RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 ANO2Q9NQ90 1003 aa12.51□□□□□ -0.41
SEC13-214ENST00000476597 CHD9Q3L8U1 2897 aa12.5□□□□□ -0.41
SEC13-214ENST00000476597 CDH23Q9H251 3354 aa12.5□□□□□ -0.41
SEC13-214ENST00000476597 FGBP02675 491 aa12.5□□□□□ -0.41
SEC13-214ENST00000476597 MMP3P08254 477 aa12.5□□□□□ -0.41
SEC13-214ENST00000476597 CYP2C9P11712 490 aa12.5□□□□□ -0.41
SEC13-214ENST00000476597 MYCLP12524 364 aaPredicted RBP12.5□□□□□ -0.41
SEC13-214ENST00000476597 KIF5BP33176 963 aa12.5□□□□□ -0.41
SEC13-214ENST00000476597 PGM5Q15124 567 aa12.5□□□□□ -0.41
SEC13-214ENST00000476597 PSRC1Q6PGN9 363 aaPredicted RBP12.5□□□□□ -0.41
SEC13-214ENST00000476597 SLC17A8Q8NDX2 589 aa12.5□□□□□ -0.41
SEC13-214ENST00000476597 CTCFLQ8NI51 663 aaPredicted RBP12.5□□□□□ -0.41
SEC13-214ENST00000476597 HERVK_113Q902F9 699 aa12.5□□□□□ -0.41
SEC13-214ENST00000476597 VWCEQ96DN2 955 aa12.5□□□□□ -0.41
SEC13-214ENST00000476597 MYL10Q9BUA6 226 aa12.5□□□□□ -0.41
SEC13-214ENST00000476597 SPZ1Q9BXG8 430 aa12.5□□□□□ -0.41
SEC13-214ENST00000476597 WNT8AQ9H1J5 351 aa12.5□□□□□ -0.41
SEC13-214ENST00000476597 TTYH1Q9H313 450 aaPredicted RBP12.5□□□□□ -0.41
SEC13-214ENST00000476597 MRVI1Q9Y6F6 885 aa12.5□□□□□ -0.41
SEC13-214ENST00000476597 LRRC37A2A6NM11 1700 aa12.49□□□□□ -0.41
SEC13-214ENST00000476597 TMEM265A0A087WTH1 108 aa12.49□□□□□ -0.41
SEC13-214ENST00000476597 CCDC69A6NI79 296 aa12.49□□□□□ -0.41
SEC13-214ENST00000476597 CASTP20810 708 aaKnown RBP12.49□□□□□ -0.41
SEC13-214ENST00000476597 GNAQP50148 359 aa12.49□□□□□ -0.41
SEC13-214ENST00000476597 LAMC2Q13753 1193 aa12.49□□□□□ -0.41
SEC13-214ENST00000476597 FAM47CQ5HY64 1035 aa12.49□□□□□ -0.41
SEC13-214ENST00000476597 KCNV1Q6PIU1 500 aa12.49□□□□□ -0.41
SEC13-214ENST00000476597 NFXL1Q6ZNB6 911 aa12.49□□□□□ -0.41
SEC13-214ENST00000476597 RPUSD2Q8IZ73 545 aaKnown RBP12.49□□□□□ -0.41
SEC13-214ENST00000476597 SRBD1Q8N5C6 995 aaKnown RBP12.49□□□□□ -0.41
SEC13-214ENST00000476597 PPP1R13LQ8WUF5 828 aa12.49□□□□□ -0.41
SEC13-214ENST00000476597 PIBF1Q8WXW3 757 aa12.49□□□□□ -0.41
SEC13-214ENST00000476597 KAT2BQ92831 832 aa12.49□□□□□ -0.41
SEC13-214ENST00000476597 RRP36Q96EU6 259 aaKnown RBP12.49□□□□□ -0.41
SEC13-214ENST00000476597 CDX2Q99626 313 aaPredicted RBP12.49□□□□□ -0.41
SEC13-214ENST00000476597 PPFIA4O75335 1185 aa12.48□□□□□ -0.41
SEC13-214ENST00000476597 PLEKHA8P1O95397 391 aa12.48□□□□□ -0.41
SEC13-214ENST00000476597 CALM1P0DP23 149 aa12.48□□□□□ -0.41
SEC13-214ENST00000476597 CALM2P0DP24 149 aa12.48□□□□□ -0.41
SEC13-214ENST00000476597 CALM3P0DP25 149 aa12.48□□□□□ -0.41
SEC13-214ENST00000476597 TGFB3P10600 412 aa12.48□□□□□ -0.41
SEC13-214ENST00000476597 CCND2P30279 289 aa12.48□□□□□ -0.41
SEC13-214ENST00000476597 SP2Q02086 613 aa12.48□□□□□ -0.41
SEC13-214ENST00000476597 DGKDQ16760 1214 aa12.48□□□□□ -0.41
SEC13-214ENST00000476597 TSGA10IPQ3SY00 556 aa12.48□□□□□ -0.41
SEC13-214ENST00000476597 RNF20Q5VTR2 975 aa12.48□□□□□ -0.41
SEC13-214ENST00000476597 MYSM1Q5VVJ2 828 aa12.48□□□□□ -0.41
SEC13-214ENST00000476597 FCHSD1Q86WN1 690 aa12.48□□□□□ -0.41
SEC13-214ENST00000476597 DHX37Q8IY37 1157 aaKnown RBP12.48□□□□□ -0.41
SEC13-214ENST00000476597 IL31RAQ8NI17 732 aa12.48□□□□□ -0.41
SEC13-214ENST00000476597 SCLYQ96I15 445 aa12.48□□□□□ -0.41
SEC13-214ENST00000476597 CXXC1Q9P0U4 656 aaPredicted RBP12.48□□□□□ -0.41
SEC13-214ENST00000476597 SLC12A7Q9Y666 1083 aa12.48□□□□□ -0.41
SEC13-214ENST00000476597 UNC80Q8N2C7 3258 aa12.47□□□□□ -0.41
SEC13-214ENST00000476597 CUL9Q8IWT3 2517 aa12.47□□□□□ -0.41
SEC13-214ENST00000476597 PITPNM1O00562 1244 aa12.47□□□□□ -0.41
SEC13-214ENST00000476597 MEIS2O14770 477 aa12.47□□□□□ -0.41
SEC13-214ENST00000476597 HOXD8P13378 290 aaPredicted RBP12.47□□□□□ -0.41
SEC13-214ENST00000476597 RXRAP19793 462 aa12.47□□□□□ -0.41
SEC13-214ENST00000476597 DNAJB2P25686 324 aa12.47□□□□□ -0.41
SEC13-214ENST00000476597 MRPS9P82933 396 aaKnown RBP12.47□□□□□ -0.41
SEC13-214ENST00000476597 EXOSC10Q01780 885 aaKnown RBP12.47□□□□□ -0.41
SEC13-214ENST00000476597 CELF3Q5SZQ8 465 aaKnown RBP12.47□□□□□ -0.41
SEC13-214ENST00000476597 SESTD1Q86VW0 696 aa12.47□□□□□ -0.41
SEC13-214ENST00000476597 SGMS1Q86VZ5 419 aa12.47□□□□□ -0.41
SEC13-214ENST00000476597 RASEFQ8IZ41 740 aa12.47□□□□□ -0.41
SEC13-214ENST00000476597 CMTR1Q8N1G2 835 aaKnown RBP12.47□□□□□ -0.41
SEC13-214ENST00000476597 FANCBQ8NB91 859 aa12.47□□□□□ -0.41
SEC13-214ENST00000476597 PPTC7Q8NI37 304 aa12.47□□□□□ -0.41
SEC13-214ENST00000476597 ZFP91Q96JP5 570 aaPredicted RBP12.47□□□□□ -0.41
SEC13-214ENST00000476597 NEK1Q96PY6 1258 aa12.47□□□□□ -0.41
SEC13-214ENST00000476597 LRRC2Q9BYS8 371 aa12.47□□□□□ -0.41
SEC13-214ENST00000476597 PBX4Q9BYU1 374 aa12.47□□□□□ -0.41
SEC13-214ENST00000476597 FRMPD4Q14CM0 1322 aa12.46□□□□□ -0.41
SEC13-214ENST00000476597 GRXCR1A8MXD5 290 aa12.46□□□□□ -0.41
SEC13-214ENST00000476597 HAS3O00219 553 aa12.46□□□□□ -0.41
SEC13-214ENST00000476597 PIK3CDO00329 1044 aa12.46□□□□□ -0.41
SEC13-214ENST00000476597 CDC45O75419 566 aa12.46□□□□□ -0.41
SEC13-214ENST00000476597 STAM2O75886 525 aa12.46□□□□□ -0.41
SEC13-214ENST00000476597 GGPS1O95749 300 aa12.46□□□□□ -0.41
SEC13-214ENST00000476597 IQCF3P0C7M6 154 aa12.46□□□□□ -0.41
SEC13-214ENST00000476597 ICAM3P32942 547 aa12.46□□□□□ -0.41
SEC13-214ENST00000476597 CHMP4BP1P59074 171 aa12.46□□□□□ -0.41
SEC13-214ENST00000476597 PTGISQ16647 500 aa12.46□□□□□ -0.41
SEC13-214ENST00000476597 GDF6Q6KF10 455 aaPredicted RBP12.46□□□□□ -0.41
SEC13-214ENST00000476597 USP17L6PQ6QN14 398 aa12.46□□□□□ -0.41
SEC13-214ENST00000476597 DHX32Q7L7V1 743 aaKnown RBP12.46□□□□□ -0.41
SEC13-214ENST00000476597 OTOP2Q7RTS6 562 aa12.46□□□□□ -0.41
SEC13-214ENST00000476597 RETREG2Q8NC44 543 aa12.46□□□□□ -0.41
SEC13-214ENST00000476597 GPKOWQ92917 476 aaPredicted RBP eCLIP12.46□□□□□ -0.41
SEC13-214ENST00000476597 TIFAQ96CG3 184 aa12.46□□□□□ -0.41
SEC13-214ENST00000476597 CTAGE1Q96RT6 745 aa12.46□□□□□ -0.41
SEC13-214ENST00000476597 MTIF3Q9H2K0 278 aaKnown RBP12.46□□□□□ -0.41
SEC13-214ENST00000476597 SEC63Q9UGP8 760 aaKnown RBP12.46□□□□□ -0.41
SEC13-214ENST00000476597 SPATA31C2B4DYI2 1134 aa12.45□□□□□ -0.42
SEC13-214ENST00000476597 F2P00734 622 aa12.45□□□□□ -0.42
SEC13-214ENST00000476597 PFKMP08237 780 aa12.45□□□□□ -0.42
SEC13-214ENST00000476597 UBA1P22314 1058 aaKnown RBP12.45□□□□□ -0.42
SEC13-214ENST00000476597 RFC2P35250 354 aa12.45□□□□□ -0.42
SEC13-214ENST00000476597 PBX2P40425 430 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms