RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 DDX41Q9UJV9 622 aaKnown RBP15.31■□□□□ 0.04
MRPL55-228ENST00000476267 MRPL11Q9Y3B7 192 aaKnown RBP15.31■□□□□ 0.04
MRPL55-228ENST00000476267 RGS20O76081 388 aa15.3■□□□□ 0.04
MRPL55-228ENST00000476267 CA3P07451 260 aa15.3■□□□□ 0.04
MRPL55-228ENST00000476267 HOXD8P13378 290 aaPredicted RBP15.3■□□□□ 0.04
MRPL55-228ENST00000476267 GSPT1P15170 499 aaKnown RBP15.3■□□□□ 0.04
MRPL55-228ENST00000476267 PDE4AP27815 886 aa15.3■□□□□ 0.04
MRPL55-228ENST00000476267 BFSP2Q13515 415 aa15.3■□□□□ 0.04
MRPL55-228ENST00000476267 SEPT14Q6ZU15 432 aa15.3■□□□□ 0.04
MRPL55-228ENST00000476267 CYB5R4Q7L1T6 521 aa15.3■□□□□ 0.04
MRPL55-228ENST00000476267 TET1Q8NFU7 2136 aa15.3■□□□□ 0.04
MRPL55-228ENST00000476267 PHOSPHO2Q8TCD6 241 aa15.3■□□□□ 0.04
MRPL55-228ENST00000476267 CNNM2Q9H8M5 875 aa15.3■□□□□ 0.04
MRPL55-228ENST00000476267 CTNNA3Q9UI47 895 aa15.3■□□□□ 0.04
MRPL55-228ENST00000476267 MAD2L2Q9UI95 211 aa15.3■□□□□ 0.04
MRPL55-228ENST00000476267 TRIP12Q14669 1992 aaPredicted RBP15.29■□□□□ 0.04
MRPL55-228ENST00000476267 PALM3A6NDB9 673 aaPredicted RBP15.29■□□□□ 0.04
MRPL55-228ENST00000476267 EPOPA6NHQ4 379 aa15.29■□□□□ 0.04
MRPL55-228ENST00000476267 HAS3O00219 553 aa15.29■□□□□ 0.04
MRPL55-228ENST00000476267 EIF3JO75822 258 aaKnown RBP15.29■□□□□ 0.04
MRPL55-228ENST00000476267 ACTN1P12814 892 aa15.29■□□□□ 0.04
MRPL55-228ENST00000476267 EIF2AK2P19525 551 aaKnown RBP15.29■□□□□ 0.04
MRPL55-228ENST00000476267 IGFBP4P22692 258 aa15.29■□□□□ 0.04
MRPL55-228ENST00000476267 CCDC85BQ15834 202 aaPredicted RBP15.29■□□□□ 0.04
MRPL55-228ENST00000476267 PTGISQ16647 500 aa15.29■□□□□ 0.04
MRPL55-228ENST00000476267 TMEM67Q5HYA8 995 aa15.29■□□□□ 0.04
MRPL55-228ENST00000476267 STOX1Q6ZVD7 989 aa15.29■□□□□ 0.04
MRPL55-228ENST00000476267 CAGE1Q8TC20 777 aa15.29■□□□□ 0.04
MRPL55-228ENST00000476267 AFAP1L1Q8TED9 768 aa15.29■□□□□ 0.04
MRPL55-228ENST00000476267 AMNQ9BXJ7 453 aa15.29■□□□□ 0.04
MRPL55-228ENST00000476267 GTF2IRD1Q9UHL9 959 aa15.29■□□□□ 0.04
MRPL55-228ENST00000476267 MYH7BA7E2Y1 1941 aa15.28■□□□□ 0.04
MRPL55-228ENST00000476267 TNFRSF10AO00220 468 aa15.28■□□□□ 0.04
MRPL55-228ENST00000476267 BAIAP3O94812 1187 aa15.28■□□□□ 0.04
MRPL55-228ENST00000476267 F2P00734 622 aa15.28■□□□□ 0.04
MRPL55-228ENST00000476267 CXCL10P02778 98 aa15.28■□□□□ 0.04
MRPL55-228ENST00000476267 NR3C2P08235 984 aa15.28■□□□□ 0.04
MRPL55-228ENST00000476267 TAP1Q03518 808 aa15.28■□□□□ 0.04
MRPL55-228ENST00000476267 IFIT1BQ5T764 474 aaKnown RBP15.28■□□□□ 0.04
MRPL55-228ENST00000476267 ARHGEF16Q5VV41 709 aa15.28■□□□□ 0.04
MRPL55-228ENST00000476267 TRAF7Q6Q0C0 670 aa15.28■□□□□ 0.04
MRPL55-228ENST00000476267 HERC6Q8IVU3 1022 aa15.28■□□□□ 0.04
MRPL55-228ENST00000476267 RETREG2Q8NC44 543 aa15.28■□□□□ 0.04
MRPL55-228ENST00000476267 PDCD2LQ9BRP1 358 aa15.28■□□□□ 0.04
MRPL55-228ENST00000476267 UBAC1Q9BSL1 405 aa15.28■□□□□ 0.04
MRPL55-228ENST00000476267 VAT1LQ9HCJ6 419 aa15.28■□□□□ 0.04
MRPL55-228ENST00000476267 MAP3K20Q9NYL2 800 aaKnown RBP15.28■□□□□ 0.04
MRPL55-228ENST00000476267 KLRF2D3W0D1 207 aa15.27■□□□□ 0.04
MRPL55-228ENST00000476267 RFXAPO00287 272 aa15.27■□□□□ 0.04
MRPL55-228ENST00000476267 ZBTB5O15062 677 aa15.27■□□□□ 0.04
MRPL55-228ENST00000476267 CFBP00751 764 aa15.27■□□□□ 0.04
MRPL55-228ENST00000476267 CASTP20810 708 aaKnown RBP15.27■□□□□ 0.04
MRPL55-228ENST00000476267 MRPS5P82675 430 aaKnown RBP15.27■□□□□ 0.04
MRPL55-228ENST00000476267 DGKDQ16760 1214 aa15.27■□□□□ 0.04
MRPL55-228ENST00000476267 TCTN1Q2MV58 587 aa15.27■□□□□ 0.04
MRPL55-228ENST00000476267 TRIM71Q2Q1W2 868 aaKnown RBP15.27■□□□□ 0.04
MRPL55-228ENST00000476267 CHST3Q7LGC8 479 aa15.27■□□□□ 0.04
MRPL55-228ENST00000476267 PPTC7Q8NI37 304 aa15.27■□□□□ 0.04
MRPL55-228ENST00000476267 HDAC6Q9UBN7 1215 aa15.27■□□□□ 0.04
MRPL55-228ENST00000476267 MTCH2Q9Y6C9 303 aa15.27■□□□□ 0.04
MRPL55-228ENST00000476267 DHX16O60231 1041 aaKnown RBP15.26■□□□□ 0.03
MRPL55-228ENST00000476267 NBNO60934 754 aa15.26■□□□□ 0.03
MRPL55-228ENST00000476267 CYP21A2P08686 494 aa15.26■□□□□ 0.03
MRPL55-228ENST00000476267 SELPP16109 830 aa15.26■□□□□ 0.03
MRPL55-228ENST00000476267 PSEN2P49810 448 aa15.26■□□□□ 0.03
MRPL55-228ENST00000476267 WDR5P61964 334 aaKnown RBP15.26■□□□□ 0.03
MRPL55-228ENST00000476267 LAMC2Q13753 1193 aa15.26■□□□□ 0.03
MRPL55-228ENST00000476267 HIC1Q14526 733 aa15.26■□□□□ 0.03
MRPL55-228ENST00000476267 GRM4Q14833 912 aa15.26■□□□□ 0.03
MRPL55-228ENST00000476267 PGM5Q15124 567 aa15.26■□□□□ 0.03
MRPL55-228ENST00000476267 TTC22Q5TAA0 569 aa15.26■□□□□ 0.03
MRPL55-228ENST00000476267 MYSM1Q5VVJ2 828 aa15.26■□□□□ 0.03
MRPL55-228ENST00000476267 LRRC8DQ7L1W4 858 aa15.26■□□□□ 0.03
MRPL55-228ENST00000476267 SPRED2Q7Z698 418 aa15.26■□□□□ 0.03
MRPL55-228ENST00000476267 SAMD3Q8N6K7 520 aa15.26■□□□□ 0.03
MRPL55-228ENST00000476267 CCDC155Q8N6L0 562 aa15.26■□□□□ 0.03
MRPL55-228ENST00000476267 IL31RAQ8NI17 732 aa15.26■□□□□ 0.03
MRPL55-228ENST00000476267 ADAMTS19Q8TE59 1207 aa15.26■□□□□ 0.03
MRPL55-228ENST00000476267 WNT8BQ93098 351 aa15.26■□□□□ 0.03
MRPL55-228ENST00000476267 RIOX1Q9H6W3 641 aa15.26■□□□□ 0.03
MRPL55-228ENST00000476267 SENP2Q9HC62 589 aa15.26■□□□□ 0.03
MRPL55-228ENST00000476267 NOD1Q9Y239 953 aa15.26■□□□□ 0.03
MRPL55-228ENST00000476267 MRVI1Q9Y6F6 885 aa15.26■□□□□ 0.03
MRPL55-228ENST00000476267 TAF6LQ9Y6J9 622 aa15.26■□□□□ 0.03
MRPL55-228ENST00000476267 FRMPD4Q14CM0 1322 aa15.25■□□□□ 0.03
MRPL55-228ENST00000476267 RBAK-RBAKDNI3L0D1 243 aa15.25■□□□□ 0.03
MRPL55-228ENST00000476267 CYTH3O43739 400 aa15.25■□□□□ 0.03
MRPL55-228ENST00000476267 LPXNO60711 386 aa15.25■□□□□ 0.03
MRPL55-228ENST00000476267 ZNF286BP0CG31 522 aa15.25■□□□□ 0.03
MRPL55-228ENST00000476267 CKBP12277 381 aa15.25■□□□□ 0.03
MRPL55-228ENST00000476267 TROAPQ12815 778 aa15.25■□□□□ 0.03
MRPL55-228ENST00000476267 MKRN4PQ13434 485 aaPredicted RBP15.25■□□□□ 0.03
MRPL55-228ENST00000476267 MFSD10Q14728 455 aa15.25■□□□□ 0.03
MRPL55-228ENST00000476267 VSIG10LQ86VR7 867 aa15.25■□□□□ 0.03
MRPL55-228ENST00000476267 KATNAL1Q9BW62 490 aa15.25■□□□□ 0.03
MRPL55-228ENST00000476267 FTOQ9C0B1 505 aaKnown RBP eCLIP15.25■□□□□ 0.03
MRPL55-228ENST00000476267 PCDHA1Q9Y5I3 950 aa15.25■□□□□ 0.03
MRPL55-228ENST00000476267 SIP14410 1827 aa15.24■□□□□ 0.03
MRPL55-228ENST00000476267 LCHNA4D1U4 455 aa15.24■□□□□ 0.03
MRPL55-228ENST00000476267 PARNO95453 639 aaKnown RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms