RNA–Protein interactions for RNA: ENST00000476953.6

PHF11-208, Transcript of PHD finger protein 11, humanhuman

TSL 5

Gene PHF11, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF11-208ENST00000476953 GBF1Q92538 1859 aa23.35■■□□□ 1.33
PHF11-208ENST00000476953 TRIP12Q14669 1992 aaPredicted RBP23.35■■□□□ 1.33
PHF11-208ENST00000476953 MMP3P08254 477 aa23.35■■□□□ 1.33
PHF11-208ENST00000476953 KCNB2Q92953 911 aa23.35■■□□□ 1.33
PHF11-208ENST00000476953 DDX41Q9UJV9 622 aaKnown RBP23.35■■□□□ 1.33
PHF11-208ENST00000476953 FRMPD4Q14CM0 1322 aa23.34■■□□□ 1.33
PHF11-208ENST00000476953 CNTNAP5Q8WYK1 1306 aa23.34■■□□□ 1.33
PHF11-208ENST00000476953 TLR3O15455 904 aaKnown RBP23.34■■□□□ 1.33
PHF11-208ENST00000476953 SORBS3O60504 671 aa23.34■■□□□ 1.33
PHF11-208ENST00000476953 EIF3JO75822 258 aaKnown RBP23.34■■□□□ 1.33
PHF11-208ENST00000476953 SMARCA1P28370 1054 aa23.34■■□□□ 1.33
PHF11-208ENST00000476953 CYP2C18P33260 490 aa23.34■■□□□ 1.33
PHF11-208ENST00000476953 MFSD5Q6N075 450 aa23.34■■□□□ 1.33
PHF11-208ENST00000476953 USP17L6PQ6QN14 398 aa23.34■■□□□ 1.33
PHF11-208ENST00000476953 DHX32Q7L7V1 743 aaKnown RBP23.34■■□□□ 1.33
PHF11-208ENST00000476953 SAMD3Q8N6K7 520 aa23.34■■□□□ 1.33
PHF11-208ENST00000476953 FANCBQ8NB91 859 aa23.34■■□□□ 1.33
PHF11-208ENST00000476953 MTG1Q9BT17 334 aaPredicted RBP23.34■■□□□ 1.33
PHF11-208ENST00000476953 ALDH8A1Q9H2A2 487 aaPredicted RBP23.34■■□□□ 1.33
PHF11-208ENST00000476953 TRMT13Q9NUP7 481 aaKnown RBP23.34■■□□□ 1.33
PHF11-208ENST00000476953 SNX14Q9Y5W7 946 aa23.34■■□□□ 1.33
PHF11-208ENST00000476953 MEIS2O14770 477 aa23.33■■□□□ 1.33
PHF11-208ENST00000476953 GH1P01241 217 aa23.33■■□□□ 1.33
PHF11-208ENST00000476953 CALM1P0DP23 149 aa23.33■■□□□ 1.33
PHF11-208ENST00000476953 CALM2P0DP24 149 aa23.33■■□□□ 1.33
PHF11-208ENST00000476953 CALM3P0DP25 149 aa23.33■■□□□ 1.33
PHF11-208ENST00000476953 CSF2RAP15509 400 aa23.33■■□□□ 1.33
PHF11-208ENST00000476953 HSPA4P34932 840 aa23.33■■□□□ 1.33
PHF11-208ENST00000476953 NBPF20Q3BBV1 942 aa23.33■■□□□ 1.33
PHF11-208ENST00000476953 C16orf59Q7L2K0 433 aa23.33■■□□□ 1.33
PHF11-208ENST00000476953 VSIG10LQ86VR7 867 aa23.33■■□□□ 1.33
PHF11-208ENST00000476953 LZTS2Q9BRK4 669 aa23.33■■□□□ 1.33
PHF11-208ENST00000476953 MRVI1Q9Y6F6 885 aa23.33■■□□□ 1.33
PHF11-208ENST00000476953 COL6A3P12111 3177 aa23.32■■□□□ 1.32
PHF11-208ENST00000476953 GNAQP50148 359 aa23.32■■□□□ 1.32
PHF11-208ENST00000476953 MRPS9P82933 396 aaKnown RBP23.32■■□□□ 1.32
PHF11-208ENST00000476953 SP2Q02086 613 aa23.32■■□□□ 1.32
PHF11-208ENST00000476953 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.32■■□□□ 1.32
PHF11-208ENST00000476953 BCAS3Q9H6U6 928 aa23.32■■□□□ 1.32
PHF11-208ENST00000476953 SEC63Q9UGP8 760 aaKnown RBP23.32■■□□□ 1.32
PHF11-208ENST00000476953 RBAK-RBAKDNI3L0D1 243 aa23.31■■□□□ 1.32
PHF11-208ENST00000476953 CYP2C9P11712 490 aa23.31■■□□□ 1.32
PHF11-208ENST00000476953 FUT2Q10981 343 aa23.31■■□□□ 1.32
PHF11-208ENST00000476953 TRAF1Q13077 416 aa23.31■■□□□ 1.32
PHF11-208ENST00000476953 KAT2BQ92831 832 aa23.31■■□□□ 1.32
PHF11-208ENST00000476953 NOC4LQ9BVI4 516 aaKnown RBP23.31■■□□□ 1.32
PHF11-208ENST00000476953 WNT8AQ9H1J5 351 aa23.31■■□□□ 1.32
PHF11-208ENST00000476953 HIPK3Q9H422 1215 aa23.31■■□□□ 1.32
PHF11-208ENST00000476953 FAM217BQ9NTX9 383 aaPredicted RBP23.31■■□□□ 1.32
PHF11-208ENST00000476953 ACRP10323 421 aa23.3■■□□□ 1.32
PHF11-208ENST00000476953 UBA1P22314 1058 aaKnown RBP23.3■■□□□ 1.32
PHF11-208ENST00000476953 CCND2P30279 289 aa23.3■■□□□ 1.32
PHF11-208ENST00000476953 SEMA3FQ13275 785 aa23.3■■□□□ 1.32
PHF11-208ENST00000476953 KRT32Q14532 448 aa23.3■■□□□ 1.32
PHF11-208ENST00000476953 GPR153Q6NV75 609 aa23.3■■□□□ 1.32
PHF11-208ENST00000476953 DEFB123Q8N688 67 aa23.3■■□□□ 1.32
PHF11-208ENST00000476953 RNPC3Q96LT9 517 aaKnown RBP23.3■■□□□ 1.32
PHF11-208ENST00000476953 JAKMIP1Q96N16 626 aaKnown RBP23.3■■□□□ 1.32
PHF11-208ENST00000476953 KLF18A0A0U1RQI7 1052 aa23.29■■□□□ 1.32
PHF11-208ENST00000476953 CDC27P30260 824 aa23.29■■□□□ 1.32
PHF11-208ENST00000476953 CCL23P55773 120 aa23.29■■□□□ 1.32
PHF11-208ENST00000476953 CHMP4BP1P59074 171 aa23.29■■□□□ 1.32
PHF11-208ENST00000476953 UBE2SQ16763 222 aa23.29■■□□□ 1.32
PHF11-208ENST00000476953 BRDTQ58F21 947 aaPredicted RBP23.29■■□□□ 1.32
PHF11-208ENST00000476953 FAM47CQ5HY64 1035 aa23.29■■□□□ 1.32
PHF11-208ENST00000476953 TYW1BQ6NUM6 668 aa23.29■■□□□ 1.32
PHF11-208ENST00000476953 SMARCC2Q8TAQ2 1214 aa23.29■■□□□ 1.32
PHF11-208ENST00000476953 EMID1Q96A84 441 aaPredicted RBP23.29■■□□□ 1.32
PHF11-208ENST00000476953 VWCEQ96DN2 955 aa23.29■■□□□ 1.32
PHF11-208ENST00000476953 CDH23Q9H251 3354 aa23.29■■□□□ 1.32
PHF11-208ENST00000476953 ZBTB43O43298 467 aa23.28■■□□□ 1.32
PHF11-208ENST00000476953 GGPS1O95749 300 aa23.28■■□□□ 1.32
PHF11-208ENST00000476953 ZNF286BP0CG31 522 aa23.28■■□□□ 1.32
PHF11-208ENST00000476953 APOBRQ0VD83 1088 aa23.28■■□□□ 1.32
PHF11-208ENST00000476953 RTN1Q16799 776 aa23.28■■□□□ 1.32
PHF11-208ENST00000476953 TMEM240Q5SV17 173 aa23.28■■□□□ 1.32
PHF11-208ENST00000476953 WWC2Q6AWC2 1192 aa23.28■■□□□ 1.32
PHF11-208ENST00000476953 FAM109BQ6ICB4 259 aaPredicted RBP23.28■■□□□ 1.32
PHF11-208ENST00000476953 TET1Q8NFU7 2136 aa23.28■■□□□ 1.32
PHF11-208ENST00000476953 RTEL1Q9NZ71 1219 aa23.28■■□□□ 1.32
PHF11-208ENST00000476953 GOLGA8AA7E2F4 631 aa23.27■■□□□ 1.32
PHF11-208ENST00000476953 GOLGA8BA8MQT2 603 aa23.27■■□□□ 1.32
PHF11-208ENST00000476953 PIK3CDO00329 1044 aa23.27■■□□□ 1.32
PHF11-208ENST00000476953 PPIGQ13427 754 aaKnown RBP eCLIP23.27■■□□□ 1.32
PHF11-208ENST00000476953 HSDL1Q3SXM5 330 aa23.27■■□□□ 1.32
PHF11-208ENST00000476953 MYSM1Q5VVJ2 828 aa23.27■■□□□ 1.32
PHF11-208ENST00000476953 Q6ZUG5 572 aa23.27■■□□□ 1.32
PHF11-208ENST00000476953 DHX37Q8IY37 1157 aaKnown RBP23.27■■□□□ 1.32
PHF11-208ENST00000476953 TMEM199Q8N511 208 aa23.27■■□□□ 1.32
PHF11-208ENST00000476953 PPTC7Q8NI37 304 aa23.27■■□□□ 1.32
PHF11-208ENST00000476953 SCLYQ96I15 445 aa23.27■■□□□ 1.32
PHF11-208ENST00000476953 INPP4AQ96PE3 977 aaPredicted RBP23.27■■□□□ 1.32
PHF11-208ENST00000476953 CTAGE1Q96RT6 745 aa23.27■■□□□ 1.32
PHF11-208ENST00000476953 SEZ6LQ9BYH1 1024 aa23.27■■□□□ 1.32
PHF11-208ENST00000476953 PPP4R2Q9NY27 417 aa23.27■■□□□ 1.32
PHF11-208ENST00000476953 TELO2Q9Y4R8 837 aa23.27■■□□□ 1.32
PHF11-208ENST00000476953 KPNA6O60684 536 aa23.26■■□□□ 1.31
PHF11-208ENST00000476953 CELF3Q5SZQ8 465 aaKnown RBP23.26■■□□□ 1.31
PHF11-208ENST00000476953 NFRKBQ6P4R8 1299 aa23.26■■□□□ 1.31
PHF11-208ENST00000476953 SYNE3Q6ZMZ3 975 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms