RNA–Protein interactions for RNA: ENST00000476143.6

TMCO1-205, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 3

Gene TMCO1, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-205ENST00000476143 NOD1Q9Y239 953 aa15.9■□□□□ 0.14
TMCO1-205ENST00000476143 SOX1O00570 391 aaPredicted RBP15.89■□□□□ 0.13
TMCO1-205ENST00000476143 OPLAHO14841 1288 aa15.89■□□□□ 0.13
TMCO1-205ENST00000476143 PLEKHA8P1O95397 391 aa15.89■□□□□ 0.13
TMCO1-205ENST00000476143 TGFB3P10600 412 aa15.89■□□□□ 0.13
TMCO1-205ENST00000476143 CHMP4BP1P59074 171 aa15.89■□□□□ 0.13
TMCO1-205ENST00000476143 SHHQ15465 462 aa15.89■□□□□ 0.13
TMCO1-205ENST00000476143 DGKDQ16760 1214 aa15.89■□□□□ 0.13
TMCO1-205ENST00000476143 RTN1Q16799 776 aa15.89■□□□□ 0.13
TMCO1-205ENST00000476143 LY6KQ17RY6 165 aa15.89■□□□□ 0.13
TMCO1-205ENST00000476143 TMEM63BQ5T3F8 832 aa15.89■□□□□ 0.13
TMCO1-205ENST00000476143 BLOC1S2Q6QNY1 142 aa15.89■□□□□ 0.13
TMCO1-205ENST00000476143 SLC43A3Q8NBI5 491 aa15.89■□□□□ 0.13
TMCO1-205ENST00000476143 COPS5Q92905 334 aa15.89■□□□□ 0.13
TMCO1-205ENST00000476143 HIPK3Q9H422 1215 aa15.89■□□□□ 0.13
TMCO1-205ENST00000476143 EHMT1Q9H9B1 1298 aa15.89■□□□□ 0.13
TMCO1-205ENST00000476143 CCDC196A0A1B0GTZ2 297 aa15.88■□□□□ 0.13
TMCO1-205ENST00000476143 ARIH2O95376 493 aa15.88■□□□□ 0.13
TMCO1-205ENST00000476143 PTGS1P23219 599 aa15.88■□□□□ 0.13
TMCO1-205ENST00000476143 PTPN11Q06124 597 aaPredicted RBP15.88■□□□□ 0.13
TMCO1-205ENST00000476143 NFRKBQ6P4R8 1299 aa15.88■□□□□ 0.13
TMCO1-205ENST00000476143 CCDC62Q6P9F0 684 aa15.88■□□□□ 0.13
TMCO1-205ENST00000476143 PSRC1Q6PGN9 363 aaPredicted RBP15.88■□□□□ 0.13
TMCO1-205ENST00000476143 APOA5Q6Q788 366 aa15.88■□□□□ 0.13
TMCO1-205ENST00000476143 TMTC3Q6ZXV5 915 aa15.88■□□□□ 0.13
TMCO1-205ENST00000476143 VSIG10LQ86VR7 867 aa15.88■□□□□ 0.13
TMCO1-205ENST00000476143 RAB11FIP4Q86YS3 637 aa15.88■□□□□ 0.13
TMCO1-205ENST00000476143 CCDC82Q8N4S0 544 aa15.88■□□□□ 0.13
TMCO1-205ENST00000476143 AFG1LQ8WV93 481 aa15.88■□□□□ 0.13
TMCO1-205ENST00000476143 JAKMIP1Q96N16 626 aaKnown RBP15.88■□□□□ 0.13
TMCO1-205ENST00000476143 ALDH8A1Q9H2A2 487 aaPredicted RBP15.88■□□□□ 0.13
TMCO1-205ENST00000476143 DDX41Q9UJV9 622 aaKnown RBP15.88■□□□□ 0.13
TMCO1-205ENST00000476143 SPDYE3A6NKU9 549 aa15.87■□□□□ 0.13
TMCO1-205ENST00000476143 GOLGA8AA7E2F4 631 aa15.87■□□□□ 0.13
TMCO1-205ENST00000476143 GOLGA8BA8MQT2 603 aa15.87■□□□□ 0.13
TMCO1-205ENST00000476143 EPB41L2O43491 1005 aaKnown RBP15.87■□□□□ 0.13
TMCO1-205ENST00000476143 CD4P01730 458 aa15.87■□□□□ 0.13
TMCO1-205ENST00000476143 MMP3P08254 477 aa15.87■□□□□ 0.13
TMCO1-205ENST00000476143 ITGB8P26012 769 aa15.87■□□□□ 0.13
TMCO1-205ENST00000476143 HSPA4P34932 840 aa15.87■□□□□ 0.13
TMCO1-205ENST00000476143 RCAN1P53805 252 aa15.87■□□□□ 0.13
TMCO1-205ENST00000476143 ARHGAP1Q07960 439 aa15.87■□□□□ 0.13
TMCO1-205ENST00000476143 SLC35G1Q2M3R5 365 aa15.87■□□□□ 0.13
TMCO1-205ENST00000476143 XRRA1Q6P2D8 792 aa15.87■□□□□ 0.13
TMCO1-205ENST00000476143 HEATR3Q7Z4Q2 680 aa15.87■□□□□ 0.13
TMCO1-205ENST00000476143 SRBD1Q8N5C6 995 aaKnown RBP15.87■□□□□ 0.13
TMCO1-205ENST00000476143 CCDC155Q8N6L0 562 aa15.87■□□□□ 0.13
TMCO1-205ENST00000476143 EMID1Q96A84 441 aaPredicted RBP15.87■□□□□ 0.13
TMCO1-205ENST00000476143 PSTPIP2Q9H939 334 aa15.87■□□□□ 0.13
TMCO1-205ENST00000476143 MLXIPQ9HAP2 919 aa15.87■□□□□ 0.13
TMCO1-205ENST00000476143 MYH7BA7E2Y1 1941 aa15.86■□□□□ 0.13
TMCO1-205ENST00000476143 KLF18A0A0U1RQI7 1052 aa15.86■□□□□ 0.13
TMCO1-205ENST00000476143 hCG_1984214I3L0E3 225 aa15.86■□□□□ 0.13
TMCO1-205ENST00000476143 PIK3CDO00329 1044 aa15.86■□□□□ 0.13
TMCO1-205ENST00000476143 NOP56O00567 594 aaKnown RBP15.86■□□□□ 0.13
TMCO1-205ENST00000476143 B4GALT4O60513 344 aa15.86■□□□□ 0.13
TMCO1-205ENST00000476143 EIF5BO60841 1220 aaKnown RBP15.86■□□□□ 0.13
TMCO1-205ENST00000476143 EXOSC10Q01780 885 aaKnown RBP15.86■□□□□ 0.13
TMCO1-205ENST00000476143 NBPF20Q3BBV1 942 aa15.86■□□□□ 0.13
TMCO1-205ENST00000476143 ADCK5Q3MIX3 580 aa15.86■□□□□ 0.13
TMCO1-205ENST00000476143 C9orf50Q5SZB4 431 aa15.86■□□□□ 0.13
TMCO1-205ENST00000476143 ZNF697Q5TEC3 545 aa15.86■□□□□ 0.13
TMCO1-205ENST00000476143 NLRX1Q86UT6 975 aa15.86■□□□□ 0.13
TMCO1-205ENST00000476143 RASEFQ8IZ41 740 aa15.86■□□□□ 0.13
TMCO1-205ENST00000476143 RPUSD2Q8IZ73 545 aaKnown RBP15.86■□□□□ 0.13
TMCO1-205ENST00000476143 CMTR1Q8N1G2 835 aaKnown RBP15.86■□□□□ 0.13
TMCO1-205ENST00000476143 DEFB123Q8N688 67 aa15.86■□□□□ 0.13
TMCO1-205ENST00000476143 ZNF713Q8N859 430 aaPredicted RBP15.86■□□□□ 0.13
TMCO1-205ENST00000476143 PPTC7Q8NI37 304 aa15.86■□□□□ 0.13
TMCO1-205ENST00000476143 TCEANC2Q96MN5 208 aa15.86■□□□□ 0.13
TMCO1-205ENST00000476143 GGPS1O95749 300 aa15.85■□□□□ 0.13
TMCO1-205ENST00000476143 METAP2P50579 478 aaKnown RBP eCLIP15.85■□□□□ 0.132e-7■■■□□ 15.8
TMCO1-205ENST00000476143 BFSP2Q13515 415 aa15.85■□□□□ 0.13
TMCO1-205ENST00000476143 NEDD9Q14511 834 aa15.85■□□□□ 0.13
TMCO1-205ENST00000476143 PPP1R18Q6NYC8 613 aa15.85■□□□□ 0.13
TMCO1-205ENST00000476143 TEX2Q8IWB9 1127 aa15.85■□□□□ 0.13
TMCO1-205ENST00000476143 C7orf31Q8N865 590 aa15.85■□□□□ 0.13
TMCO1-205ENST00000476143 RETREG2Q8NC44 543 aa15.85■□□□□ 0.13
TMCO1-205ENST00000476143 GIMAP8Q8ND71 665 aaPredicted RBP15.85■□□□□ 0.13
TMCO1-205ENST00000476143 CDHR1Q96JP9 859 aa15.85■□□□□ 0.13
TMCO1-205ENST00000476143 SPATA33Q96N06 139 aa15.85■□□□□ 0.13
TMCO1-205ENST00000476143 GLT8D2Q9H1C3 349 aa15.85■□□□□ 0.13
TMCO1-205ENST00000476143 TRPV6Q9H1D0 765 aa15.85■□□□□ 0.13
TMCO1-205ENST00000476143 SCN10AQ9Y5Y9 1956 aa15.85■□□□□ 0.13
TMCO1-205ENST00000476143 GRIN2DO15399 1336 aa15.85■□□□□ 0.13
TMCO1-205ENST00000476143 FIBPO43427 364 aa15.84■□□□□ 0.13
TMCO1-205ENST00000476143 PPFIA4O75335 1185 aa15.84■□□□□ 0.13
TMCO1-205ENST00000476143 CSF2RAP15509 400 aa15.84■□□□□ 0.13
TMCO1-205ENST00000476143 CYP2C18P33260 490 aa15.84■□□□□ 0.13
TMCO1-205ENST00000476143 NAPAP54920 295 aa15.84■□□□□ 0.13
TMCO1-205ENST00000476143 SMAD3P84022 425 aaKnown RBP15.84■□□□□ 0.13
TMCO1-205ENST00000476143 AKAP17AQ02040 695 aaKnown RBP15.84■□□□□ 0.13
TMCO1-205ENST00000476143 PCNX4Q63HM2 1172 aa15.84■□□□□ 0.13
TMCO1-205ENST00000476143 USP17L6PQ6QN14 398 aa15.84■□□□□ 0.13
TMCO1-205ENST00000476143 Q6ZUG5 572 aa15.84■□□□□ 0.13
TMCO1-205ENST00000476143 IL23AQ9NPF7 189 aa15.84■□□□□ 0.13
TMCO1-205ENST00000476143 TRMT13Q9NUP7 481 aaKnown RBP15.84■□□□□ 0.13
TMCO1-205ENST00000476143 SNX14Q9Y5W7 946 aa15.84■□□□□ 0.13
TMCO1-205ENST00000476143 FRMPD4Q14CM0 1322 aa15.84■□□□□ 0.13
TMCO1-205ENST00000476143 DNAH12Q6ZR08 3092 aa15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms