RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 PLEKHO2Q8TD55 490 aa6.1□□□□□ -1.43
NCKAP1-204ENST00000477988 SEMA4AQ9H3S1 761 aa6.1□□□□□ -1.43
NCKAP1-204ENST00000477988 PHAXQ9H814 394 aaKnown RBP6.1□□□□□ -1.43
NCKAP1-204ENST00000477988 SIT1Q9Y3P8 196 aa6.1□□□□□ -1.43
NCKAP1-204ENST00000477988 PATE3B3GLJ2 98 aa6.09□□□□□ -1.43
NCKAP1-204ENST00000477988 DDX3XO00571 662 aaKnown RBP eCLIP6.09□□□□□ -1.43
NCKAP1-204ENST00000477988 MUSKO15146 869 aa6.09□□□□□ -1.43
NCKAP1-204ENST00000477988 ITGA1P56199 1179 aa6.09□□□□□ -1.43
NCKAP1-204ENST00000477988 DPY19L1Q2PZI1 675 aa6.09□□□□□ -1.43
NCKAP1-204ENST00000477988 GNPTABQ3T906 1256 aa6.09□□□□□ -1.43
NCKAP1-204ENST00000477988 CD300LDQ6UXZ3 194 aa6.09□□□□□ -1.43
NCKAP1-204ENST00000477988 SEC14L1Q92503 715 aa6.09□□□□□ -1.43
NCKAP1-204ENST00000477988 CGGBP1Q9UFW8 167 aaPredicted RBP6.09□□□□□ -1.43
NCKAP1-204ENST00000477988 ADAT2Q7Z6V5 191 aaKnown RBP6.08□□□□□ -1.44
NCKAP1-204ENST00000477988 IGDCC4Q8TDY8 1250 aa6.08□□□□□ -1.44
NCKAP1-204ENST00000477988 CHFRQ96EP1 664 aa6.08□□□□□ -1.44
NCKAP1-204ENST00000477988 MMP19Q99542 508 aa6.08□□□□□ -1.44
NCKAP1-204ENST00000477988 TCAF1Q9Y4C2 921 aa6.08□□□□□ -1.44
NCKAP1-204ENST00000477988 WDR33Q9C0J8 1336 aaKnown RBP6.07□□□□□ -1.44
NCKAP1-204ENST00000477988 SGSM2O43147 1006 aa6.07□□□□□ -1.44
NCKAP1-204ENST00000477988 SLC6A11P48066 632 aa6.07□□□□□ -1.44
NCKAP1-204ENST00000477988 EPHB4P54760 987 aa6.07□□□□□ -1.44
NCKAP1-204ENST00000477988 COL9A2Q14055 689 aaPredicted RBP6.07□□□□□ -1.44
NCKAP1-204ENST00000477988 FAM126BQ8IXS8 530 aa6.07□□□□□ -1.44
NCKAP1-204ENST00000477988 FAM26EQ8N5C1 309 aa6.07□□□□□ -1.44
NCKAP1-204ENST00000477988 MBD6Q96DN6 1003 aa6.07□□□□□ -1.44
NCKAP1-204ENST00000477988 PPT2Q9UMR5 302 aa6.07□□□□□ -1.44
NCKAP1-204ENST00000477988 TNFRSF18Q9Y5U5 241 aa6.07□□□□□ -1.44
NCKAP1-204ENST00000477988 NPIPB8E9PQR5 432 aa6.06□□□□□ -1.44
NCKAP1-204ENST00000477988 SLC7A5Q01650 507 aa6.06□□□□□ -1.44
NCKAP1-204ENST00000477988 CCDC27Q2M243 656 aa6.06□□□□□ -1.44
NCKAP1-204ENST00000477988 C19orf47Q8N9M1 422 aaKnown RBP6.06□□□□□ -1.44
NCKAP1-204ENST00000477988 TMEM87AQ8NBN3 555 aa6.06□□□□□ -1.44
NCKAP1-204ENST00000477988 CRBNQ96SW2 442 aa6.06□□□□□ -1.44
NCKAP1-204ENST00000477988 BCL2L13Q9BXK5 485 aa6.06□□□□□ -1.44
NCKAP1-204ENST00000477988 PCSK5Q92824 1860 aa6.05□□□□□ -1.44
NCKAP1-204ENST00000477988 EPHX1P07099 455 aa6.05□□□□□ -1.44
NCKAP1-204ENST00000477988 ZNF28P17035 718 aa6.05□□□□□ -1.44
NCKAP1-204ENST00000477988 PPP2CBP62714 309 aa6.05□□□□□ -1.44
NCKAP1-204ENST00000477988 PPP2CAP67775 309 aa6.05□□□□□ -1.44
NCKAP1-204ENST00000477988 PKN3Q6P5Z2 889 aa6.05□□□□□ -1.44
NCKAP1-204ENST00000477988 COPS5Q92905 334 aa6.05□□□□□ -1.44
NCKAP1-204ENST00000477988 FGD4Q96M96 766 aa6.05□□□□□ -1.44
NCKAP1-204ENST00000477988 ZNF341Q9BYN7 854 aa6.05□□□□□ -1.44
NCKAP1-204ENST00000477988 MARCH2Q9P0N8 246 aa6.05□□□□□ -1.44
NCKAP1-204ENST00000477988 ZNF623O75123 536 aa6.04□□□□□ -1.44
NCKAP1-204ENST00000477988 CYP7B1O75881 506 aa6.04□□□□□ -1.44
NCKAP1-204ENST00000477988 CYP1A1P04798 512 aaPredicted RBP6.04□□□□□ -1.44
NCKAP1-204ENST00000477988 ZNF76P36508 570 aa6.04□□□□□ -1.44
NCKAP1-204ENST00000477988 NKX3-2P78367 333 aa6.04□□□□□ -1.44
NCKAP1-204ENST00000477988 FOXE3Q13461 319 aa6.04□□□□□ -1.44
NCKAP1-204ENST00000477988 MIIPQ5JXC2 388 aa6.04□□□□□ -1.44
NCKAP1-204ENST00000477988 MROH9Q5TGP6 573 aa6.04□□□□□ -1.44
NCKAP1-204ENST00000477988 PRAMEF18Q5VWM3 479 aa6.04□□□□□ -1.44
NCKAP1-204ENST00000477988 STK32CQ86UX6 486 aa6.04□□□□□ -1.44
NCKAP1-204ENST00000477988 RIOX2Q8IUF8 465 aa6.04□□□□□ -1.44
NCKAP1-204ENST00000477988 DPF3Q92784 378 aa6.04□□□□□ -1.44
NCKAP1-204ENST00000477988 CLEC1BQ9P126 229 aa6.04□□□□□ -1.44
NCKAP1-204ENST00000477988 C22orf46C9J442 243 aa6.03□□□□□ -1.44
NCKAP1-204ENST00000477988 THBDP07204 575 aa6.03□□□□□ -1.44
NCKAP1-204ENST00000477988 ADAM9Q13443 819 aa6.03□□□□□ -1.44
NCKAP1-204ENST00000477988 CR1LQ2VPA4 569 aa6.03□□□□□ -1.44
NCKAP1-204ENST00000477988 LDLRAD1Q5T700 205 aa6.03□□□□□ -1.44
NCKAP1-204ENST00000477988 MILR1Q7Z6M3 343 aa6.03□□□□□ -1.44
NCKAP1-204ENST00000477988 CRACR2BQ8N4Y2 399 aaPredicted RBP6.03□□□□□ -1.44
NCKAP1-204ENST00000477988 AMER2Q8N7J2 671 aa6.03□□□□□ -1.44
NCKAP1-204ENST00000477988 OR6P1Q8NGX9 317 aa6.03□□□□□ -1.44
NCKAP1-204ENST00000477988 Q8TCH9 128 aa6.03□□□□□ -1.44
NCKAP1-204ENST00000477988 GIPC2Q8TF65 315 aa6.03□□□□□ -1.44
NCKAP1-204ENST00000477988 YTHDC1Q96MU7 727 aaKnown RBP6.03□□□□□ -1.44
NCKAP1-204ENST00000477988 CEP89Q96ST8 783 aa6.03□□□□□ -1.44
NCKAP1-204ENST00000477988 TMEM168Q9H0V1 697 aa6.03□□□□□ -1.44
NCKAP1-204ENST00000477988 SUGT1Q9Y2Z0 365 aa6.03□□□□□ -1.44
NCKAP1-204ENST00000477988 PLS3P13797 630 aa6.02□□□□□ -1.45
NCKAP1-204ENST00000477988 IL13P35225 146 aa6.02□□□□□ -1.45
NCKAP1-204ENST00000477988 DPTQ07507 201 aa6.02□□□□□ -1.45
NCKAP1-204ENST00000477988 MBLAC2Q68D91 279 aa6.02□□□□□ -1.45
NCKAP1-204ENST00000477988 IGFL4Q6B9Z1 124 aa6.02□□□□□ -1.45
NCKAP1-204ENST00000477988 IQCEQ6IPM2 695 aa6.02□□□□□ -1.45
NCKAP1-204ENST00000477988 POMZP3Q6PJE2 187 aa6.02□□□□□ -1.45
NCKAP1-204ENST00000477988 ARHGEF18Q6ZSZ5 1173 aa6.02□□□□□ -1.45
NCKAP1-204ENST00000477988 KLHL6Q8WZ60 621 aa6.02□□□□□ -1.45
NCKAP1-204ENST00000477988 SPATA32Q96LK8 384 aa6.02□□□□□ -1.45
NCKAP1-204ENST00000477988 PTPN18Q99952 460 aa6.02□□□□□ -1.45
NCKAP1-204ENST00000477988 IKZF4Q9H2S9 585 aa6.02□□□□□ -1.45
NCKAP1-204ENST00000477988 L2HGDHQ9H9P8 463 aa6.02□□□□□ -1.45
NCKAP1-204ENST00000477988 METTL5Q9NRN9 209 aaKnown RBP6.02□□□□□ -1.45
NCKAP1-204ENST00000477988 AKT3Q9Y243 479 aa6.02□□□□□ -1.45
NCKAP1-204ENST00000477988 A0A1W2PQH9 124 aa6.01□□□□□ -1.45
NCKAP1-204ENST00000477988 ANKRD34BA5PLL1 514 aa6.01□□□□□ -1.45
NCKAP1-204ENST00000477988 EIF6P56537 245 aaKnown RBP6.01□□□□□ -1.45
NCKAP1-204ENST00000477988 NANOS3P60323 173 aaKnown RBP6.01□□□□□ -1.45
NCKAP1-204ENST00000477988 SLFN13Q68D06 897 aa6.01□□□□□ -1.45
NCKAP1-204ENST00000477988 TEX2Q8IWB9 1127 aa6.01□□□□□ -1.45
NCKAP1-204ENST00000477988 Q8N1Y9 231 aa6.01□□□□□ -1.45
NCKAP1-204ENST00000477988 ZNF513Q8N8E2 541 aaPredicted RBP6.01□□□□□ -1.45
NCKAP1-204ENST00000477988 ZNF503Q96F45 646 aa6.01□□□□□ -1.45
NCKAP1-204ENST00000477988 PCDHB10Q9UN67 800 aa6.01□□□□□ -1.45
NCKAP1-204ENST00000477988 EMC9Q9Y3B6 208 aa6.01□□□□□ -1.45
NCKAP1-204ENST00000477988 X6R8D5 127 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms