RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 VAMP4O75379 141 aa4.95□□□□□ -1.62
XRN1-211ENST00000477237 APOBRQ0VD83 1088 aa4.95□□□□□ -1.62
XRN1-211ENST00000477237 PRKD1Q15139 912 aaPredicted RBP4.95□□□□□ -1.62
XRN1-211ENST00000477237 FAM126BQ8IXS8 530 aa4.95□□□□□ -1.62
XRN1-211ENST00000477237 DIS3Q9Y2L1 958 aaKnown RBP4.95□□□□□ -1.62
XRN1-211ENST00000477237 A0A087X1B8 175 aa4.94□□□□□ -1.62
XRN1-211ENST00000477237 C2orf71A6NGG8 1288 aa4.94□□□□□ -1.62
XRN1-211ENST00000477237 CBFA2T2O43439 604 aa4.94□□□□□ -1.62
XRN1-211ENST00000477237 FOXS1O43638 330 aa4.94□□□□□ -1.62
XRN1-211ENST00000477237 NPHS1O60500 1241 aa4.94□□□□□ -1.62
XRN1-211ENST00000477237 SORBS3O60504 671 aa4.94□□□□□ -1.62
XRN1-211ENST00000477237 SEPHS1P49903 392 aa4.94□□□□□ -1.62
XRN1-211ENST00000477237 DGCR2P98153 550 aa4.94□□□□□ -1.62
XRN1-211ENST00000477237 ZYXQ15942 572 aaKnown RBP4.94□□□□□ -1.62
XRN1-211ENST00000477237 DPY19L1Q2PZI1 675 aa4.94□□□□□ -1.62
XRN1-211ENST00000477237 KLHL36Q8N4N3 616 aa4.94□□□□□ -1.62
XRN1-211ENST00000477237 ADCY4Q8NFM4 1077 aa4.94□□□□□ -1.62
XRN1-211ENST00000477237 ZCCHC14Q8WYQ9 949 aaKnown RBP4.94□□□□□ -1.62
XRN1-211ENST00000477237 NAF1Q96HR8 494 aaKnown RBP4.94□□□□□ -1.62
XRN1-211ENST00000477237 GNRHR2Q96P88 292 aa4.94□□□□□ -1.62
XRN1-211ENST00000477237 AP5M1Q9H0R1 490 aa4.94□□□□□ -1.62
XRN1-211ENST00000477237 CSRNP2Q9H175 543 aa4.94□□□□□ -1.62
XRN1-211ENST00000477237 DLL4Q9NR61 685 aa4.94□□□□□ -1.62
XRN1-211ENST00000477237 NPHP3-ACAD11A0A0J9YXS1 232 aa4.93□□□□□ -1.62
XRN1-211ENST00000477237 PLSCR1O15162 318 aa4.93□□□□□ -1.62
XRN1-211ENST00000477237 PAMP19021 973 aa4.93□□□□□ -1.62
XRN1-211ENST00000477237 PTH1RQ03431 593 aa4.93□□□□□ -1.62
XRN1-211ENST00000477237 NFATC3Q12968 1075 aa4.93□□□□□ -1.62
XRN1-211ENST00000477237 USP39Q53GS9 565 aaKnown RBP4.93□□□□□ -1.62
XRN1-211ENST00000477237 HS1BP3Q53T59 392 aa4.93□□□□□ -1.62
XRN1-211ENST00000477237 SLITRK4Q8IW52 837 aa4.93□□□□□ -1.62
XRN1-211ENST00000477237 DPF3Q92784 378 aa4.93□□□□□ -1.62
XRN1-211ENST00000477237 EXTL1Q92935 676 aa4.93□□□□□ -1.62
XRN1-211ENST00000477237 NKD1Q969G9 470 aa4.93□□□□□ -1.62
XRN1-211ENST00000477237 ADOQ96SZ5 270 aa4.93□□□□□ -1.62
XRN1-211ENST00000477237 MARCH2Q9P0N8 246 aa4.93□□□□□ -1.62
XRN1-211ENST00000477237 VTI1BQ9UEU0 232 aa4.93□□□□□ -1.62
XRN1-211ENST00000477237 ZDHHC9Q9Y397 364 aa4.93□□□□□ -1.62
XRN1-211ENST00000477237 BACE2Q9Y5Z0 518 aa4.93□□□□□ -1.62
XRN1-211ENST00000477237 CNOT4O95628 575 aaKnown RBP4.92□□□□□ -1.62
XRN1-211ENST00000477237 MCM7P33993 719 aa4.92□□□□□ -1.62
XRN1-211ENST00000477237 INHBCP55103 352 aa4.92□□□□□ -1.62
XRN1-211ENST00000477237 NKX3-2P78367 333 aa4.92□□□□□ -1.62
XRN1-211ENST00000477237 LSM12Q3MHD2 195 aaKnown RBP4.92□□□□□ -1.62
XRN1-211ENST00000477237 MBLAC2Q68D91 279 aa4.92□□□□□ -1.62
XRN1-211ENST00000477237 TCTN3Q6NUS6 607 aa4.92□□□□□ -1.62
XRN1-211ENST00000477237 MILR1Q7Z6M3 343 aa4.92□□□□□ -1.62
XRN1-211ENST00000477237 TAB3Q8N5C8 712 aaPredicted RBP4.92□□□□□ -1.62
XRN1-211ENST00000477237 SEC14L1Q92503 715 aa4.92□□□□□ -1.62
XRN1-211ENST00000477237 TCEAL1Q15170 157 aa4.91□□□□□ -1.62
XRN1-211ENST00000477237 UNC5AQ6ZN44 842 aa4.91□□□□□ -1.62
XRN1-211ENST00000477237 TEX2Q8IWB9 1127 aa4.91□□□□□ -1.62
XRN1-211ENST00000477237 NEU4Q8WWR8 484 aaPredicted RBP4.91□□□□□ -1.62
XRN1-211ENST00000477237 CRAMP1Q96RY5 1269 aa4.91□□□□□ -1.62
XRN1-211ENST00000477237 NGRNQ9NPE2 291 aaKnown RBP4.91□□□□□ -1.62
XRN1-211ENST00000477237 CROTQ9UKG9 612 aa4.91□□□□□ -1.62
XRN1-211ENST00000477237 PPFIA2O75334 1257 aa4.9□□□□□ -1.63
XRN1-211ENST00000477237 ZG16BQ96DA0 208 aa4.9□□□□□ -1.63
XRN1-211ENST00000477237 CLIC6Q96NY7 704 aa4.9□□□□□ -1.63
XRN1-211ENST00000477237 WHRNQ9P202 907 aa4.9□□□□□ -1.63
XRN1-211ENST00000477237 FTSJ1Q9UET6 329 aa4.9□□□□□ -1.63
XRN1-211ENST00000477237 ZNF214Q9UL59 606 aaPredicted RBP4.9□□□□□ -1.63
XRN1-211ENST00000477237 ZNRF3Q9ULT6 936 aa4.9□□□□□ -1.63
XRN1-211ENST00000477237 TRBV23OR9-2A0A075B6M9 112 aa4.89□□□□□ -1.63
XRN1-211ENST00000477237 C22orf46C9J442 243 aa4.89□□□□□ -1.63
XRN1-211ENST00000477237 THBDP07204 575 aa4.89□□□□□ -1.63
XRN1-211ENST00000477237 LMO1P25800 156 aa4.89□□□□□ -1.63
XRN1-211ENST00000477237 SLC6A11P48066 632 aa4.89□□□□□ -1.63
XRN1-211ENST00000477237 LDLRAD3Q86YD5 345 aa4.89□□□□□ -1.63
XRN1-211ENST00000477237 VOPP1Q96AW1 172 aa4.89□□□□□ -1.63
XRN1-211ENST00000477237 TM9SF2Q99805 663 aa4.89□□□□□ -1.63
XRN1-211ENST00000477237 NT5C1AQ9BXI3 368 aa4.89□□□□□ -1.63
XRN1-211ENST00000477237 SEC61A2Q9H9S3 476 aa4.89□□□□□ -1.63
XRN1-211ENST00000477237 BARX1Q9HBU1 254 aaPredicted RBP4.89□□□□□ -1.63
XRN1-211ENST00000477237 MRS2Q9HD23 443 aa4.89□□□□□ -1.63
XRN1-211ENST00000477237 BTG4Q9NY30 223 aa4.89□□□□□ -1.63
XRN1-211ENST00000477237 ADAM29Q9UKF5 820 aa4.89□□□□□ -1.63
XRN1-211ENST00000477237 WASF3Q9UPY6 502 aa4.89□□□□□ -1.63
XRN1-211ENST00000477237 AMPD2Q01433 879 aa4.88□□□□□ -1.63
XRN1-211ENST00000477237 KCNA1Q09470 495 aa4.88□□□□□ -1.63
XRN1-211ENST00000477237 AGBL4Q5VU57 503 aa4.88□□□□□ -1.63
XRN1-211ENST00000477237 DPY19L2P1Q6NXN4 242 aa4.88□□□□□ -1.63
XRN1-211ENST00000477237 TRMT10BQ6PF06 316 aaKnown RBP4.88□□□□□ -1.63
XRN1-211ENST00000477237 RUFY4Q6ZNE9 571 aa4.88□□□□□ -1.63
XRN1-211ENST00000477237 SCUBE1Q8IWY4 988 aa4.88□□□□□ -1.63
XRN1-211ENST00000477237 EDAQ92838 391 aa4.88□□□□□ -1.63
XRN1-211ENST00000477237 RNF34Q969K3 372 aa4.88□□□□□ -1.63
XRN1-211ENST00000477237 AGAP2Q99490 1192 aa4.88□□□□□ -1.63
XRN1-211ENST00000477237 HAUS7Q99871 368 aa4.88□□□□□ -1.63
XRN1-211ENST00000477237 YIPF4Q9BSR8 244 aa4.88□□□□□ -1.63
XRN1-211ENST00000477237 CLEC1BQ9P126 229 aa4.88□□□□□ -1.63
XRN1-211ENST00000477237 CYP7B1O75881 506 aa4.87□□□□□ -1.63
XRN1-211ENST00000477237 C1SP09871 688 aa4.87□□□□□ -1.63
XRN1-211ENST00000477237 COL6A1P12109 1028 aa4.87□□□□□ -1.63
XRN1-211ENST00000477237 ATXN1P54253 815 aaKnown RBP4.87□□□□□ -1.63
XRN1-211ENST00000477237 TAGLNQ01995 201 aaKnown RBP4.87□□□□□ -1.63
XRN1-211ENST00000477237 LRCH2Q5VUJ6 765 aa4.87□□□□□ -1.63
XRN1-211ENST00000477237 NUDT10Q8NFP7 164 aa4.87□□□□□ -1.63
XRN1-211ENST00000477237 NUDT11Q96G61 164 aa4.87□□□□□ -1.63
XRN1-211ENST00000477237 LRRC37BQ96QE4 947 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms