□□ -1.14
BRCA1-215ENST00000478531 MNX1P50219 401 aaPredicted RBP7.9□□□□□ -1.14
BRCA1-215ENST00000478531 BEX3Q00994 111 aa7.9□□□□□ -1.14
BRCA1-215ENST00000478531 FRMPD4Q14CM0 1322 aa7.9□□□□□ -1.14
BRCA1-215ENST00000478531 JAKMIP3Q5VZ66 844 aa7.9□□□□□ -1.14
BRCA1-215ENST00000478531 NECAB2Q7Z6G3 386 aa7.9□□□□□ -1.14
BRCA1-215ENST00000478531 RNF180Q86T96 592 aa7.9□□□□□ -1.14
BRCA1-215ENST00000478531 REXO1Q8N1G1 1221 aaKnown RBP7.9□□□□□ -1.14
BRCA1-215ENST00000478531 ANKLE1Q8NAG6 615 aa7.9□□□□□ -1.14
BRCA1-215ENST00000478531 ARRDC4Q8NCT1 418 aa7.9□□□□□ -1.14
BRCA1-215ENST00000478531 RASGRP4Q8TDF6 673 aa7.9□□□□□ -1.14
BRCA1-215ENST00000478531 COPS5Q92905 334 aa7.9□□□□□ -1.14
BRCA1-215ENST00000478531 FERMT2Q96AC1 680 aa7.9□□□□□ -1.14
BRCA1-215ENST00000478531 EHMT1Q9H9B1 1298 aa7.9□□□□□ -1.14
BRCA1-215ENST00000478531 C6orf50Q9HD87 102 aa7.9□□□□□ -1.14
BRCA1-215ENST00000478531 ORC3Q9UBD5 711 aaPredicted RBP7.9□□□□□ -1.14
BRCA1-215ENST00000478531 MRVI1Q9Y6F6 885 aa7.9□□□□□ -1.14
BRCA1-215ENST00000478531 STK36Q9NRP7 1315 aa7.9□□□□□ -1.15
BRCA1-215ENST00000478531 ADAMTS3O15072 1205 aa7.9□□□□□ -1.15
BRCA1-215ENST00000478531 DYNC1LI2O43237 492 aaPredicted RBP7.9□□□□□ -1.15
BRCA1-215ENST00000478531 ADAMTS4O75173 837 aa7.9□□□□□ -1.15
BRCA1-215ENST00000478531 EIF3JO75822 258 aaKnown RBP7.9□□□□□ -1.15
BRCA1-215ENST00000478531 CD2BP2O95400 341 aaKnown RBP7.9□□□□□ -1.15
BRCA1-215ENST00000478531 TXNP10599 105 aaKnown RBP7.9□□□□□ -1.15
BRCA1-215ENST00000478531 RGS19P49795 217 aa7.9□□□□□ -1.15
BRCA1-215ENST00000478531 NLRP5P59047 1200 aa7.9□□□□□ -1.15
BRCA1-215ENST00000478531 ST3GAL1Q11201 340 aa7.9□□□□□ -1.15
BRCA1-215ENST00000478531 TTLL4Q14679 1199 aa7.9□□□□□ -1.15
BRCA1-215ENST00000478531 LY6KQ17RY6 165 aa7.9□□□□□ -1.15
BRCA1-215ENST00000478531 IQSEC1Q6DN90 963 aa7.9□□□□□ -1.15
BRCA1-215ENST00000478531 VSIG10LQ86VR7 867 aa7.9□□□□□ -1.15
BRCA1-215ENST00000478531 NSUN7Q8NE18 718 aaKnown RBP7.9□□□□□ -1.15
BRCA1-215ENST00000478531 OR6J1Q8NGC5 347 aa7.9□□□□□ -1.15
BRCA1-215ENST00000478531 ANO3Q9BYT9 981 aa7.9□□□□□ -1.15
BRCA1-215ENST00000478531 SENP6Q9GZR1 1112 aaPredicted RBP7.9□□□□□ -1.15
BRCA1-215ENST00000478531 ZMYND12Q9H0C1 365 aa7.9□□□□□ -1.15
BRCA1-215ENST00000478531 AP5M1Q9H0R1 490 aa7.9□□□□□ -1.15
BRCA1-215ENST00000478531 GLT8D2Q9H1C3 349 aa7.9□□□□□ -1.15
BRCA1-215ENST00000478531 C11orf49Q9H6J7 331 aa7.9□□□□□ -1.15
BRCA1-215ENST00000478531 RTEL1Q9NZ71 1219 aa7.9□□□□□ -1.15
BRCA1-215ENST00000478531 PCDHA6Q9UN73 950 aa7.9□□□□□ -1.15
BRCA1-215ENST00000478531 GNEQ9Y223 722 aaKnown RBP7.9□□□□□ -1.15
BRCA1-215ENST00000478531 PCDHA8Q9Y5H6 950 aa7.9□□□□□ -1.15
BRCA1-215ENST00000478531 ESYT2A0FGR8 921 aa7.89□□□□□ -1.15
BRCA1-215ENST00000478531 GNA11P29992 359 aa7.89□□□□□ -1.15
BRCA1-215ENST00000478531 ATN1P54259 1190 aaPredicted RBP7.89□□□□□ -1.15
BRCA1-215ENST00000478531 MRPS9P82933 396 aaKnown RBP7.89□□□□□ -1.15
BRCA1-215ENST00000478531 FSCN1Q16658 493 aaKnown RBP7.89□□□□□ -1.15
BRCA1-215ENST00000478531 GNPTABQ3T906 1256 aa7.89□□□□□ -1.15
BRCA1-215ENST00000478531 DUSP28Q4G0W2 176 aa7.89□□□□□ -1.15
BRCA1-215ENST00000478531 GNASQ5JWF2 1037 aa7.89□□□□□ -1.15
BRCA1-215ENST00000478531 PCNX4Q63HM2 1172 aa7.89□□□□□ -1.15
BRCA1-215ENST00000478531 UBE2Q1Q7Z7E8 422 aa7.89□□□□□ -1.15
BRCA1-215ENST00000478531 BICD2Q8TD16 824 aa7.89□□□□□ -1.15
BRCA1-215ENST00000478531 ZSCAN31Q96LW9 406 aaPredicted RBP7.89□□□□□ -1.15
BRCA1-215ENST00000478531 ALG1Q9BT22 464 aa7.89□□□□□ -1.15
BRCA1-215ENST00000478531 SH3GLB2Q9NR46 395 aa7.89□□□□□ -1.15
BRCA1-215ENST00000478531 SH2B1Q9NRF2 756 aaPredicted RBP7.89□□□□□ -1.15
BRCA1-215ENST00000478531 GJB4Q9NTQ9 266 aa7.89□□□□□ -1.15
BRCA1-215ENST00000478531 KCNJ14Q9UNX9 436 aa7.89□□□□□ -1.15
BRCA1-215ENST00000478531 LAMA3Q16787 3333 aa7.89□□□□□ -1.15
BRCA1-215ENST00000478531 A0A1W2PQ45 241 aaPredicted RBP7.88□□□□□ -1.15
BRCA1-215ENST00000478531 A0A1W2PQY0 241 aa7.88□□□□□ -1.15
BRCA1-215ENST00000478531 RBM47A0AV96 593 aaKnown RBP7.88□□□□□ -1.15
BRCA1-215ENST00000478531 RGS20O76081 388 aa7.88□□□□□ -1.15
BRCA1-215ENST00000478531 FOSP01100 380 aaPredicted RBP7.88□□□□□ -1.15
BRCA1-215ENST00000478531 CAPN2P17655 700 aa7.88□□□□□ -1.15
BRCA1-215ENST00000478531 XBP1P17861 261 aa7.88□□□□□ -1.15
BRCA1-215ENST00000478531 CLK2P49760 499 aaKnown RBP7.88□□□□□ -1.15
BRCA1-215ENST00000478531 GJA9P57773 515 aa7.88□□□□□ -1.15
BRCA1-215ENST00000478531 AP3B2Q13367 1082 aa7.88□□□□□ -1.15
BRCA1-215ENST00000478531 KCNA10Q16322 511 aa7.88□□□□□ -1.15
BRCA1-215ENST00000478531 TMEM132AQ24JP5 1023 aa7.88□□□□□ -1.15
BRCA1-215ENST00000478531 WASF1Q92558 559 aa7.88□□□□□ -1.15
BRCA1-215ENST00000478531 DPF3Q92784 378 aa7.88□□□□□ -1.15
BRCA1-215ENST00000478531 UPF3AQ9H1J1 476 aaKnown RBP7.88□□□□□ -1.15
BRCA1-215ENST00000478531 PKD2L1Q9P0L9 805 aa7.88□□□□□ -1.15
BRCA1-215ENST00000478531 NKRFO15226 690 aaKnown RBP eCLIP7.88□□□□□ -1.15
BRCA1-215ENST00000478531 ASGR1P07306 291 aa7.88□□□□□ -1.15
BRCA1-215ENST00000478531 COL6A1P12109 1028 aa7.88□□□□□ -1.15
BRCA1-215ENST00000478531 FDPSP14324 419 aaKnown RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms