RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 PTCRAQ6ISU1 281 aaPredicted RBP13.41□□□□□ -0.26
LSM2-212ENST00000477182 POTEBQ6S5H4 581 aa13.41□□□□□ -0.26
LSM2-212ENST00000477182 ARMCX2Q7L311 632 aa13.41□□□□□ -0.26
LSM2-212ENST00000477182 DEFB128Q7Z7B8 93 aa13.41□□□□□ -0.26
LSM2-212ENST00000477182 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.41□□□□□ -0.26
LSM2-212ENST00000477182 ANKS1AQ92625 1134 aa13.41□□□□□ -0.26
LSM2-212ENST00000477182 AP5M1Q9H0R1 490 aa13.41□□□□□ -0.26
LSM2-212ENST00000477182 KAT14Q9H8E8 782 aa13.41□□□□□ -0.26
LSM2-212ENST00000477182 NYAP2Q9P242 653 aa13.41□□□□□ -0.26
LSM2-212ENST00000477182 BRPF3Q9ULD4 1205 aa13.41□□□□□ -0.26
LSM2-212ENST00000477182 NAP1L2Q9ULW6 460 aaPredicted RBP13.41□□□□□ -0.26
LSM2-212ENST00000477182 RBM19Q9Y4C8 960 aaKnown RBP13.41□□□□□ -0.26
LSM2-212ENST00000477182 GRIN2DO15399 1336 aa13.4□□□□□ -0.26
LSM2-212ENST00000477182 KCNA5P22460 613 aa13.4□□□□□ -0.26
LSM2-212ENST00000477182 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.4□□□□□ -0.26
LSM2-212ENST00000477182 TLK2Q86UE8 772 aa13.4□□□□□ -0.26
LSM2-212ENST00000477182 SGMS1Q86VZ5 419 aa13.4□□□□□ -0.26
LSM2-212ENST00000477182 RAB11FIP4Q86YS3 637 aa13.4□□□□□ -0.26
LSM2-212ENST00000477182 ANKRD35Q8N283 1001 aa13.4□□□□□ -0.26
LSM2-212ENST00000477182 TMTC2Q8N394 836 aa13.4□□□□□ -0.26
LSM2-212ENST00000477182 FBXO40Q9UH90 709 aa13.4□□□□□ -0.26
LSM2-212ENST00000477182 TPCN1Q9ULQ1 816 aa13.4□□□□□ -0.26
LSM2-212ENST00000477182 MTMR7Q9Y216 660 aa13.4□□□□□ -0.26
LSM2-212ENST00000477182 MYH6P13533 1939 aa13.4□□□□□ -0.26
LSM2-212ENST00000477182 SCN5AQ14524 2016 aa13.39□□□□□ -0.27
LSM2-212ENST00000477182 USP34Q70CQ2 3546 aa13.39□□□□□ -0.27
LSM2-212ENST00000477182 GRXCR2A6NFK2 248 aa13.39□□□□□ -0.27
LSM2-212ENST00000477182 ATP2A1O14983 1001 aa13.39□□□□□ -0.27
LSM2-212ENST00000477182 BAIAP3O94812 1187 aa13.39□□□□□ -0.27
LSM2-212ENST00000477182 ARHGEF15O94989 841 aa13.39□□□□□ -0.27
LSM2-212ENST00000477182 LARGE1O95461 756 aa13.39□□□□□ -0.27
LSM2-212ENST00000477182 IL9P15248 144 aa13.39□□□□□ -0.27
LSM2-212ENST00000477182 APOA5Q6Q788 366 aa13.39□□□□□ -0.27
LSM2-212ENST00000477182 CATIPQ7Z7H3 387 aa13.39□□□□□ -0.27
LSM2-212ENST00000477182 CCDC144CPQ8IYA2 1237 aa13.39□□□□□ -0.27
LSM2-212ENST00000477182 ZNF654Q8IZM8 581 aa13.39□□□□□ -0.27
LSM2-212ENST00000477182 PNMA1Q8ND90 353 aa13.39□□□□□ -0.27
LSM2-212ENST00000477182 MKL1Q969V6 931 aa13.39□□□□□ -0.27
LSM2-212ENST00000477182 CHMP4CQ96CF2 233 aa13.39□□□□□ -0.27
LSM2-212ENST00000477182 MYL10Q9BUA6 226 aa13.39□□□□□ -0.27
LSM2-212ENST00000477182 LIMCH1Q9UPQ0 1083 aa13.39□□□□□ -0.27
LSM2-212ENST00000477182 FAM50BQ9Y247 325 aa13.39□□□□□ -0.27
LSM2-212ENST00000477182 CTDP1Q9Y5B0 961 aaPredicted RBP13.39□□□□□ -0.27
LSM2-212ENST00000477182 SLC12A7Q9Y666 1083 aa13.39□□□□□ -0.27
LSM2-212ENST00000477182 GOLGA8BA8MQT2 603 aa13.38□□□□□ -0.27
LSM2-212ENST00000477182 ZBTB43O43298 467 aa13.38□□□□□ -0.27
LSM2-212ENST00000477182 RXRAP19793 462 aa13.38□□□□□ -0.27
LSM2-212ENST00000477182 MCM2P49736 904 aa13.38□□□□□ -0.27
LSM2-212ENST00000477182 PTPN5P54829 565 aa13.38□□□□□ -0.27
LSM2-212ENST00000477182 EVCP57679 992 aa13.38□□□□□ -0.27
LSM2-212ENST00000477182 STK3Q13188 491 aa13.38□□□□□ -0.27
LSM2-212ENST00000477182 FAM83BQ5T0W9 1011 aa13.38□□□□□ -0.27
LSM2-212ENST00000477182 SYNE3Q6ZMZ3 975 aa13.38□□□□□ -0.27
LSM2-212ENST00000477182 HFE2Q6ZVN8 426 aa13.38□□□□□ -0.27
LSM2-212ENST00000477182 MICU3Q86XE3 530 aa13.38□□□□□ -0.27
LSM2-212ENST00000477182 GDPD5Q8WTR4 605 aa13.38□□□□□ -0.27
LSM2-212ENST00000477182 SNX21Q969T3 373 aa13.38□□□□□ -0.27
LSM2-212ENST00000477182 PRRX2Q99811 253 aa13.38□□□□□ -0.27
LSM2-212ENST00000477182 SLF1Q9BQI6 1058 aa13.38□□□□□ -0.27
LSM2-212ENST00000477182 FTOQ9C0B1 505 aaKnown RBP eCLIP13.38□□□□□ -0.27
LSM2-212ENST00000477182 KATNBL1Q9H079 304 aa13.38□□□□□ -0.27
LSM2-212ENST00000477182 PRKAG3Q9UGI9 489 aa13.38□□□□□ -0.27
LSM2-212ENST00000477182 GNEQ9Y223 722 aaKnown RBP13.38□□□□□ -0.27
LSM2-212ENST00000477182 Q9Y3F1 56 aa13.38□□□□□ -0.27
LSM2-212ENST00000477182 RIPK3Q9Y572 518 aa13.38□□□□□ -0.27
LSM2-212ENST00000477182 ASTN1O14525 1302 aa13.38□□□□□ -0.27
LSM2-212ENST00000477182 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.37□□□□□ -0.27
LSM2-212ENST00000477182 RAD21O60216 631 aa13.37□□□□□ -0.27
LSM2-212ENST00000477182 DDAH1O94760 285 aa13.37□□□□□ -0.27
LSM2-212ENST00000477182 PDIA3P30101 505 aaKnown RBP13.37□□□□□ -0.27
LSM2-212ENST00000477182 ANP32AP39687 249 aaKnown RBP13.37□□□□□ -0.27
LSM2-212ENST00000477182 KCNJ6P48051 423 aa13.37□□□□□ -0.27
LSM2-212ENST00000477182 ME3Q16798 604 aa13.37□□□□□ -0.27
LSM2-212ENST00000477182 RASGRP2Q7LDG7 609 aa13.37□□□□□ -0.27
LSM2-212ENST00000477182 HSCBQ8IWL3 235 aa13.37□□□□□ -0.27
LSM2-212ENST00000477182 PRPF38AQ8NAV1 312 aaKnown RBP13.37□□□□□ -0.27
LSM2-212ENST00000477182 RETREG2Q8NC44 543 aa13.37□□□□□ -0.27
LSM2-212ENST00000477182 CHST13Q8NET6 341 aa13.37□□□□□ -0.27
LSM2-212ENST00000477182 ZNF274Q96GC6 653 aaPredicted RBP13.37□□□□□ -0.27
LSM2-212ENST00000477182 FGD4Q96M96 766 aa13.37□□□□□ -0.27
LSM2-212ENST00000477182 BAZ2BQ9UIF8 2168 aaKnown RBP13.37□□□□□ -0.27
LSM2-212ENST00000477182 CFAP54Q96N23 3096 aa13.36□□□□□ -0.27
LSM2-212ENST00000477182 ZDBF2Q9HCK1 2354 aa13.36□□□□□ -0.27
LSM2-212ENST00000477182 ASB14A6NK59 587 aa13.36□□□□□ -0.27
LSM2-212ENST00000477182 GOLGA8AA7E2F4 631 aa13.36□□□□□ -0.27
LSM2-212ENST00000477182 F5H6K3 240 aa13.36□□□□□ -0.27
LSM2-212ENST00000477182 PITPNM1O00562 1244 aa13.36□□□□□ -0.27
LSM2-212ENST00000477182 DYNC1LI2O43237 492 aaPredicted RBP13.36□□□□□ -0.27
LSM2-212ENST00000477182 ZBED4O75132 1171 aa13.36□□□□□ -0.27
LSM2-212ENST00000477182 NDUFB10O96000 172 aa13.36□□□□□ -0.27
LSM2-212ENST00000477182 CYP2C9P11712 490 aa13.36□□□□□ -0.27
LSM2-212ENST00000477182 SLC4A3P48751 1232 aa13.36□□□□□ -0.27
LSM2-212ENST00000477182 PSMC6P62333 389 aa13.36□□□□□ -0.27
LSM2-212ENST00000477182 CCT2P78371 535 aaKnown RBP13.36□□□□□ -0.27
LSM2-212ENST00000477182 KLRC3Q07444 240 aa13.36□□□□□ -0.27
LSM2-212ENST00000477182 TROAPQ12815 778 aa13.36□□□□□ -0.27
LSM2-212ENST00000477182 SLFN13Q68D06 897 aa13.36□□□□□ -0.27
LSM2-212ENST00000477182 NECAB1Q8N987 351 aa13.36□□□□□ -0.27
LSM2-212ENST00000477182 GMCL1P1Q8NEA9 526 aa13.36□□□□□ -0.27
LSM2-212ENST00000477182 TMX3Q96JJ7 454 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms