RNA–Protein interactions for RNA: ENST00000477939.1

TRA2B-211, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-211ENST00000477939 LRRC49Q8IUZ0 686 aa6.67□□□□□ -1.34
TRA2B-211ENST00000477939 SPICE1Q8N0Z3 855 aa6.67□□□□□ -1.34
TRA2B-211ENST00000477939 CEP63Q96MT8 703 aa6.67□□□□□ -1.34
TRA2B-211ENST00000477939 HAUS7Q99871 368 aa6.67□□□□□ -1.34
TRA2B-211ENST00000477939 TANGO6Q9C0B7 1094 aa6.67□□□□□ -1.34
TRA2B-211ENST00000477939 SPATC1LQ9H0A9 340 aa6.67□□□□□ -1.34
TRA2B-211ENST00000477939 TSPY26PQ9H489 355 aa6.67□□□□□ -1.34
TRA2B-211ENST00000477939 TOMM22Q9NS69 142 aa6.67□□□□□ -1.34
TRA2B-211ENST00000477939 DKK3Q9UBP4 350 aa6.67□□□□□ -1.34
TRA2B-211ENST00000477939 CLIP2Q9UDT6 1046 aa6.67□□□□□ -1.34
TRA2B-211ENST00000477939 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.67□□□□□ -1.34
TRA2B-211ENST00000477939 DDX20Q9UHI6 824 aaKnown RBP6.67□□□□□ -1.34
TRA2B-211ENST00000477939 DDX41Q9UJV9 622 aaKnown RBP6.67□□□□□ -1.34
TRA2B-211ENST00000477939 RABL2BQ9UNT1 228 aa6.67□□□□□ -1.34
TRA2B-211ENST00000477939 TMX2Q9Y320 296 aa6.67□□□□□ -1.34
TRA2B-211ENST00000477939 IVNS1ABPQ9Y6Y0 642 aa6.67□□□□□ -1.34
TRA2B-211ENST00000477939 ZNFX1Q9P2E3 1918 aaKnown RBP6.66□□□□□ -1.34
TRA2B-211ENST00000477939 GOLGA6L10A6NI86 522 aa6.66□□□□□ -1.34
TRA2B-211ENST00000477939 USP17L12C9JPN9 530 aa6.66□□□□□ -1.34
TRA2B-211ENST00000477939 USP17L21D6R901 530 aa6.66□□□□□ -1.34
TRA2B-211ENST00000477939 F8VZ95 297 aa6.66□□□□□ -1.34
TRA2B-211ENST00000477939 TRAK2O60296 914 aa6.66□□□□□ -1.34
TRA2B-211ENST00000477939 COBLO75128 1261 aa6.66□□□□□ -1.34
TRA2B-211ENST00000477939 FLOT1O75955 427 aa6.66□□□□□ -1.34
TRA2B-211ENST00000477939 CDK8P49336 464 aa6.66□□□□□ -1.34
TRA2B-211ENST00000477939 ZNF132P52740 706 aa6.66□□□□□ -1.34
TRA2B-211ENST00000477939 COG2Q14746 738 aa6.66□□□□□ -1.34
TRA2B-211ENST00000477939 UBE3CQ15386 1083 aa6.66□□□□□ -1.34
TRA2B-211ENST00000477939 C12orf60Q5U649 245 aa6.66□□□□□ -1.34
TRA2B-211ENST00000477939 OLFML2BQ68BL8 750 aa6.66□□□□□ -1.34
TRA2B-211ENST00000477939 TTC19Q6DKK2 380 aaPredicted RBP6.66□□□□□ -1.34
TRA2B-211ENST00000477939 C16orf86Q6ZW13 317 aa6.66□□□□□ -1.34
TRA2B-211ENST00000477939 TRIM42Q8IWZ5 723 aa6.66□□□□□ -1.34
TRA2B-211ENST00000477939 CCDC65Q8IXS2 484 aa6.66□□□□□ -1.34
TRA2B-211ENST00000477939 ELOA2Q8IYF1 753 aaPredicted RBP6.66□□□□□ -1.34
TRA2B-211ENST00000477939 TDHQ8IZJ6 230 aa6.66□□□□□ -1.34
TRA2B-211ENST00000477939 TTC30BQ8N4P2 665 aa6.66□□□□□ -1.34
TRA2B-211ENST00000477939 PHC3Q8NDX5 983 aa6.66□□□□□ -1.34
TRA2B-211ENST00000477939 SHCBP1Q8NEM2 672 aa6.66□□□□□ -1.34
TRA2B-211ENST00000477939 LPAR1Q92633 364 aa6.66□□□□□ -1.34
TRA2B-211ENST00000477939 MIEF2Q96C03 454 aa6.66□□□□□ -1.34
TRA2B-211ENST00000477939 ATG4CQ96DT6 458 aa6.66□□□□□ -1.34
TRA2B-211ENST00000477939 BICD1Q96G01 975 aa6.66□□□□□ -1.34
TRA2B-211ENST00000477939 PLEKHG4BQ96PX9 1271 aa6.66□□□□□ -1.34
TRA2B-211ENST00000477939 MPHOSPH6Q99547 160 aaKnown RBP6.66□□□□□ -1.34
TRA2B-211ENST00000477939 PANK2Q9BZ23 570 aa6.66□□□□□ -1.34
TRA2B-211ENST00000477939 TRIM6Q9C030 488 aaPredicted RBP6.66□□□□□ -1.34
TRA2B-211ENST00000477939 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.66□□□□□ -1.34
TRA2B-211ENST00000477939 PUS7LQ9H0K6 701 aaKnown RBP6.66□□□□□ -1.34
TRA2B-211ENST00000477939 VCPKMTQ9H867 229 aa6.66□□□□□ -1.34
TRA2B-211ENST00000477939 HOMER3Q9NSC5 361 aa6.66□□□□□ -1.34
TRA2B-211ENST00000477939 ATP8A2Q9NTI2 1148 aa6.66□□□□□ -1.34
TRA2B-211ENST00000477939 RCAN3Q9UKA8 241 aa6.66□□□□□ -1.34
TRA2B-211ENST00000477939 ROBO3Q96MS0 1386 aa6.66□□□□□ -1.34
TRA2B-211ENST00000477939 SPTBN5Q9NRC6 3674 aaKnown RBP6.66□□□□□ -1.34
TRA2B-211ENST00000477939 MYH4Q9Y623 1939 aa6.66□□□□□ -1.34
TRA2B-211ENST00000477939 SMCHD1A6NHR9 2005 aa6.66□□□□□ -1.34
TRA2B-211ENST00000477939 TRIM64CA6NLI5 447 aa6.65□□□□□ -1.34
TRA2B-211ENST00000477939 DNM1LO00429 736 aa6.65□□□□□ -1.34
TRA2B-211ENST00000477939 WDR46O15213 610 aaKnown RBP6.65□□□□□ -1.34
TRA2B-211ENST00000477939 MSCO60682 206 aa6.65□□□□□ -1.34
TRA2B-211ENST00000477939 PPFIA3O75145 1194 aa6.65□□□□□ -1.34
TRA2B-211ENST00000477939 MTRF1O75570 445 aaKnown RBP6.65□□□□□ -1.34
TRA2B-211ENST00000477939 CPP00450 1065 aa6.65□□□□□ -1.34
TRA2B-211ENST00000477939 FAM163BP0C2L3 166 aa6.65□□□□□ -1.34
TRA2B-211ENST00000477939 CNGA1P29973 690 aa6.65□□□□□ -1.34
TRA2B-211ENST00000477939 DSG3P32926 999 aa6.65□□□□□ -1.34
TRA2B-211ENST00000477939 HNRNPH2P55795 449 aaKnown RBP6.65□□□□□ -1.34
TRA2B-211ENST00000477939 MDM2Q00987 491 aaPredicted RBP6.65□□□□□ -1.34
TRA2B-211ENST00000477939 ATP2B2Q01814 1243 aa6.65□□□□□ -1.34
TRA2B-211ENST00000477939 POSTNQ15063 836 aa6.65□□□□□ -1.34
TRA2B-211ENST00000477939 LRIT3Q3SXY7 679 aa6.65□□□□□ -1.34
TRA2B-211ENST00000477939 ANO1Q5XXA6 986 aa6.65□□□□□ -1.34
TRA2B-211ENST00000477939 TSHZ3Q63HK5 1081 aa6.65□□□□□ -1.34
TRA2B-211ENST00000477939 IQCEQ6IPM2 695 aa6.65□□□□□ -1.34
TRA2B-211ENST00000477939 Q7L0L9 218 aa6.65□□□□□ -1.34
TRA2B-211ENST00000477939 SPATS2Q86XZ4 545 aaKnown RBP6.65□□□□□ -1.34
TRA2B-211ENST00000477939 FAM114A1Q8IWE2 563 aa6.65□□□□□ -1.34
TRA2B-211ENST00000477939 STK11IPQ8N1F8 1099 aa6.65□□□□□ -1.34
TRA2B-211ENST00000477939 MYO1HQ8N1T3 1032 aa6.65□□□□□ -1.34
TRA2B-211ENST00000477939 MB21D1Q8N884 522 aa6.65□□□□□ -1.34
TRA2B-211ENST00000477939 DDX12PQ92771 950 aa6.65□□□□□ -1.34
TRA2B-211ENST00000477939 JAKMIP2Q96AA8 810 aa6.65□□□□□ -1.34
TRA2B-211ENST00000477939 CCDC17Q96LX7 622 aa6.65□□□□□ -1.34
TRA2B-211ENST00000477939 BAG1Q99933 345 aaPredicted RBP6.65□□□□□ -1.34
TRA2B-211ENST00000477939 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.65□□□□□ -1.34
TRA2B-211ENST00000477939 LRRCC1Q9C099 1032 aa6.65□□□□□ -1.34
TRA2B-211ENST00000477939 UBE2OQ9C0C9 1292 aaKnown RBP6.65□□□□□ -1.34
TRA2B-211ENST00000477939 SENP6Q9GZR1 1112 aaPredicted RBP6.65□□□□□ -1.34
TRA2B-211ENST00000477939 SH2D4AQ9H788 454 aa6.65□□□□□ -1.34
TRA2B-211ENST00000477939 NRDE2Q9H7Z3 1164 aa6.65□□□□□ -1.34
TRA2B-211ENST00000477939 FBXO28Q9NVF7 368 aa6.65□□□□□ -1.34
TRA2B-211ENST00000477939 ZNHIT6Q9NWK9 470 aaKnown RBP6.65□□□□□ -1.34
TRA2B-211ENST00000477939 HOXC10Q9NYD6 342 aa6.65□□□□□ -1.34
TRA2B-211ENST00000477939 KLHL42Q9P2K6 505 aa6.65□□□□□ -1.34
TRA2B-211ENST00000477939 CIZ1Q9ULV3 898 aaPredicted RBP6.65□□□□□ -1.34
TRA2B-211ENST00000477939 MCM3APO60318 1980 aa6.64□□□□□ -1.35
TRA2B-211ENST00000477939 A6NJR5 290 aa6.64□□□□□ -1.35
TRA2B-211ENST00000477939 TMEM110-MUSTN1A8MSY1 372 aa6.64□□□□□ -1.35
TRA2B-211ENST00000477939 SEPT4O43236 478 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms