RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 TMEM253P0C7T8 217 aa6.04□□□□□ -1.44
CKS1B-207ENST00000477676 HOXA5P20719 270 aa6.04□□□□□ -1.44
CKS1B-207ENST00000477676 MAP2K2P36507 400 aa6.04□□□□□ -1.44
CKS1B-207ENST00000477676 KIAA2012Q0VF49 1180 aa6.04□□□□□ -1.44
CKS1B-207ENST00000477676 NFE2L2Q16236 605 aa6.04□□□□□ -1.44
CKS1B-207ENST00000477676 KRT24Q2M2I5 525 aa6.04□□□□□ -1.44
CKS1B-207ENST00000477676 CIAPIN1Q6FI81 312 aa6.04□□□□□ -1.44
CKS1B-207ENST00000477676 PHLDB3Q6NSJ2 640 aa6.04□□□□□ -1.44
CKS1B-207ENST00000477676 DTHD1Q6ZMT9 781 aa6.04□□□□□ -1.44
CKS1B-207ENST00000477676 CYFIP1Q7L576 1253 aa6.04□□□□□ -1.44
CKS1B-207ENST00000477676 FAM214BQ7L5A3 538 aa6.04□□□□□ -1.44
CKS1B-207ENST00000477676 NIM1KQ8IY84 436 aa6.04□□□□□ -1.44
CKS1B-207ENST00000477676 TOP6BLQ8N6T0 577 aa6.04□□□□□ -1.44
CKS1B-207ENST00000477676 DIRC2Q96SL1 478 aa6.04□□□□□ -1.44
CKS1B-207ENST00000477676 ZC3H12CQ9C0D7 883 aaKnown RBP6.04□□□□□ -1.44
CKS1B-207ENST00000477676 KCNK12Q9HB15 430 aa6.04□□□□□ -1.44
CKS1B-207ENST00000477676 ZNRF3Q9ULT6 936 aa6.04□□□□□ -1.44
CKS1B-207ENST00000477676 NUDCQ9Y266 331 aa6.04□□□□□ -1.44
CKS1B-207ENST00000477676 A0A0C4DFX4 3053 aa6.04□□□□□ -1.44
CKS1B-207ENST00000477676 MYH3P11055 1940 aa6.03□□□□□ -1.44
CKS1B-207ENST00000477676 ASTN2O75129 1339 aaPredicted RBP6.03□□□□□ -1.44
CKS1B-207ENST00000477676 TMEM238LA0A1B0GVL6 79 aa6.03□□□□□ -1.44
CKS1B-207ENST00000477676 ZNF862O60290 1169 aa6.03□□□□□ -1.44
CKS1B-207ENST00000477676 ECE1P42892 770 aa6.03□□□□□ -1.44
CKS1B-207ENST00000477676 KCNA10Q16322 511 aa6.03□□□□□ -1.44
CKS1B-207ENST00000477676 KIF6Q6ZMV9 814 aa6.03□□□□□ -1.44
CKS1B-207ENST00000477676 USP48Q86UV5 1035 aa6.03□□□□□ -1.44
CKS1B-207ENST00000477676 NLRP10Q86W26 655 aa6.03□□□□□ -1.44
CKS1B-207ENST00000477676 SP8Q8IXZ3 490 aa6.03□□□□□ -1.44
CKS1B-207ENST00000477676 CCDC74AQ96AQ1 378 aa6.03□□□□□ -1.44
CKS1B-207ENST00000477676 EMILIN2Q9BXX0 1053 aa6.03□□□□□ -1.44
CKS1B-207ENST00000477676 TMEM39AQ9NV64 488 aa6.03□□□□□ -1.44
CKS1B-207ENST00000477676 GPN3Q9UHW5 284 aaPredicted RBP6.03□□□□□ -1.44
CKS1B-207ENST00000477676 SAMM50Q9Y512 469 aa6.03□□□□□ -1.44
CKS1B-207ENST00000477676 RTL9Q8NET4 1388 aa6.03□□□□□ -1.44
CKS1B-207ENST00000477676 PSMD14O00487 310 aa6.02□□□□□ -1.45
CKS1B-207ENST00000477676 EIF1AYO14602 144 aaKnown RBP6.02□□□□□ -1.45
CKS1B-207ENST00000477676 EIF2S2P20042 333 aaKnown RBP6.02□□□□□ -1.45
CKS1B-207ENST00000477676 PARP10Q53GL7 1025 aa6.02□□□□□ -1.45
CKS1B-207ENST00000477676 COPS6Q7L5N1 327 aa6.02□□□□□ -1.45
CKS1B-207ENST00000477676 PPP1R42Q7Z4L9 355 aa6.02□□□□□ -1.45
CKS1B-207ENST00000477676 SPACA3Q8IXA5 215 aa6.02□□□□□ -1.45
CKS1B-207ENST00000477676 RELTQ969Z4 430 aa6.02□□□□□ -1.45
CKS1B-207ENST00000477676 HHIPL1Q96JK4 782 aa6.02□□□□□ -1.45
CKS1B-207ENST00000477676 FAM129BQ96TA1 746 aa6.02□□□□□ -1.45
CKS1B-207ENST00000477676 UTP14AQ9BVJ6 771 aaKnown RBP6.02□□□□□ -1.45
CKS1B-207ENST00000477676 VPS33BQ9H267 617 aa6.02□□□□□ -1.45
CKS1B-207ENST00000477676 NSUN3Q9H649 340 aaKnown RBP6.02□□□□□ -1.45
CKS1B-207ENST00000477676 CD320Q9NPF0 282 aa6.02□□□□□ -1.45
CKS1B-207ENST00000477676 CNOT7Q9UIV1 285 aaKnown RBP6.02□□□□□ -1.45
CKS1B-207ENST00000477676 PCDHGC5Q9Y5F6 944 aa6.02□□□□□ -1.45
CKS1B-207ENST00000477676 CDHR2Q9BYE9 1310 aa6.01□□□□□ -1.45
CKS1B-207ENST00000477676 ADM5C9JUS6 153 aa6.01□□□□□ -1.45
CKS1B-207ENST00000477676 BBOX1O75936 387 aa6.01□□□□□ -1.45
CKS1B-207ENST00000477676 GSTP1P09211 210 aaKnown RBP6.01□□□□□ -1.45
CKS1B-207ENST00000477676 ZNF157P51786 506 aaPredicted RBP6.01□□□□□ -1.45
CKS1B-207ENST00000477676 HUNKP57058 714 aa6.01□□□□□ -1.45
CKS1B-207ENST00000477676 ORC1Q13415 861 aa6.01□□□□□ -1.45
CKS1B-207ENST00000477676 TCIRG1Q13488 830 aa6.01□□□□□ -1.45
CKS1B-207ENST00000477676 GRAPQ13588 217 aa6.01□□□□□ -1.45
CKS1B-207ENST00000477676 KIF4BQ2VIQ3 1234 aa6.01□□□□□ -1.45
CKS1B-207ENST00000477676 TBC1D10BQ4KMP7 808 aaPredicted RBP6.01□□□□□ -1.45
CKS1B-207ENST00000477676 DPP8Q6V1X1 898 aaPredicted RBP6.01□□□□□ -1.45
CKS1B-207ENST00000477676 ATG14Q6ZNE5 492 aa6.01□□□□□ -1.45
CKS1B-207ENST00000477676 GRAPLQ8TC17 118 aaPredicted RBP6.01□□□□□ -1.45
CKS1B-207ENST00000477676 PNISRQ8TF01 805 aaKnown RBP6.01□□□□□ -1.45
CKS1B-207ENST00000477676 XAGE3Q8WTP9 111 aa6.01□□□□□ -1.45
CKS1B-207ENST00000477676 CELF1Q92879 486 aaKnown RBP6.01□□□□□ -1.45
CKS1B-207ENST00000477676 ZNF408Q9H9D4 720 aa6.01□□□□□ -1.45
CKS1B-207ENST00000477676 DBNDD1Q9H9R9 158 aa6.01□□□□□ -1.45
CKS1B-207ENST00000477676 POLLQ9UGP5 575 aa6.01□□□□□ -1.45
CKS1B-207ENST00000477676 COL6A3P12111 3177 aa6.01□□□□□ -1.45
CKS1B-207ENST00000477676 LAMB1P07942 1786 aa6.01□□□□□ -1.45
CKS1B-207ENST00000477676 WTIPA6NIX2 430 aaPredicted RBP6□□□□□ -1.45
CKS1B-207ENST00000477676 NEFMP07197 916 aa6□□□□□ -1.45
CKS1B-207ENST00000477676 SERPINB4P48594 390 aa6□□□□□ -1.45
CKS1B-207ENST00000477676 GPSM2P81274 684 aa6□□□□□ -1.45
CKS1B-207ENST00000477676 KIF23Q02241 960 aaPredicted RBP6□□□□□ -1.45
CKS1B-207ENST00000477676 AIMP1Q12904 312 aaKnown RBP6□□□□□ -1.45
CKS1B-207ENST00000477676 NKPD1Q17RQ9 610 aa6□□□□□ -1.45
CKS1B-207ENST00000477676 CDC37L1Q7L3B6 337 aa6□□□□□ -1.45
CKS1B-207ENST00000477676 KCNB2Q92953 911 aa6□□□□□ -1.45
CKS1B-207ENST00000477676 ISCA1Q9BUE6 129 aa6□□□□□ -1.45
CKS1B-207ENST00000477676 BCL2L13Q9BXK5 485 aa6□□□□□ -1.45
CKS1B-207ENST00000477676 NIF3L1Q9GZT8 377 aa6□□□□□ -1.45
CKS1B-207ENST00000477676 ABCB6Q9NP58 842 aa6□□□□□ -1.45
CKS1B-207ENST00000477676 PICK1Q9NRD5 415 aa6□□□□□ -1.45
CKS1B-207ENST00000477676 C19orf73Q9NVV2 129 aa6□□□□□ -1.45
CKS1B-207ENST00000477676 TSPYL4Q9UJ04 414 aa6□□□□□ -1.45
CKS1B-207ENST00000477676 A0A1B0GUL6 1792 aa6□□□□□ -1.45
CKS1B-207ENST00000477676 ECM29Q5VYK3 1845 aa5.99□□□□□ -1.45
CKS1B-207ENST00000477676 LAMA3Q16787 3333 aa5.99□□□□□ -1.45
CKS1B-207ENST00000477676 PAPPA2Q9BXP8 1791 aa5.99□□□□□ -1.45
CKS1B-207ENST00000477676 IGF2BP3O00425 579 aaKnown RBP eCLIP5.99□□□□□ -1.45
CKS1B-207ENST00000477676 CA12O43570 354 aa5.99□□□□□ -1.45
CKS1B-207ENST00000477676 TMPOP42166 694 aaKnown RBP5.99□□□□□ -1.45
CKS1B-207ENST00000477676 SOX10P56693 466 aa5.99□□□□□ -1.45
CKS1B-207ENST00000477676 RIPK4P57078 832 aa5.99□□□□□ -1.45
CKS1B-207ENST00000477676 ARHGAP4P98171 946 aa5.99□□□□□ -1.45
CKS1B-207ENST00000477676 NOGQ13253 232 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms