RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 CIITAP33076 1130 aa11.71□□□□□ -0.53
COL12A1-206ENST00000474564 PRPHP41219 470 aa11.71□□□□□ -0.53
COL12A1-206ENST00000474564 RGS2P41220 211 aa11.71□□□□□ -0.53
COL12A1-206ENST00000474564 TOB1P50616 345 aaPredicted RBP11.71□□□□□ -0.53
COL12A1-206ENST00000474564 UBE2HP62256 183 aa11.71□□□□□ -0.53
COL12A1-206ENST00000474564 PGM5Q15124 567 aa11.71□□□□□ -0.53
COL12A1-206ENST00000474564 Q4G0T1 1027 aa11.71□□□□□ -0.53
COL12A1-206ENST00000474564 EARS2Q5JPH6 523 aaKnown RBP11.71□□□□□ -0.53
COL12A1-206ENST00000474564 KCNV1Q6PIU1 500 aa11.71□□□□□ -0.53
COL12A1-206ENST00000474564 CCDC73Q6ZRK6 1079 aa11.71□□□□□ -0.53
COL12A1-206ENST00000474564 ZNF467Q7Z7K2 595 aaPredicted RBP11.71□□□□□ -0.53
COL12A1-206ENST00000474564 TRMT44Q8IYL2 757 aaKnown RBP11.71□□□□□ -0.53
COL12A1-206ENST00000474564 MSL3Q8N5Y2 521 aaKnown RBP11.71□□□□□ -0.53
COL12A1-206ENST00000474564 GIMAP8Q8ND71 665 aaPredicted RBP11.71□□□□□ -0.53
COL12A1-206ENST00000474564 RASSF8Q8NHQ8 419 aa11.71□□□□□ -0.53
COL12A1-206ENST00000474564 ERO1AQ96HE7 468 aa11.71□□□□□ -0.53
COL12A1-206ENST00000474564 MXRA8Q9BRK3 442 aa11.71□□□□□ -0.53
COL12A1-206ENST00000474564 PDCD2LQ9BRP1 358 aa11.71□□□□□ -0.53
COL12A1-206ENST00000474564 CFHR5Q9BXR6 569 aa11.71□□□□□ -0.53
COL12A1-206ENST00000474564 PORCNQ9H237 461 aa11.71□□□□□ -0.53
COL12A1-206ENST00000474564 RNF186Q9NXI6 227 aa11.71□□□□□ -0.53
COL12A1-206ENST00000474564 PCDHA12Q9UN75 941 aa11.71□□□□□ -0.53
COL12A1-206ENST00000474564 MORC2Q9Y6X9 1032 aaPredicted RBP11.71□□□□□ -0.53
COL12A1-206ENST00000474564 RPTORQ8N122 1335 aa11.7□□□□□ -0.54
COL12A1-206ENST00000474564 FAM205CA6NFA0 338 aa11.7□□□□□ -0.54
COL12A1-206ENST00000474564 TRAK2O60296 914 aa11.7□□□□□ -0.54
COL12A1-206ENST00000474564 TBC1D8O95759 1140 aa11.7□□□□□ -0.54
COL12A1-206ENST00000474564 LONP1P36776 959 aaKnown RBP11.7□□□□□ -0.54
COL12A1-206ENST00000474564 ALDH5A1P51649 535 aaPredicted RBP11.7□□□□□ -0.54
COL12A1-206ENST00000474564 UBXN2AP68543 259 aa11.7□□□□□ -0.54
COL12A1-206ENST00000474564 ATP2C1P98194 919 aaPredicted RBP11.7□□□□□ -0.54
COL12A1-206ENST00000474564 MAP2K5Q13163 448 aa11.7□□□□□ -0.54
COL12A1-206ENST00000474564 MTMR1Q13613 665 aa11.7□□□□□ -0.54
COL12A1-206ENST00000474564 ADALQ6DHV7 355 aa11.7□□□□□ -0.54
COL12A1-206ENST00000474564 VSIG10LQ86VR7 867 aa11.7□□□□□ -0.54
COL12A1-206ENST00000474564 FAM133AQ8N9E0 248 aa11.7□□□□□ -0.54
COL12A1-206ENST00000474564 TMEM87AQ8NBN3 555 aa11.7□□□□□ -0.54
COL12A1-206ENST00000474564 ERMNQ8TAM6 284 aa11.7□□□□□ -0.54
COL12A1-206ENST00000474564 SYAP1Q96A49 352 aaPredicted RBP11.7□□□□□ -0.54
COL12A1-206ENST00000474564 AK8Q96MA6 479 aa11.7□□□□□ -0.54
COL12A1-206ENST00000474564 ZIC5Q96T25 663 aa11.7□□□□□ -0.54
COL12A1-206ENST00000474564 WDR11Q9BZH6 1224 aa11.7□□□□□ -0.54
COL12A1-206ENST00000474564 TBC1D22BQ9NU19 505 aa11.7□□□□□ -0.54
COL12A1-206ENST00000474564 SRPRBQ9Y5M8 271 aaKnown RBP11.7□□□□□ -0.54
COL12A1-206ENST00000474564 ADGRA2Q96PE1 1338 aa11.69□□□□□ -0.54
COL12A1-206ENST00000474564 DNAJC25-GNG10A0A024R161 153 aa11.69□□□□□ -0.54
COL12A1-206ENST00000474564 PEX10O60683 326 aa11.69□□□□□ -0.54
COL12A1-206ENST00000474564 TDP2O95551 362 aa11.69□□□□□ -0.54
COL12A1-206ENST00000474564 PGK2P07205 417 aa11.69□□□□□ -0.54
COL12A1-206ENST00000474564 TGFB3P10600 412 aa11.69□□□□□ -0.54
COL12A1-206ENST00000474564 MARCKSP29966 332 aaPredicted RBP11.69□□□□□ -0.54
COL12A1-206ENST00000474564 UBA7P41226 1012 aa11.69□□□□□ -0.54
COL12A1-206ENST00000474564 TXKP42681 527 aa11.69□□□□□ -0.54
COL12A1-206ENST00000474564 PSMC4P43686 418 aa11.69□□□□□ -0.54
COL12A1-206ENST00000474564 GRB14Q14449 540 aa11.69□□□□□ -0.54
COL12A1-206ENST00000474564 PDIA5Q14554 519 aa11.69□□□□□ -0.54
COL12A1-206ENST00000474564 POTEEQ6S8J3 1075 aa11.69□□□□□ -0.54
COL12A1-206ENST00000474564 ZNF579Q8NAF0 562 aaKnown RBP11.69□□□□□ -0.54
COL12A1-206ENST00000474564 GPRASP2Q96D09 838 aa11.69□□□□□ -0.54
COL12A1-206ENST00000474564 SDF4Q9BRK5 362 aa11.69□□□□□ -0.54
COL12A1-206ENST00000474564 ZNF577Q9BSK1 485 aa11.69□□□□□ -0.54
COL12A1-206ENST00000474564 GDPD2Q9HCC8 539 aa11.69□□□□□ -0.54
COL12A1-206ENST00000474564 JADE2Q9NQC1 790 aa11.69□□□□□ -0.54
COL12A1-206ENST00000474564 COL20A1Q9P218 1284 aa11.69□□□□□ -0.54
COL12A1-206ENST00000474564 CCDC39Q9UFE4 941 aa11.69□□□□□ -0.54
COL12A1-206ENST00000474564 HOOK1Q9UJC3 728 aaKnown RBP11.69□□□□□ -0.54
COL12A1-206ENST00000474564 A0A0G2JMZ2 1700 aa11.69□□□□□ -0.54
COL12A1-206ENST00000474564 RLFQ13129 1914 aa11.68□□□□□ -0.54
COL12A1-206ENST00000474564 FRMPD4Q14CM0 1322 aa11.68□□□□□ -0.54
COL12A1-206ENST00000474564 PARP14Q460N5 1801 aa11.68□□□□□ -0.54
COL12A1-206ENST00000474564 A0A1W2PQ27 194 aa11.68□□□□□ -0.54
COL12A1-206ENST00000474564 A0A1W2PQ64 194 aa11.68□□□□□ -0.54
COL12A1-206ENST00000474564 A0A1W2PQD8 194 aa11.68□□□□□ -0.54
COL12A1-206ENST00000474564 VWA3AA6NCI4 1184 aa11.68□□□□□ -0.54
COL12A1-206ENST00000474564 MEIS1O00470 390 aa11.68□□□□□ -0.54
COL12A1-206ENST00000474564 ADAMTS3O15072 1205 aa11.68□□□□□ -0.54
COL12A1-206ENST00000474564 GAS7O60861 476 aa11.68□□□□□ -0.54
COL12A1-206ENST00000474564 FKTNO75072 461 aa11.68□□□□□ -0.54
COL12A1-206ENST00000474564 PRMT2P55345 433 aa11.68□□□□□ -0.54
COL12A1-206ENST00000474564 HTRA3P83110 453 aa11.68□□□□□ -0.54
COL12A1-206ENST00000474564 LACTBP83111 547 aaPredicted RBP11.68□□□□□ -0.54
COL12A1-206ENST00000474564 CNTN2Q02246 1040 aa11.68□□□□□ -0.54
COL12A1-206ENST00000474564 PTPAQ15257 358 aa11.68□□□□□ -0.54
COL12A1-206ENST00000474564 ZNF792Q3KQV3 632 aa11.68□□□□□ -0.54
COL12A1-206ENST00000474564 NOM1Q5C9Z4 860 aaKnown RBP11.68□□□□□ -0.54
COL12A1-206ENST00000474564 LRCH2Q5VUJ6 765 aa11.68□□□□□ -0.54
COL12A1-206ENST00000474564 CALML4Q96GE6 196 aa11.68□□□□□ -0.54
COL12A1-206ENST00000474564 CDK5RAP3Q96JB5 506 aa11.68□□□□□ -0.54
COL12A1-206ENST00000474564 MBOAT7Q96N66 472 aa11.68□□□□□ -0.54
COL12A1-206ENST00000474564 RIT2Q99578 217 aa11.68□□□□□ -0.54
COL12A1-206ENST00000474564 TEKT3Q9BXF9 490 aa11.68□□□□□ -0.54
COL12A1-206ENST00000474564 TTC12Q9H892 705 aaPredicted RBP11.68□□□□□ -0.54
COL12A1-206ENST00000474564 PCDHA7Q9UN72 937 aa11.68□□□□□ -0.54
COL12A1-206ENST00000474564 UBIAD1Q9Y5Z9 338 aa11.68□□□□□ -0.54
COL12A1-206ENST00000474564 COL11A1P12107 1806 aaPredicted RBP11.67□□□□□ -0.54
COL12A1-206ENST00000474564 SOWAHBA6NEL2 793 aa11.67□□□□□ -0.54
COL12A1-206ENST00000474564 GPR25O00155 361 aa11.67□□□□□ -0.54
COL12A1-206ENST00000474564 IPO5O00410 1097 aaKnown RBP11.67□□□□□ -0.54
COL12A1-206ENST00000474564 SLC26A4O43511 780 aa11.67□□□□□ -0.54
COL12A1-206ENST00000474564 CMA1P23946 247 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms