RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 SEZ6LQ9BYH1 1024 aa13.18□□□□□ -0.3
NUDCD3-206ENST00000475952 GPHNQ9NQX3 736 aaPredicted RBP13.18□□□□□ -0.3
NUDCD3-206ENST00000475952 PXMP2Q9NR77 195 aa13.18□□□□□ -0.3
NUDCD3-206ENST00000475952 GCOM1H8Y6P7 765 aaPredicted RBP13.17□□□□□ -0.3
NUDCD3-206ENST00000475952 POLR2MP0CAP2 368 aa13.17□□□□□ -0.3
NUDCD3-206ENST00000475952 TXNP10599 105 aaKnown RBP13.17□□□□□ -0.3
NUDCD3-206ENST00000475952 EIF2AK2P19525 551 aaKnown RBP13.17□□□□□ -0.3
NUDCD3-206ENST00000475952 PTGS1P23219 599 aa13.17□□□□□ -0.3
NUDCD3-206ENST00000475952 CDK7P50613 346 aa13.17□□□□□ -0.3
NUDCD3-206ENST00000475952 FAAP100Q0VG06 881 aa13.17□□□□□ -0.3
NUDCD3-206ENST00000475952 SLC35G1Q2M3R5 365 aa13.17□□□□□ -0.3
NUDCD3-206ENST00000475952 TMEM63BQ5T3F8 832 aa13.17□□□□□ -0.3
NUDCD3-206ENST00000475952 SYNE3Q6ZMZ3 975 aa13.17□□□□□ -0.3
NUDCD3-206ENST00000475952 SGMS1Q86VZ5 419 aa13.17□□□□□ -0.3
NUDCD3-206ENST00000475952 MICU3Q86XE3 530 aa13.17□□□□□ -0.3
NUDCD3-206ENST00000475952 FAM122AQ96E09 287 aa13.17□□□□□ -0.3
NUDCD3-206ENST00000475952 LRRC2Q9BYS8 371 aa13.17□□□□□ -0.3
NUDCD3-206ENST00000475952 ZNF576Q9H609 170 aa13.17□□□□□ -0.3
NUDCD3-206ENST00000475952 WDR81Q562E7 1941 aa13.17□□□□□ -0.3
NUDCD3-206ENST00000475952 REC8O95072 547 aa13.16□□□□□ -0.3
NUDCD3-206ENST00000475952 RXRAP19793 462 aa13.16□□□□□ -0.3
NUDCD3-206ENST00000475952 ITGA7Q13683 1181 aa13.16□□□□□ -0.3
NUDCD3-206ENST00000475952 TSGA10IPQ3SY00 556 aa13.16□□□□□ -0.3
NUDCD3-206ENST00000475952 SEPT14Q6ZU15 432 aa13.16□□□□□ -0.3
NUDCD3-206ENST00000475952 FAM126BQ8IXS8 530 aa13.16□□□□□ -0.3
NUDCD3-206ENST00000475952 ADAMTS19Q8TE59 1207 aa13.16□□□□□ -0.3
NUDCD3-206ENST00000475952 ATXN2LQ8WWM7 1075 aaKnown RBP13.16□□□□□ -0.3
NUDCD3-206ENST00000475952 PIBF1Q8WXW3 757 aa13.16□□□□□ -0.3
NUDCD3-206ENST00000475952 THEGQ9P2T0 379 aa13.16□□□□□ -0.3
NUDCD3-206ENST00000475952 PIEZO1Q92508 2521 aa13.16□□□□□ -0.3
NUDCD3-206ENST00000475952 MYH9P35579 1960 aaKnown RBP13.15□□□□□ -0.3
NUDCD3-206ENST00000475952 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.15□□□□□ -0.3
NUDCD3-206ENST00000475952 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.15□□□□□ -0.3
NUDCD3-206ENST00000475952 EIF3JO75822 258 aaKnown RBP13.15□□□□□ -0.3
NUDCD3-206ENST00000475952 ARIH2O95376 493 aa13.15□□□□□ -0.3
NUDCD3-206ENST00000475952 PLEKHA8P1O95397 391 aa13.15□□□□□ -0.3
NUDCD3-206ENST00000475952 GH1P01241 217 aa13.15□□□□□ -0.3
NUDCD3-206ENST00000475952 NR3C2P08235 984 aa13.15□□□□□ -0.3
NUDCD3-206ENST00000475952 MYL3P08590 195 aa13.15□□□□□ -0.3
NUDCD3-206ENST00000475952 HMGB1P09429 215 aaKnown RBP13.15□□□□□ -0.3
NUDCD3-206ENST00000475952 HOXA13P31271 388 aaPredicted RBP13.15□□□□□ -0.3
NUDCD3-206ENST00000475952 PURAQ00577 322 aaKnown RBP13.15□□□□□ -0.3
NUDCD3-206ENST00000475952 FPGSQ05932 587 aa13.15□□□□□ -0.3
NUDCD3-206ENST00000475952 COL9A3Q14050 684 aaPredicted RBP13.15□□□□□ -0.3
NUDCD3-206ENST00000475952 PGM5Q15124 567 aa13.15□□□□□ -0.3
NUDCD3-206ENST00000475952 DHX32Q7L7V1 743 aaKnown RBP13.15□□□□□ -0.3
NUDCD3-206ENST00000475952 SLC43A3Q8NBI5 491 aa13.15□□□□□ -0.3
NUDCD3-206ENST00000475952 CUL5Q93034 780 aa13.15□□□□□ -0.3
NUDCD3-206ENST00000475952 TIFAQ96CG3 184 aa13.15□□□□□ -0.3
NUDCD3-206ENST00000475952 ASB2Q96Q27 587 aa13.15□□□□□ -0.3
NUDCD3-206ENST00000475952 PDCD2LQ9BRP1 358 aa13.15□□□□□ -0.3
NUDCD3-206ENST00000475952 MTG1Q9BT17 334 aaPredicted RBP13.15□□□□□ -0.3
NUDCD3-206ENST00000475952 RBM28Q9NW13 759 aaKnown RBP13.15□□□□□ -0.3
NUDCD3-206ENST00000475952 TBX21Q9UL17 535 aa13.15□□□□□ -0.3
NUDCD3-206ENST00000475952 MRVI1Q9Y6F6 885 aa13.15□□□□□ -0.3
NUDCD3-206ENST00000475952 A6NJR5 290 aa13.14□□□□□ -0.31
NUDCD3-206ENST00000475952 KPNA6O60684 536 aa13.14□□□□□ -0.31
NUDCD3-206ENST00000475952 TIMP1P01033 207 aa13.14□□□□□ -0.31
NUDCD3-206ENST00000475952 CENPBP07199 599 aaPredicted RBP13.14□□□□□ -0.31
NUDCD3-206ENST00000475952 MYCLP12524 364 aaPredicted RBP13.14□□□□□ -0.31
NUDCD3-206ENST00000475952 CCND2P30279 289 aa13.14□□□□□ -0.31
NUDCD3-206ENST00000475952 HOXD11P31277 338 aaPredicted RBP13.14□□□□□ -0.31
NUDCD3-206ENST00000475952 PSMC6P62333 389 aa13.14□□□□□ -0.31
NUDCD3-206ENST00000475952 FGD1P98174 961 aa13.14□□□□□ -0.31
NUDCD3-206ENST00000475952 ADCK5Q3MIX3 580 aa13.14□□□□□ -0.31
NUDCD3-206ENST00000475952 ERICH6BQ5W0A0 696 aa13.14□□□□□ -0.31
NUDCD3-206ENST00000475952 CCDC62Q6P9F0 684 aa13.14□□□□□ -0.31
NUDCD3-206ENST00000475952 KCNV1Q6PIU1 500 aa13.14□□□□□ -0.31
NUDCD3-206ENST00000475952 APOA5Q6Q788 366 aa13.14□□□□□ -0.31
NUDCD3-206ENST00000475952 TMTC3Q6ZXV5 915 aa13.14□□□□□ -0.31
NUDCD3-206ENST00000475952 FCHSD1Q86WN1 690 aa13.14□□□□□ -0.31
NUDCD3-206ENST00000475952 RAB11FIP4Q86YS3 637 aa13.14□□□□□ -0.31
NUDCD3-206ENST00000475952 RASEFQ8IZ41 740 aa13.14□□□□□ -0.31
NUDCD3-206ENST00000475952 SRBD1Q8N5C6 995 aaKnown RBP13.14□□□□□ -0.31
NUDCD3-206ENST00000475952 FANCBQ8NB91 859 aa13.14□□□□□ -0.31
NUDCD3-206ENST00000475952 SMARCC2Q8TAQ2 1214 aa13.14□□□□□ -0.31
NUDCD3-206ENST00000475952 PPM1EQ8WY54 764 aa13.14□□□□□ -0.31
NUDCD3-206ENST00000475952 COPS5Q92905 334 aa13.14□□□□□ -0.31
NUDCD3-206ENST00000475952 UHRF1Q96T88 793 aaPredicted RBP13.14□□□□□ -0.31
NUDCD3-206ENST00000475952 PPP4R2Q9NY27 417 aa13.14□□□□□ -0.31
NUDCD3-206ENST00000475952 FRMPD4Q14CM0 1322 aa13.13□□□□□ -0.31
NUDCD3-206ENST00000475952 ZBTB43O43298 467 aa13.13□□□□□ -0.31
NUDCD3-206ENST00000475952 CD4P01730 458 aa13.13□□□□□ -0.31
NUDCD3-206ENST00000475952 MMP3P08254 477 aa13.13□□□□□ -0.31
NUDCD3-206ENST00000475952 HSPA4P34932 840 aa13.13□□□□□ -0.31
NUDCD3-206ENST00000475952 EXOSC10Q01780 885 aaKnown RBP13.13□□□□□ -0.31
NUDCD3-206ENST00000475952 ARHGAP1Q07960 439 aa13.13□□□□□ -0.31
NUDCD3-206ENST00000475952 LY6KQ17RY6 165 aa13.13□□□□□ -0.31
NUDCD3-206ENST00000475952 GNPTABQ3T906 1256 aa13.13□□□□□ -0.31
NUDCD3-206ENST00000475952 MFSD5Q6N075 450 aa13.13□□□□□ -0.31
NUDCD3-206ENST00000475952 CMTR1Q8N1G2 835 aaKnown RBP13.13□□□□□ -0.31
NUDCD3-206ENST00000475952 TCEANC2Q96MN5 208 aa13.13□□□□□ -0.31
NUDCD3-206ENST00000475952 GAS2L1Q99501 681 aaPredicted RBP13.13□□□□□ -0.31
NUDCD3-206ENST00000475952 PPP1R12CQ9BZL4 782 aa13.13□□□□□ -0.31
NUDCD3-206ENST00000475952 DDX41Q9UJV9 622 aaKnown RBP13.13□□□□□ -0.31
NUDCD3-206ENST00000475952 TET1Q8NFU7 2136 aa13.13□□□□□ -0.31
NUDCD3-206ENST00000475952 GRIN2DO15399 1336 aa13.13□□□□□ -0.31
NUDCD3-206ENST00000475952 CNTNAP5Q8WYK1 1306 aa13.13□□□□□ -0.31
NUDCD3-206ENST00000475952 EPB41L2O43491 1005 aaKnown RBP13.12□□□□□ -0.31
NUDCD3-206ENST00000475952 STAM2O75886 525 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms