RNA–Protein interactions for RNA: ENST00000478245.1

TCTN3-205, Transcript of tectonic family member 3, humanhuman

TSL 2

Gene TCTN3, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-205ENST00000478245 CALML3P27482 149 aa11.16□□□□□ -0.62
TCTN3-205ENST00000478245 LTBRP36941 435 aa11.16□□□□□ -0.62
TCTN3-205ENST00000478245 HTRA4P83105 476 aaPredicted RBP11.16□□□□□ -0.62
TCTN3-205ENST00000478245 KCTD1Q719H9 257 aa11.16□□□□□ -0.62
TCTN3-205ENST00000478245 SESTD1Q86VW0 696 aa11.16□□□□□ -0.62
TCTN3-205ENST00000478245 ITPRIPQ8IWB1 547 aa11.16□□□□□ -0.62
TCTN3-205ENST00000478245 TMEM192Q8IY95 271 aa11.16□□□□□ -0.62
TCTN3-205ENST00000478245 C7orf31Q8N865 590 aa11.16□□□□□ -0.62
TCTN3-205ENST00000478245 SP7Q8TDD2 431 aaPredicted RBP11.16□□□□□ -0.62
TCTN3-205ENST00000478245 GMCL1Q96IK5 515 aa11.16□□□□□ -0.62
TCTN3-205ENST00000478245 CTAGE1Q96RT6 745 aa11.16□□□□□ -0.62
TCTN3-205ENST00000478245 PUS7LQ9H0K6 701 aaKnown RBP11.16□□□□□ -0.62
TCTN3-205ENST00000478245 PRR12Q9ULL5 1215 aa11.16□□□□□ -0.62
TCTN3-205ENST00000478245 CACNA1GO43497 2377 aa11.15□□□□□ -0.62
TCTN3-205ENST00000478245 B4DLN1 442 aa11.15□□□□□ -0.62
TCTN3-205ENST00000478245 PLA2G6O60733 806 aa11.15□□□□□ -0.62
TCTN3-205ENST00000478245 UPP2O95045 317 aa11.15□□□□□ -0.62
TCTN3-205ENST00000478245 ICAM1P05362 532 aa11.15□□□□□ -0.62
TCTN3-205ENST00000478245 MRPL12P52815 198 aaKnown RBP11.15□□□□□ -0.62
TCTN3-205ENST00000478245 RBL2Q08999 1139 aa11.15□□□□□ -0.62
TCTN3-205ENST00000478245 SMAD4Q13485 552 aaKnown RBP11.15□□□□□ -0.62
TCTN3-205ENST00000478245 ZNF618Q5T7W0 954 aa11.15□□□□□ -0.62
TCTN3-205ENST00000478245 RCSD1Q6JBY9 416 aa11.15□□□□□ -0.62
TCTN3-205ENST00000478245 CEP85Q6P2H3 762 aa11.15□□□□□ -0.62
TCTN3-205ENST00000478245 GIMAP6Q6P9H5 292 aa11.15□□□□□ -0.62
TCTN3-205ENST00000478245 ERMP1Q7Z2K6 904 aa11.15□□□□□ -0.62
TCTN3-205ENST00000478245 FBXO11Q86XK2 927 aa11.15□□□□□ -0.62
TCTN3-205ENST00000478245 FTSJ3Q8IY81 847 aaKnown RBP11.15□□□□□ -0.62
TCTN3-205ENST00000478245 AFG1LQ8WV93 481 aa11.15□□□□□ -0.62
TCTN3-205ENST00000478245 CD207Q9UJ71 328 aa11.15□□□□□ -0.62
TCTN3-205ENST00000478245 MTMR7Q9Y216 660 aa11.15□□□□□ -0.62
TCTN3-205ENST00000478245 VPS13AQ96RL7 3174 aa11.15□□□□□ -0.62
TCTN3-205ENST00000478245 EMSYQ7Z589 1322 aa11.14□□□□□ -0.63
TCTN3-205ENST00000478245 EPG5Q9HCE0 2579 aa11.14□□□□□ -0.63
TCTN3-205ENST00000478245 GSG1L2A8MUP6 293 aa11.14□□□□□ -0.63
TCTN3-205ENST00000478245 NFIBO00712 420 aa11.14□□□□□ -0.63
TCTN3-205ENST00000478245 CASTP20810 708 aaKnown RBP11.14□□□□□ -0.63
TCTN3-205ENST00000478245 TDO2P48775 406 aa11.14□□□□□ -0.63
TCTN3-205ENST00000478245 ZXDAP98168 799 aa11.14□□□□□ -0.63
TCTN3-205ENST00000478245 DLX2Q07687 328 aaPredicted RBP11.14□□□□□ -0.63
TCTN3-205ENST00000478245 PTK7Q13308 1070 aa11.14□□□□□ -0.63
TCTN3-205ENST00000478245 CTC1Q2NKJ3 1217 aa11.14□□□□□ -0.63
TCTN3-205ENST00000478245 CHST3Q7LGC8 479 aa11.14□□□□□ -0.63
TCTN3-205ENST00000478245 DBF4BQ8NFT6 615 aa11.14□□□□□ -0.63
TCTN3-205ENST00000478245 KIF1BPQ96EK5 621 aa11.14□□□□□ -0.63
TCTN3-205ENST00000478245 STRBPQ96SI9 672 aaKnown RBP11.14□□□□□ -0.63
TCTN3-205ENST00000478245 ALG1Q9BT22 464 aa11.14□□□□□ -0.63
TCTN3-205ENST00000478245 IGFLR1Q9H665 355 aa11.14□□□□□ -0.63
TCTN3-205ENST00000478245 GTF2IRD1Q9UHL9 959 aa11.14□□□□□ -0.63
TCTN3-205ENST00000478245 ZNF292O60281 2723 aa11.14□□□□□ -0.63
TCTN3-205ENST00000478245 TPRP12270 2363 aaKnown RBP11.13□□□□□ -0.63
TCTN3-205ENST00000478245 H0Y858 1186 aa11.13□□□□□ -0.63
TCTN3-205ENST00000478245 APPP05067 770 aa11.13□□□□□ -0.63
TCTN3-205ENST00000478245 MMP3P08254 477 aa11.13□□□□□ -0.63
TCTN3-205ENST00000478245 ATP5JP18859 108 aa11.13□□□□□ -0.63
TCTN3-205ENST00000478245 CTNNB1P35222 781 aa11.13□□□□□ -0.63
TCTN3-205ENST00000478245 HYAL1Q12794 435 aa11.13□□□□□ -0.63
TCTN3-205ENST00000478245 MKRN4PQ13434 485 aaPredicted RBP11.13□□□□□ -0.63
TCTN3-205ENST00000478245 MBTPS1Q14703 1052 aa11.13□□□□□ -0.63
TCTN3-205ENST00000478245 CCDC96Q2M329 555 aa11.13□□□□□ -0.63
TCTN3-205ENST00000478245 SLC30A10Q6XR72 485 aa11.13□□□□□ -0.63
TCTN3-205ENST00000478245 RNF207Q6ZRF8 634 aa11.13□□□□□ -0.63
TCTN3-205ENST00000478245 NEDD1Q8NHV4 660 aa11.13□□□□□ -0.63
TCTN3-205ENST00000478245 KAT2BQ92831 832 aa11.13□□□□□ -0.63
TCTN3-205ENST00000478245 HAUS7Q99871 368 aa11.13□□□□□ -0.63
TCTN3-205ENST00000478245 TLR9Q9NR96 1032 aa11.13□□□□□ -0.63
TCTN3-205ENST00000478245 HDAC6Q9UBN7 1215 aa11.13□□□□□ -0.63
TCTN3-205ENST00000478245 STX8Q9UNK0 236 aa11.13□□□□□ -0.63
TCTN3-205ENST00000478245 MYO10Q9HD67 2058 aa11.13□□□□□ -0.63
TCTN3-205ENST00000478245 EP300Q09472 2414 aaPredicted RBP11.12□□□□□ -0.63
TCTN3-205ENST00000478245 RBAK-RBAKDNI3L0D1 243 aa11.12□□□□□ -0.63
TCTN3-205ENST00000478245 KDM4AO75164 1064 aa11.12□□□□□ -0.63
TCTN3-205ENST00000478245 CSPG5O95196 566 aa11.12□□□□□ -0.63
TCTN3-205ENST00000478245 GH1P01241 217 aa11.12□□□□□ -0.63
TCTN3-205ENST00000478245 AVPR2P30518 371 aa11.12□□□□□ -0.63
TCTN3-205ENST00000478245 ID4P47928 161 aa11.12□□□□□ -0.63
TCTN3-205ENST00000478245 PSEN2P49810 448 aa11.12□□□□□ -0.63
TCTN3-205ENST00000478245 NDUFV1P49821 464 aa11.12□□□□□ -0.63
TCTN3-205ENST00000478245 VCPP55072 806 aaKnown RBP11.12□□□□□ -0.63
TCTN3-205ENST00000478245 TFAP4Q01664 338 aa11.12□□□□□ -0.63
TCTN3-205ENST00000478245 DGKDQ16760 1214 aa11.12□□□□□ -0.63
TCTN3-205ENST00000478245 PPP4R3BQ5MIZ7 849 aa11.12□□□□□ -0.63
TCTN3-205ENST00000478245 DHX37Q8IY37 1157 aaKnown RBP11.12□□□□□ -0.63
TCTN3-205ENST00000478245 FIBCD1Q8N539 461 aa11.12□□□□□ -0.63
TCTN3-205ENST00000478245 DNERQ8NFT8 737 aa11.12□□□□□ -0.63
TCTN3-205ENST00000478245 C11orf84Q9BUA3 381 aaPredicted RBP11.12□□□□□ -0.63
TCTN3-205ENST00000478245 KATNAL1Q9BW62 490 aa11.12□□□□□ -0.63
TCTN3-205ENST00000478245 LMAN2LQ9H0V9 348 aa11.12□□□□□ -0.63
TCTN3-205ENST00000478245 KAT6AQ92794 2004 aa11.12□□□□□ -0.63
TCTN3-205ENST00000478245 PLIN4Q96Q06 1357 aa11.12□□□□□ -0.63
TCTN3-205ENST00000478245 DCHS1Q96JQ0 3298 aa11.11□□□□□ -0.63
TCTN3-205ENST00000478245 RSPH10B2B2RC85 870 aa11.11□□□□□ -0.63
TCTN3-205ENST00000478245 LINC01565O15544 149 aa11.11□□□□□ -0.63
TCTN3-205ENST00000478245 TBX10O75333 385 aa11.11□□□□□ -0.63
TCTN3-205ENST00000478245 ARIH2O95376 493 aa11.11□□□□□ -0.63
TCTN3-205ENST00000478245 SLC3A2P08195 630 aaKnown RBP11.11□□□□□ -0.63
TCTN3-205ENST00000478245 RSPH10BP0C881 870 aa11.11□□□□□ -0.63
TCTN3-205ENST00000478245 GTF2F1P35269 517 aaKnown RBP eCLIP11.11□□□□□ -0.63
TCTN3-205ENST00000478245 SLC16A2P36021 539 aa11.11□□□□□ -0.63
TCTN3-205ENST00000478245 THPOP40225 353 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms