RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 RBM28Q9NW13 759 aaKnown RBP16.87■□□□□ 0.29
CLSTN1-205ENST00000477264 GDAQ9Y2T3 454 aa16.87■□□□□ 0.29
CLSTN1-205ENST00000477264 PCDHA13Q9Y5I0 950 aa16.87■□□□□ 0.29
CLSTN1-205ENST00000477264 E7EVH7 732 aa16.86■□□□□ 0.29
CLSTN1-205ENST00000477264 IDH1O75874 414 aaKnown RBP16.86■□□□□ 0.29
CLSTN1-205ENST00000477264 GHRP10912 638 aa16.86■□□□□ 0.29
CLSTN1-205ENST00000477264 SCP2P22307 547 aa16.86■□□□□ 0.29
CLSTN1-205ENST00000477264 ARID4AP29374 1257 aaPredicted RBP16.86■□□□□ 0.29
CLSTN1-205ENST00000477264 SLC8A3P57103 927 aa16.86■□□□□ 0.29
CLSTN1-205ENST00000477264 SLC7A5Q01650 507 aa16.86■□□□□ 0.29
CLSTN1-205ENST00000477264 PTGDRQ13258 359 aa16.86■□□□□ 0.29
CLSTN1-205ENST00000477264 KCTD16Q68DU8 428 aa16.86■□□□□ 0.29
CLSTN1-205ENST00000477264 NACAP1Q9BZK3 213 aa16.86■□□□□ 0.29
CLSTN1-205ENST00000477264 ANKRD2Q9GZV1 360 aa16.86■□□□□ 0.29
CLSTN1-205ENST00000477264 PIH1D3Q9NQM4 214 aaKnown RBP16.86■□□□□ 0.29
CLSTN1-205ENST00000477264 A0A1B0GUL6 1792 aa16.86■□□□□ 0.29
CLSTN1-205ENST00000477264 FAM205CA6NFA0 338 aa16.85■□□□□ 0.29
CLSTN1-205ENST00000477264 C5orf60A6NFR6 353 aa16.85■□□□□ 0.29
CLSTN1-205ENST00000477264 SNAP23O00161 211 aa16.85■□□□□ 0.29
CLSTN1-205ENST00000477264 COBLO75128 1261 aa16.85■□□□□ 0.29
CLSTN1-205ENST00000477264 HSPA9P38646 679 aaKnown RBP16.85■□□□□ 0.29
CLSTN1-205ENST00000477264 PPARAQ07869 468 aa16.85■□□□□ 0.29
CLSTN1-205ENST00000477264 BIRC3Q13489 604 aa16.85■□□□□ 0.29
CLSTN1-205ENST00000477264 GRAPQ13588 217 aa16.85■□□□□ 0.29
CLSTN1-205ENST00000477264 UBE4AQ14139 1066 aa16.85■□□□□ 0.29
CLSTN1-205ENST00000477264 FKBP15Q5T1M5 1219 aa16.85■□□□□ 0.29
CLSTN1-205ENST00000477264 FUKQ8N0W3 1084 aa16.85■□□□□ 0.29
CLSTN1-205ENST00000477264 RNF10Q8N5U6 811 aaKnown RBP16.85■□□□□ 0.29
CLSTN1-205ENST00000477264 GRAPLQ8TC17 118 aaPredicted RBP16.85■□□□□ 0.29
CLSTN1-205ENST00000477264 MTRQ99707 1265 aa16.85■□□□□ 0.29
CLSTN1-205ENST00000477264 PLCB1Q9NQ66 1216 aa16.85■□□□□ 0.29
CLSTN1-205ENST00000477264 AGPAT5Q9NUQ2 364 aa16.85■□□□□ 0.29
CLSTN1-205ENST00000477264 B4DLN1 442 aa16.85■□□□□ 0.29
CLSTN1-205ENST00000477264 PHKA1P46020 1223 aa16.85■□□□□ 0.29
CLSTN1-205ENST00000477264 TBC1D8BQ0IIM8 1120 aa16.85■□□□□ 0.29
CLSTN1-205ENST00000477264 XRCC4Q13426 336 aa16.85■□□□□ 0.29
CLSTN1-205ENST00000477264 TTI2Q6NXR4 508 aa16.85■□□□□ 0.29
CLSTN1-205ENST00000477264 NFRKBQ6P4R8 1299 aa16.85■□□□□ 0.29
CLSTN1-205ENST00000477264 ZSCAN29Q8IWY8 852 aaPredicted RBP16.85■□□□□ 0.29
CLSTN1-205ENST00000477264 STAMQ92783 540 aa16.85■□□□□ 0.29
CLSTN1-205ENST00000477264 RBM17Q96I25 401 aaKnown RBP16.85■□□□□ 0.29
CLSTN1-205ENST00000477264 FAXDC2Q96IV6 333 aa16.85■□□□□ 0.29
CLSTN1-205ENST00000477264 CENPHQ9H3R5 247 aa16.85■□□□□ 0.29
CLSTN1-205ENST00000477264 TMBIM4Q9HC24 238 aa16.85■□□□□ 0.29
CLSTN1-205ENST00000477264 PLAGL2Q9UPG8 496 aa16.85■□□□□ 0.29
CLSTN1-205ENST00000477264 DUSP10Q9Y6W6 482 aa16.85■□□□□ 0.29
CLSTN1-205ENST00000477264 DNAJC8O75937 253 aaPredicted RBP16.84■□□□□ 0.29
CLSTN1-205ENST00000477264 RHOBTB3O94955 611 aa16.84■□□□□ 0.29
CLSTN1-205ENST00000477264 HEXIM1O94992 359 aaKnown RBP16.84■□□□□ 0.29
CLSTN1-205ENST00000477264 PAEPP09466 180 aa16.84■□□□□ 0.29
CLSTN1-205ENST00000477264 STAT6P42226 847 aa16.84■□□□□ 0.29
CLSTN1-205ENST00000477264 CRY2Q49AN0 593 aa16.84■□□□□ 0.29
CLSTN1-205ENST00000477264 ANKRD20A8PQ5CZ79 823 aa16.84■□□□□ 0.29
CLSTN1-205ENST00000477264 PIK3R5Q8WYR1 880 aa16.84■□□□□ 0.29
CLSTN1-205ENST00000477264 CCDC47Q96A33 483 aaKnown RBP16.84■□□□□ 0.29
CLSTN1-205ENST00000477264 UBAC1Q9BSL1 405 aa16.84■□□□□ 0.29
CLSTN1-205ENST00000477264 TRIM6Q9C030 488 aaPredicted RBP16.84■□□□□ 0.29
CLSTN1-205ENST00000477264 MAGEF1Q9HAY2 307 aa16.84■□□□□ 0.29
CLSTN1-205ENST00000477264 RBM12Q9NTZ6 932 aaKnown RBP16.84■□□□□ 0.29
CLSTN1-205ENST00000477264 GMNCA6NCL1 334 aa16.84■□□□□ 0.29
CLSTN1-205ENST00000477264 TRIM49BA6NDI0 452 aa16.84■□□□□ 0.29
CLSTN1-205ENST00000477264 MOCS3O95396 460 aa16.84■□□□□ 0.29
CLSTN1-205ENST00000477264 MMP10P09238 476 aa16.84■□□□□ 0.29
CLSTN1-205ENST00000477264 KIF11P52732 1056 aa16.84■□□□□ 0.29
CLSTN1-205ENST00000477264 CYP27A1Q02318 531 aa16.84■□□□□ 0.29
CLSTN1-205ENST00000477264 ZNF174Q15697 407 aa16.84■□□□□ 0.29
CLSTN1-205ENST00000477264 PKN1Q16512 942 aa16.84■□□□□ 0.29
CLSTN1-205ENST00000477264 RCSD1Q6JBY9 416 aa16.84■□□□□ 0.29
CLSTN1-205ENST00000477264 DEFB132Q7Z7B7 95 aa16.84■□□□□ 0.29
CLSTN1-205ENST00000477264 NUP133Q8WUM0 1156 aa16.84■□□□□ 0.29
CLSTN1-205ENST00000477264 BATF3Q9NR55 127 aa16.84■□□□□ 0.29
CLSTN1-205ENST00000477264 ZNF263O14978 683 aa16.83■□□□□ 0.28
CLSTN1-205ENST00000477264 BRD2P25440 801 aaKnown RBP16.83■□□□□ 0.28
CLSTN1-205ENST00000477264 MATR3P43243 847 aaKnown RBP eCLIP16.83■□□□□ 0.28
CLSTN1-205ENST00000477264 CLNS1AP54105 237 aaKnown RBP16.83■□□□□ 0.28
CLSTN1-205ENST00000477264 EARS2Q5JPH6 523 aaKnown RBP16.83■□□□□ 0.28
CLSTN1-205ENST00000477264 MSL1Q68DK7 614 aa16.83■□□□□ 0.28
CLSTN1-205ENST00000477264 TLDC1Q6P9B6 456 aa16.83■□□□□ 0.28
CLSTN1-205ENST00000477264 RUFY4Q6ZNE9 571 aa16.83■□□□□ 0.28
CLSTN1-205ENST00000477264 ARHGAP27Q6ZUM4 889 aa16.83■□□□□ 0.28
CLSTN1-205ENST00000477264 GIMAP8Q8ND71 665 aaPredicted RBP16.83■□□□□ 0.28
CLSTN1-205ENST00000477264 PCMTD1Q96MG8 357 aaPredicted RBP16.83■□□□□ 0.28
CLSTN1-205ENST00000477264 NOX5Q96PH1 765 aa16.83■□□□□ 0.28
CLSTN1-205ENST00000477264 DDX20Q9UHI6 824 aaKnown RBP16.83■□□□□ 0.28
CLSTN1-205ENST00000477264 NFU1Q9UMS0 254 aa16.83■□□□□ 0.28
CLSTN1-205ENST00000477264 QSER1Q2KHR3 1735 aa16.83■□□□□ 0.28
CLSTN1-205ENST00000477264 RASSF10A6NK89 507 aa16.82■□□□□ 0.28
CLSTN1-205ENST00000477264 TRAPPC3O43617 180 aa16.82■□□□□ 0.28
CLSTN1-205ENST00000477264 CALM1P0DP23 149 aa16.82■□□□□ 0.28
CLSTN1-205ENST00000477264 CALM2P0DP24 149 aa16.82■□□□□ 0.28
CLSTN1-205ENST00000477264 CALM3P0DP25 149 aa16.82■□□□□ 0.28
CLSTN1-205ENST00000477264 SLMAPQ14BN4 828 aa16.82■□□□□ 0.28
CLSTN1-205ENST00000477264 ZKSCAN8Q15776 578 aaPredicted RBP16.82■□□□□ 0.28
CLSTN1-205ENST00000477264 CAVIN4Q5BKX8 364 aa16.82■□□□□ 0.28
CLSTN1-205ENST00000477264 CACNA2D3Q8IZS8 1091 aa16.82■□□□□ 0.28
CLSTN1-205ENST00000477264 HOOK2Q96ED9 719 aa16.82■□□□□ 0.28
CLSTN1-205ENST00000477264 MLXIPQ9HAP2 919 aa16.82■□□□□ 0.28
CLSTN1-205ENST00000477264 GCOM1H8Y6P7 765 aaPredicted RBP16.82■□□□□ 0.28
CLSTN1-205ENST00000477264 MYZAPP0CAP1 466 aa16.82■□□□□ 0.28
CLSTN1-205ENST00000477264 CCNE1P24864 410 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms