RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 ARMCX2Q7L311 632 aa18.41■□□□□ 0.54
VHL-203ENST00000477538 VSIG10LQ86VR7 867 aa18.41■□□□□ 0.54
VHL-203ENST00000477538 MORC4Q8TE76 937 aa18.41■□□□□ 0.54
VHL-203ENST00000477538 ZFP91Q96JP5 570 aaPredicted RBP18.41■□□□□ 0.54
VHL-203ENST00000477538 NAP1L4Q99733 375 aaKnown RBP18.41■□□□□ 0.54
VHL-203ENST00000477538 WNT7AO00755 349 aa18.4■□□□□ 0.54
VHL-203ENST00000477538 CCNT1O60563 726 aaKnown RBP18.4■□□□□ 0.54
VHL-203ENST00000477538 TDP2O95551 362 aa18.4■□□□□ 0.54
VHL-203ENST00000477538 XRCC5P13010 732 aaKnown RBP18.4■□□□□ 0.54
VHL-203ENST00000477538 GCFC2P16383 781 aaKnown RBP18.4■□□□□ 0.54
VHL-203ENST00000477538 CIITAP33076 1130 aa18.4■□□□□ 0.54
VHL-203ENST00000477538 CTCFP49711 727 aaPredicted RBP18.4■□□□□ 0.54
VHL-203ENST00000477538 MRPS9P82933 396 aaKnown RBP18.4■□□□□ 0.54
VHL-203ENST00000477538 IRF5Q13568 498 aa18.4■□□□□ 0.54
VHL-203ENST00000477538 NBR1Q14596 966 aa18.4■□□□□ 0.54
VHL-203ENST00000477538 CCL14Q16627 93 aa18.4■□□□□ 0.54
VHL-203ENST00000477538 MOXD1Q6UVY6 613 aa18.4■□□□□ 0.54
VHL-203ENST00000477538 MAMDC4Q6UXC1 1216 aa18.4■□□□□ 0.54
VHL-203ENST00000477538 OTOP1Q7RTM1 612 aa18.4■□□□□ 0.54
VHL-203ENST00000477538 MSL3Q8N5Y2 521 aaKnown RBP18.4■□□□□ 0.54
VHL-203ENST00000477538 ZNF396Q96N95 335 aaPredicted RBP18.4■□□□□ 0.54
VHL-203ENST00000477538 TRIM17Q9Y577 477 aa18.4■□□□□ 0.54
VHL-203ENST00000477538 MYH9P35579 1960 aaKnown RBP18.4■□□□□ 0.54
VHL-203ENST00000477538 SYNGAP1Q96PV0 1343 aa18.4■□□□□ 0.54
VHL-203ENST00000477538 STAM2O75886 525 aa18.39■□□□□ 0.53
VHL-203ENST00000477538 PRMT2P55345 433 aa18.39■□□□□ 0.53
VHL-203ENST00000477538 OLFML2BQ68BL8 750 aa18.39■□□□□ 0.53
VHL-203ENST00000477538 PPP4R3AQ6IN85 833 aa18.39■□□□□ 0.53
VHL-203ENST00000477538 TINF2Q9BSI4 451 aa18.39■□□□□ 0.53
VHL-203ENST00000477538 RTEL1Q9NZ71 1219 aa18.39■□□□□ 0.53
VHL-203ENST00000477538 FLRT1Q9NZU1 646 aa18.39■□□□□ 0.53
VHL-203ENST00000477538 PCDHB6Q9Y5E3 794 aa18.39■□□□□ 0.53
VHL-203ENST00000477538 UBIAD1Q9Y5Z9 338 aa18.39■□□□□ 0.53
VHL-203ENST00000477538 FRMPD3Q5JV73 1810 aa18.39■□□□□ 0.53
VHL-203ENST00000477538 CYP3A7-CYP3A51PA0A087WV96 503 aa18.38■□□□□ 0.53
VHL-203ENST00000477538 FAM86B1E9PN63 330 aa18.38■□□□□ 0.53
VHL-203ENST00000477538 EIF3JO75822 258 aaKnown RBP18.38■□□□□ 0.53
VHL-203ENST00000477538 FAM86B2P0C5J1 330 aa18.38■□□□□ 0.53
VHL-203ENST00000477538 CYP3A7P24462 503 aa18.38■□□□□ 0.53
VHL-203ENST00000477538 MCM7P33993 719 aa18.38■□□□□ 0.53
VHL-203ENST00000477538 LBX1P52954 281 aa18.38■□□□□ 0.53
VHL-203ENST00000477538 DNM1Q05193 864 aaKnown RBP18.38■□□□□ 0.53
VHL-203ENST00000477538 ZNF174Q15697 407 aa18.38■□□□□ 0.53
VHL-203ENST00000477538 CEP55Q53EZ4 464 aa18.38■□□□□ 0.53
VHL-203ENST00000477538 PRR16Q569H4 304 aa18.38■□□□□ 0.53
VHL-203ENST00000477538 TRMT44Q8IYL2 757 aaKnown RBP18.38■□□□□ 0.53
VHL-203ENST00000477538 RAET1EQ8TD07 263 aa18.38■□□□□ 0.53
VHL-203ENST00000477538 MXRA8Q9BRK3 442 aa18.38■□□□□ 0.53
VHL-203ENST00000477538 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.38■□□□□ 0.53
VHL-203ENST00000477538 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.38■□□□□ 0.53
VHL-203ENST00000477538 DDX25Q9UHL0 483 aaKnown RBP18.38■□□□□ 0.53
VHL-203ENST00000477538 IGLV3-22A0A075B6J6 115 aa18.37■□□□□ 0.53
VHL-203ENST00000477538 SLC37A4O43826 429 aa18.37■□□□□ 0.53
VHL-203ENST00000477538 ITGB5P18084 799 aa18.37■□□□□ 0.53
VHL-203ENST00000477538 ORC2Q13416 577 aaPredicted RBP18.37■□□□□ 0.53
VHL-203ENST00000477538 ANO1Q5XXA6 986 aa18.37■□□□□ 0.53
VHL-203ENST00000477538 ATL3Q6DD88 541 aa18.37■□□□□ 0.53
VHL-203ENST00000477538 EEPD1Q7L9B9 569 aa18.37■□□□□ 0.53
VHL-203ENST00000477538 NIPA1Q7RTP0 329 aa18.37■□□□□ 0.53
VHL-203ENST00000477538 NLRX1Q86UT6 975 aa18.37■□□□□ 0.53
VHL-203ENST00000477538 PLA2G4DQ86XP0 818 aa18.37■□□□□ 0.53
VHL-203ENST00000477538 FBXO16Q8IX29 292 aaPredicted RBP18.37■□□□□ 0.53
VHL-203ENST00000477538 CYP2W1Q8TAV3 490 aa18.37■□□□□ 0.53
VHL-203ENST00000477538 TRIB2Q92519 343 aa18.37■□□□□ 0.53
VHL-203ENST00000477538 TNPO1Q92973 898 aaKnown RBP18.37■□□□□ 0.53
VHL-203ENST00000477538 MBOAT7Q96N66 472 aa18.37■□□□□ 0.53
VHL-203ENST00000477538 INPP4AQ96PE3 977 aaPredicted RBP18.37■□□□□ 0.53
VHL-203ENST00000477538 USP28Q96RU2 1077 aa18.37■□□□□ 0.53
VHL-203ENST00000477538 FTOQ9C0B1 505 aaKnown RBP eCLIP18.37■□□□□ 0.53
VHL-203ENST00000477538 TFIP11Q9UBB9 837 aaKnown RBP18.37■□□□□ 0.53
VHL-203ENST00000477538 MEIS1O00470 390 aa18.36■□□□□ 0.53
VHL-203ENST00000477538 ADCY3O60266 1144 aa18.36■□□□□ 0.53
VHL-203ENST00000477538 NEMFO60524 1076 aa18.36■□□□□ 0.53
VHL-203ENST00000477538 RGS20O76081 388 aa18.36■□□□□ 0.53
VHL-203ENST00000477538 SNAI1O95863 264 aaPredicted RBP18.36■□□□□ 0.53
VHL-203ENST00000477538 IGHA2P01877 340 aa18.36■□□□□ 0.53
VHL-203ENST00000477538 NCLP19338 710 aaKnown RBP18.36■□□□□ 0.53
VHL-203ENST00000477538 SETQ01105 290 aaPredicted RBP18.36■□□□□ 0.53
VHL-203ENST00000477538 CEBPZQ03701 1054 aaKnown RBP18.36■□□□□ 0.53
VHL-203ENST00000477538 SF3A1Q15459 793 aaKnown RBP18.36■□□□□ 0.53
VHL-203ENST00000477538 GNPTABQ3T906 1256 aa18.36■□□□□ 0.53
VHL-203ENST00000477538 Q4G0T1 1027 aa18.36■□□□□ 0.53
VHL-203ENST00000477538 POTEDQ86YR6 584 aa18.36■□□□□ 0.53
VHL-203ENST00000477538 GPRASP2Q96D09 838 aa18.36■□□□□ 0.53
VHL-203ENST00000477538 CHAMP1Q96JM3 812 aa18.36■□□□□ 0.53
VHL-203ENST00000477538 WDR11Q9BZH6 1224 aa18.36■□□□□ 0.53
VHL-203ENST00000477538 VTA1Q9NP79 307 aa18.36■□□□□ 0.53
VHL-203ENST00000477538 JADE2Q9NQC1 790 aa18.36■□□□□ 0.53
VHL-203ENST00000477538 CLIC4Q9Y696 253 aa18.36■□□□□ 0.53
VHL-203ENST00000477538 CYP2C19P33261 490 aa18.35■□□□□ 0.53
VHL-203ENST00000477538 KRT85P78386 507 aa18.35■□□□□ 0.53
VHL-203ENST00000477538 MTMR1Q13613 665 aa18.35■□□□□ 0.53
VHL-203ENST00000477538 MFSD14CQ5VZR4 134 aa18.35■□□□□ 0.53
VHL-203ENST00000477538 SEPT14Q6ZU15 432 aa18.35■□□□□ 0.53
VHL-203ENST00000477538 LENG9Q96B70 501 aa18.35■□□□□ 0.53
VHL-203ENST00000477538 ABHD16BQ9H3Z7 469 aa18.35■□□□□ 0.53
VHL-203ENST00000477538 POLR3EQ9NVU0 708 aa18.35■□□□□ 0.53
VHL-203ENST00000477538 CFAP45Q9UL16 551 aa18.35■□□□□ 0.53
VHL-203ENST00000477538 CEP131Q9UPN4 1083 aa18.35■□□□□ 0.53
VHL-203ENST00000477538 CNPY2Q9Y2B0 182 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms