RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 MAP2K1Q02750 393 aaPredicted RBP5.7□□□□□ -1.5
SF3B6-202ENST00000478050 DPYDQ12882 1025 aa5.7□□□□□ -1.5
SF3B6-202ENST00000478050 IQCB1Q15051 598 aa5.7□□□□□ -1.5
SF3B6-202ENST00000478050 PUM3Q15397 648 aaKnown RBP5.7□□□□□ -1.5
SF3B6-202ENST00000478050 SF3A1Q15459 793 aaKnown RBP5.7□□□□□ -1.5
SF3B6-202ENST00000478050 GLIPR1L2Q4G1C9 344 aa5.7□□□□□ -1.5
SF3B6-202ENST00000478050 PARP10Q53GL7 1025 aa5.7□□□□□ -1.5
SF3B6-202ENST00000478050 ADALQ6DHV7 355 aa5.7□□□□□ -1.5
SF3B6-202ENST00000478050 CHST3Q7LGC8 479 aa5.7□□□□□ -1.5
SF3B6-202ENST00000478050 LUZP1Q86V48 1076 aa5.7□□□□□ -1.5
SF3B6-202ENST00000478050 DRC7Q8IY82 874 aa5.7□□□□□ -1.5
SF3B6-202ENST00000478050 CEP57L1Q8IYX8 460 aa5.7□□□□□ -1.5
SF3B6-202ENST00000478050 ZNF34Q8IZ26 560 aa5.7□□□□□ -1.5
SF3B6-202ENST00000478050 AGGF1Q8N302 714 aaeCLIP5.7□□□□□ -1.5
SF3B6-202ENST00000478050 SPC24Q8NBT2 197 aa5.7□□□□□ -1.5
SF3B6-202ENST00000478050 ENGASEQ8NFI3 743 aa5.7□□□□□ -1.5
SF3B6-202ENST00000478050 FBXO18Q8NFZ0 1043 aa5.7□□□□□ -1.5
SF3B6-202ENST00000478050 LPIN2Q92539 896 aa5.7□□□□□ -1.5
SF3B6-202ENST00000478050 PLD4Q96BZ4 506 aa5.7□□□□□ -1.5
SF3B6-202ENST00000478050 IFT43Q96FT9 208 aa5.7□□□□□ -1.5
SF3B6-202ENST00000478050 MRFAP1L1Q96HT8 127 aa5.7□□□□□ -1.5
SF3B6-202ENST00000478050 ZNF830Q96NB3 372 aaPredicted RBP5.7□□□□□ -1.5
SF3B6-202ENST00000478050 TRIM5Q9C035 493 aa5.7□□□□□ -1.5
SF3B6-202ENST00000478050 NAT10Q9H0A0 1025 aaKnown RBP5.7□□□□□ -1.5
SF3B6-202ENST00000478050 DNAJC25Q9H1X3 360 aa5.7□□□□□ -1.5
SF3B6-202ENST00000478050 PDCL3Q9H2J4 239 aa5.7□□□□□ -1.5
SF3B6-202ENST00000478050 KCNF1Q9H3M0 494 aa5.7□□□□□ -1.5
SF3B6-202ENST00000478050 GOLPH3LQ9H4A5 285 aa5.7□□□□□ -1.5
SF3B6-202ENST00000478050 ANGEL1Q9UNK9 670 aaKnown RBP5.7□□□□□ -1.5
SF3B6-202ENST00000478050 ZBTB1Q9Y2K1 713 aa5.7□□□□□ -1.5
SF3B6-202ENST00000478050 KIAA1551Q9HCM1 1747 aa5.7□□□□□ -1.5
SF3B6-202ENST00000478050 PNPLA7Q6ZV29 1317 aa5.7□□□□□ -1.5
SF3B6-202ENST00000478050 STK36Q9NRP7 1315 aa5.7□□□□□ -1.5
SF3B6-202ENST00000478050 CNTNAP1P78357 1384 aa5.69□□□□□ -1.5
SF3B6-202ENST00000478050 NID2Q14112 1375 aa5.69□□□□□ -1.5
SF3B6-202ENST00000478050 TCRBV5S4A2TA0A5A2 114 aa5.69□□□□□ -1.5
SF3B6-202ENST00000478050 BECN2A8MW95 431 aa5.69□□□□□ -1.5
SF3B6-202ENST00000478050 SPTLC2O15270 562 aa5.69□□□□□ -1.5
SF3B6-202ENST00000478050 IDH1O75874 414 aaKnown RBP5.69□□□□□ -1.5
SF3B6-202ENST00000478050 GHRHP01286 108 aa5.69□□□□□ -1.5
SF3B6-202ENST00000478050 PDE6AP16499 860 aa5.69□□□□□ -1.5
SF3B6-202ENST00000478050 GTF2F1P35269 517 aaKnown RBP eCLIP5.69□□□□□ -1.5
SF3B6-202ENST00000478050 PHKA1P46020 1223 aa5.69□□□□□ -1.5
SF3B6-202ENST00000478050 SERPINB4P48594 390 aa5.69□□□□□ -1.5
SF3B6-202ENST00000478050 METAP2P50579 478 aaKnown RBP eCLIP5.69□□□□□ -1.5
SF3B6-202ENST00000478050 NRLP54845 237 aa5.69□□□□□ -1.5
SF3B6-202ENST00000478050 KIF23Q02241 960 aaPredicted RBP5.69□□□□□ -1.5
SF3B6-202ENST00000478050 CEBPZQ03701 1054 aaKnown RBP5.69□□□□□ -1.5
SF3B6-202ENST00000478050 MAP3K12Q12852 859 aa5.69□□□□□ -1.5
SF3B6-202ENST00000478050 NFIAQ12857 509 aa5.69□□□□□ -1.5
SF3B6-202ENST00000478050 CHAF1AQ13111 956 aaPredicted RBP5.69□□□□□ -1.5
SF3B6-202ENST00000478050 SNW1Q13573 536 aaKnown RBP5.69□□□□□ -1.5
SF3B6-202ENST00000478050 DHX8Q14562 1220 aaKnown RBP5.69□□□□□ -1.5
SF3B6-202ENST00000478050 ZRSR1Q15695 479 aaKnown RBP5.69□□□□□ -1.5
SF3B6-202ENST00000478050 SLC9C2Q5TAH2 1124 aa5.69□□□□□ -1.5
SF3B6-202ENST00000478050 SYNE3Q6ZMZ3 975 aa5.69□□□□□ -1.5
SF3B6-202ENST00000478050 Q6ZS46 218 aa5.69□□□□□ -1.5
SF3B6-202ENST00000478050 ARHGAP27Q6ZUM4 889 aa5.69□□□□□ -1.5
SF3B6-202ENST00000478050 ZDHHC13Q8IUH4 622 aa5.69□□□□□ -1.5
SF3B6-202ENST00000478050 LINC00301Q8NCQ3 95 aa5.69□□□□□ -1.5
SF3B6-202ENST00000478050 CLP1Q92989 425 aaKnown RBP5.69□□□□□ -1.5
SF3B6-202ENST00000478050 BPIFA3Q9BQP9 254 aa5.69□□□□□ -1.5
SF3B6-202ENST00000478050 MTA3Q9BTC8 594 aa5.69□□□□□ -1.5
SF3B6-202ENST00000478050 CEP41Q9BYV8 373 aa5.69□□□□□ -1.5
SF3B6-202ENST00000478050 CNNM2Q9H8M5 875 aa5.69□□□□□ -1.5
SF3B6-202ENST00000478050 PIH1D3Q9NQM4 214 aaKnown RBP5.69□□□□□ -1.5
SF3B6-202ENST00000478050 BIN2Q9UBW5 565 aaPredicted RBP5.69□□□□□ -1.5
SF3B6-202ENST00000478050 DMGDHQ9UI17 866 aaKnown RBP5.69□□□□□ -1.5
SF3B6-202ENST00000478050 PCDHA7Q9UN72 937 aa5.69□□□□□ -1.5
SF3B6-202ENST00000478050 BAZ2AQ9UIF9 1905 aaKnown RBP5.69□□□□□ -1.5
SF3B6-202ENST00000478050 UBN2Q6ZU65 1347 aa5.69□□□□□ -1.5
SF3B6-202ENST00000478050 ZNF532Q9HCE3 1301 aa5.69□□□□□ -1.5
SF3B6-202ENST00000478050 COL24A1Q17RW2 1714 aa5.68□□□□□ -1.5
SF3B6-202ENST00000478050 ZBTB43O43298 467 aa5.68□□□□□ -1.5
SF3B6-202ENST00000478050 PPP6R2O75170 966 aa5.68□□□□□ -1.5
SF3B6-202ENST00000478050 ADAMTS4O75173 837 aa5.68□□□□□ -1.5
SF3B6-202ENST00000478050 APPP05067 770 aa5.68□□□□□ -1.5
SF3B6-202ENST00000478050 GNAT2P19087 354 aa5.68□□□□□ -1.5
SF3B6-202ENST00000478050 SPINK2P20155 84 aa5.68□□□□□ -1.5
SF3B6-202ENST00000478050 PTGS1P23219 599 aa5.68□□□□□ -1.5
SF3B6-202ENST00000478050 INPP5BP32019 993 aa5.68□□□□□ -1.5
SF3B6-202ENST00000478050 SCNN1AP37088 669 aa5.68□□□□□ -1.5
SF3B6-202ENST00000478050 LIFRP42702 1097 aa5.68□□□□□ -1.5
SF3B6-202ENST00000478050 ARSDP51689 593 aa5.68□□□□□ -1.5
SF3B6-202ENST00000478050 EIF5P55010 431 aaKnown RBP5.68□□□□□ -1.5
SF3B6-202ENST00000478050 TPM4P67936 248 aa5.68□□□□□ -1.5
SF3B6-202ENST00000478050 TRIM29Q14134 588 aa5.68□□□□□ -1.5
SF3B6-202ENST00000478050 CCDC152Q4G0S7 254 aa5.68□□□□□ -1.5
SF3B6-202ENST00000478050 C9orf131Q5VYM1 1079 aa5.68□□□□□ -1.5
SF3B6-202ENST00000478050 ANO1Q5XXA6 986 aa5.68□□□□□ -1.5
SF3B6-202ENST00000478050 APOA5Q6Q788 366 aa5.68□□□□□ -1.5
SF3B6-202ENST00000478050 PI16Q6UXB8 463 aa5.68□□□□□ -1.5
SF3B6-202ENST00000478050 C11orf57Q6ZUT1 292 aaPredicted RBP5.68□□□□□ -1.5
SF3B6-202ENST00000478050 CYB5R4Q7L1T6 521 aa5.68□□□□□ -1.5
SF3B6-202ENST00000478050 CCDC186Q7Z3E2 898 aa5.68□□□□□ -1.5
SF3B6-202ENST00000478050 SGMS1Q86VZ5 419 aa5.68□□□□□ -1.5
SF3B6-202ENST00000478050 TBC1D10CQ8IV04 446 aa5.68□□□□□ -1.5
SF3B6-202ENST00000478050 SYNE4Q8N205 404 aa5.68□□□□□ -1.5
SF3B6-202ENST00000478050 SPATA5Q8NB90 893 aa5.68□□□□□ -1.5
SF3B6-202ENST00000478050 WASF1Q92558 559 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms