RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 UNCXA6NJT0 531 aa16.31■□□□□ 0.2
COL4A6-206ENST00000477085 CNMDO75829 334 aa16.31■□□□□ 0.2
COL4A6-206ENST00000477085 CELF2O95319 508 aaKnown RBP16.31■□□□□ 0.2
COL4A6-206ENST00000477085 STAT3P40763 770 aa16.31■□□□□ 0.2
COL4A6-206ENST00000477085 SPIRE1Q08AE8 756 aa16.31■□□□□ 0.2
COL4A6-206ENST00000477085 BAATQ14032 418 aaPredicted RBP16.31■□□□□ 0.2
COL4A6-206ENST00000477085 ECM1Q16610 540 aa16.31■□□□□ 0.2
COL4A6-206ENST00000477085 STX1AQ16623 288 aa16.31■□□□□ 0.2
COL4A6-206ENST00000477085 NT5DC1Q5TFE4 455 aa16.31■□□□□ 0.2
COL4A6-206ENST00000477085 PNMA5Q96PV4 448 aa16.31■□□□□ 0.2
COL4A6-206ENST00000477085 R3HDMLQ9H3Y0 253 aa16.31■□□□□ 0.2
COL4A6-206ENST00000477085 GBA2Q9HCG7 927 aaPredicted RBP16.31■□□□□ 0.2
COL4A6-206ENST00000477085 USP25Q9UHP3 1055 aa16.31■□□□□ 0.2
COL4A6-206ENST00000477085 FRMPD4Q14CM0 1322 aa16.3■□□□□ 0.2
COL4A6-206ENST00000477085 PLCG1P19174 1290 aa16.3■□□□□ 0.2
COL4A6-206ENST00000477085 GRB10Q13322 594 aa16.3■□□□□ 0.2
COL4A6-206ENST00000477085 PLS1Q14651 629 aa16.3■□□□□ 0.2
COL4A6-206ENST00000477085 ZRSR1Q15695 479 aaKnown RBP16.3■□□□□ 0.2
COL4A6-206ENST00000477085 RRAGBQ5VZM2 374 aa16.3■□□□□ 0.2
COL4A6-206ENST00000477085 KANK3Q6NY19 840 aa16.3■□□□□ 0.2
COL4A6-206ENST00000477085 NSMFQ6X4W1 530 aa16.3■□□□□ 0.2
COL4A6-206ENST00000477085 RNF207Q6ZRF8 634 aa16.3■□□□□ 0.2
COL4A6-206ENST00000477085 CEP57L1Q8IYX8 460 aa16.3■□□□□ 0.2
COL4A6-206ENST00000477085 MS4A4AQ96JQ5 239 aa16.3■□□□□ 0.2
COL4A6-206ENST00000477085 MAP3K20Q9NYL2 800 aaKnown RBP16.3■□□□□ 0.2
COL4A6-206ENST00000477085 MEIS1O00470 390 aa16.29■□□□□ 0.2
COL4A6-206ENST00000477085 TBX3O15119 743 aa16.29■□□□□ 0.2
COL4A6-206ENST00000477085 ARP10275 920 aa16.29■□□□□ 0.2
COL4A6-206ENST00000477085 ITGB5P18084 799 aa16.29■□□□□ 0.2
COL4A6-206ENST00000477085 ZNF76P36508 570 aa16.29■□□□□ 0.2
COL4A6-206ENST00000477085 TXLNAP40222 546 aa16.29■□□□□ 0.2
COL4A6-206ENST00000477085 NLRP12P59046 1061 aa16.29■□□□□ 0.2
COL4A6-206ENST00000477085 MRPS9P82933 396 aaKnown RBP16.29■□□□□ 0.2
COL4A6-206ENST00000477085 DPYDQ12882 1025 aa16.29■□□□□ 0.2
COL4A6-206ENST00000477085 TMEM266Q2M3C6 531 aa16.29■□□□□ 0.2
COL4A6-206ENST00000477085 CEP55Q53EZ4 464 aa16.29■□□□□ 0.2
COL4A6-206ENST00000477085 LUZP1Q86V48 1076 aa16.29■□□□□ 0.2
COL4A6-206ENST00000477085 SAMD3Q8N6K7 520 aa16.29■□□□□ 0.2
COL4A6-206ENST00000477085 FAM200AQ8TCP9 573 aa16.29■□□□□ 0.2
COL4A6-206ENST00000477085 MAN1B1Q9UKM7 699 aa16.29■□□□□ 0.2
COL4A6-206ENST00000477085 STAT6P42226 847 aa16.28■□□□□ 0.2
COL4A6-206ENST00000477085 ZNF165P49910 485 aa16.28■□□□□ 0.2
COL4A6-206ENST00000477085 HERVK_113P62684 666 aa16.28■□□□□ 0.2
COL4A6-206ENST00000477085 FKBP1BP68106 108 aa16.28■□□□□ 0.2
COL4A6-206ENST00000477085 SNAPC2Q13487 334 aa16.28■□□□□ 0.2
COL4A6-206ENST00000477085 CUL4BQ13620 913 aa16.28■□□□□ 0.2
COL4A6-206ENST00000477085 IQCB1Q15051 598 aa16.28■□□□□ 0.2
COL4A6-206ENST00000477085 FASTKD5Q7L8L6 764 aaKnown RBP16.28■□□□□ 0.2
COL4A6-206ENST00000477085 SLFN12Q8IYM2 578 aa16.28■□□□□ 0.2
COL4A6-206ENST00000477085 BLZF1Q9H2G9 400 aa16.28■□□□□ 0.2
COL4A6-206ENST00000477085 TXNRD2Q9NNW7 524 aa16.28■□□□□ 0.2
COL4A6-206ENST00000477085 ANO10Q9NW15 660 aa16.28■□□□□ 0.2
COL4A6-206ENST00000477085 VAV3Q9UKW4 847 aa16.28■□□□□ 0.2
COL4A6-206ENST00000477085 A0A0G2JMZ2 1700 aa16.28■□□□□ 0.2
COL4A6-206ENST00000477085 AP5Z1O43299 807 aa16.28■□□□□ 0.2
COL4A6-206ENST00000477085 MARCH6O60337 910 aa16.28■□□□□ 0.2
COL4A6-206ENST00000477085 EIF2AK2P19525 551 aaKnown RBP16.28■□□□□ 0.2
COL4A6-206ENST00000477085 IRX3P78415 501 aaPredicted RBP16.28■□□□□ 0.2
COL4A6-206ENST00000477085 MKRN3Q13064 507 aaKnown RBP16.28■□□□□ 0.2
COL4A6-206ENST00000477085 PLA2G4DQ86XP0 818 aa16.28■□□□□ 0.2
COL4A6-206ENST00000477085 FAM20AQ96MK3 541 aa16.28■□□□□ 0.2
COL4A6-206ENST00000477085 PYM1Q9BRP8 204 aaKnown RBP16.28■□□□□ 0.2
COL4A6-206ENST00000477085 A1CFQ9NQ94 594 aaKnown RBP16.28■□□□□ 0.2
COL4A6-206ENST00000477085 PXMP2Q9NR77 195 aa16.28■□□□□ 0.2
COL4A6-206ENST00000477085 CYP39A1Q9NYL5 469 aa16.28■□□□□ 0.2
COL4A6-206ENST00000477085 RBPJLQ9UBG7 517 aa16.28■□□□□ 0.2
COL4A6-206ENST00000477085 CCDC39Q9UFE4 941 aa16.28■□□□□ 0.2
COL4A6-206ENST00000477085 PGM5Q15124 567 aa16.27■□□□□ 0.2
COL4A6-206ENST00000477085 Q3C1V9 767 aa16.27■□□□□ 0.2
COL4A6-206ENST00000477085 TKFCQ3LXA3 575 aa16.27■□□□□ 0.2
COL4A6-206ENST00000477085 PCNX4Q63HM2 1172 aa16.27■□□□□ 0.2
COL4A6-206ENST00000477085 KCNK18Q7Z418 384 aa16.27■□□□□ 0.2
COL4A6-206ENST00000477085 DHX40Q8IX18 779 aaKnown RBP16.27■□□□□ 0.2
COL4A6-206ENST00000477085 C2orf69Q8N8R5 385 aa16.27■□□□□ 0.2
COL4A6-206ENST00000477085 RMDN3Q96TC7 470 aa16.27■□□□□ 0.2
COL4A6-206ENST00000477085 MXRA8Q9BRK3 442 aa16.27■□□□□ 0.2
COL4A6-206ENST00000477085 ACAD9Q9H845 621 aa16.27■□□□□ 0.2
COL4A6-206ENST00000477085 EHMT1Q9H9B1 1298 aa16.27■□□□□ 0.2
COL4A6-206ENST00000477085 BLOC1S4Q9NUP1 217 aa16.27■□□□□ 0.2
COL4A6-206ENST00000477085 KBTBD4Q9NVX7 518 aa16.27■□□□□ 0.2
COL4A6-206ENST00000477085 HOOK1Q9UJC3 728 aaKnown RBP16.27■□□□□ 0.2
COL4A6-206ENST00000477085 MORC3Q14149 939 aa16.26■□□□□ 0.19
COL4A6-206ENST00000477085 TMEM119Q4V9L6 283 aa16.26■□□□□ 0.19
COL4A6-206ENST00000477085 CHADLQ6NUI6 762 aa16.26■□□□□ 0.19
COL4A6-206ENST00000477085 RIOX2Q8IUF8 465 aa16.26■□□□□ 0.19
COL4A6-206ENST00000477085 MB21D1Q8N884 522 aa16.26■□□□□ 0.19
COL4A6-206ENST00000477085 SNX29Q8TEQ0 813 aa16.26■□□□□ 0.19
COL4A6-206ENST00000477085 SLC5A5Q92911 643 aa16.26■□□□□ 0.19
COL4A6-206ENST00000477085 SMARCE1Q969G3 411 aa16.26■□□□□ 0.19
COL4A6-206ENST00000477085 PDCD2LQ9BRP1 358 aa16.26■□□□□ 0.19
COL4A6-206ENST00000477085 RAB34Q9BZG1 259 aa16.26■□□□□ 0.19
COL4A6-206ENST00000477085 WDR11Q9BZH6 1224 aa16.26■□□□□ 0.19
COL4A6-206ENST00000477085 SPATC1LQ9H0A9 340 aa16.26■□□□□ 0.19
COL4A6-206ENST00000477085 UBIAD1Q9Y5Z9 338 aa16.26■□□□□ 0.19
COL4A6-206ENST00000477085 EML1O00423 815 aa16.26■□□□□ 0.19
COL4A6-206ENST00000477085 PSMD10O75832 226 aa16.26■□□□□ 0.19
COL4A6-206ENST00000477085 UVSSAQ2YD98 709 aa16.26■□□□□ 0.19
COL4A6-206ENST00000477085 HYIQ5T013 277 aa16.26■□□□□ 0.19
COL4A6-206ENST00000477085 KRT79Q5XKE5 535 aa16.26■□□□□ 0.19
COL4A6-206ENST00000477085 OTOP1Q7RTM1 612 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms