RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 RIOX2Q8IUF8 465 aa23.07■■□□□ 1.28
CDHR3-210ENST00000474330 CHST13Q8NET6 341 aa23.07■■□□□ 1.28
CDHR3-210ENST00000474330 CD99L2Q8TCZ2 262 aa23.07■■□□□ 1.28
CDHR3-210ENST00000474330 SYTL5Q8TDW5 730 aaPredicted RBP23.07■■□□□ 1.28
CDHR3-210ENST00000474330 SMCR8Q8TEV9 937 aaPredicted RBP23.07■■□□□ 1.28
CDHR3-210ENST00000474330 GTF3C2Q8WUA4 911 aaPredicted RBP23.07■■□□□ 1.28
CDHR3-210ENST00000474330 ACAD9Q9H845 621 aa23.07■■□□□ 1.28
CDHR3-210ENST00000474330 FAM13BQ9NYF5 915 aa23.07■■□□□ 1.28
CDHR3-210ENST00000474330 COL20A1Q9P218 1284 aa23.07■■□□□ 1.28
CDHR3-210ENST00000474330 ADGRA2Q96PE1 1338 aa23.07■■□□□ 1.28
CDHR3-210ENST00000474330 ZSWIM8A7E2V4 1837 aa23.06■■□□□ 1.28
CDHR3-210ENST00000474330 LONP1P36776 959 aaKnown RBP23.06■■□□□ 1.28
CDHR3-210ENST00000474330 CALCRLQ16602 461 aa23.06■■□□□ 1.28
CDHR3-210ENST00000474330 SPECC1Q5M775 1068 aa23.06■■□□□ 1.28
CDHR3-210ENST00000474330 C17orf99Q6UX52 265 aa23.06■■□□□ 1.28
CDHR3-210ENST00000474330 PARK7Q99497 189 aaKnown RBP23.06■■□□□ 1.28
CDHR3-210ENST00000474330 SPATC1LQ9H0A9 340 aa23.06■■□□□ 1.28
CDHR3-210ENST00000474330 RABGAP1Q9Y3P9 1069 aa23.06■■□□□ 1.28
CDHR3-210ENST00000474330 CNMDO75829 334 aa23.05■■□□□ 1.28
CDHR3-210ENST00000474330 NSMFQ6X4W1 530 aa23.05■■□□□ 1.28
CDHR3-210ENST00000474330 RBPJLQ9UBG7 517 aa23.05■■□□□ 1.28
CDHR3-210ENST00000474330 RPTORQ8N122 1335 aa23.05■■□□□ 1.28
CDHR3-210ENST00000474330 LETM1O95202 739 aaPredicted RBP23.04■■□□□ 1.28
CDHR3-210ENST00000474330 SYKP43405 635 aa23.04■■□□□ 1.28
CDHR3-210ENST00000474330 PKN2Q16513 984 aaKnown RBP23.04■■□□□ 1.28
CDHR3-210ENST00000474330 Q4G0T1 1027 aa23.04■■□□□ 1.28
CDHR3-210ENST00000474330 OTOP1Q7RTM1 612 aa23.04■■□□□ 1.28
CDHR3-210ENST00000474330 ERO1AQ96HE7 468 aa23.04■■□□□ 1.28
CDHR3-210ENST00000474330 PAGR1Q9BTK6 254 aa23.04■■□□□ 1.28
CDHR3-210ENST00000474330 NUP62CLQ9H1M0 184 aa23.04■■□□□ 1.28
CDHR3-210ENST00000474330 CLSTN2Q9H4D0 955 aa23.04■■□□□ 1.28
CDHR3-210ENST00000474330 FBXO40Q9UH90 709 aa23.04■■□□□ 1.28
CDHR3-210ENST00000474330 KCNH3Q9ULD8 1083 aa23.04■■□□□ 1.28
CDHR3-210ENST00000474330 KINO60870 393 aaKnown RBP23.04■■□□□ 1.28
CDHR3-210ENST00000474330 ZNF202O95125 648 aa23.04■■□□□ 1.28
CDHR3-210ENST00000474330 BAATQ14032 418 aaPredicted RBP23.04■■□□□ 1.28
CDHR3-210ENST00000474330 SLC30A10Q6XR72 485 aa23.04■■□□□ 1.28
CDHR3-210ENST00000474330 FRMPD4Q14CM0 1322 aa23.04■■□□□ 1.28
CDHR3-210ENST00000474330 USP49Q70CQ1 688 aa23.03■■□□□ 1.28
CDHR3-210ENST00000474330 TIGD1Q96MW7 591 aa23.03■■□□□ 1.28
CDHR3-210ENST00000474330 CPA4Q9UI42 421 aa23.03■■□□□ 1.28
CDHR3-210ENST00000474330 BRCA2P51587 3418 aa23.03■■□□□ 1.28
CDHR3-210ENST00000474330 FAM86B1E9PN63 330 aa23.02■■□□□ 1.28
CDHR3-210ENST00000474330 PEX10O60683 326 aa23.02■■□□□ 1.28
CDHR3-210ENST00000474330 SLC25A27O95847 323 aa23.02■■□□□ 1.28
CDHR3-210ENST00000474330 FAM86B2P0C5J1 330 aa23.02■■□□□ 1.28
CDHR3-210ENST00000474330 COPB2P35606 906 aa23.02■■□□□ 1.28
CDHR3-210ENST00000474330 ZNF76P36508 570 aa23.02■■□□□ 1.28
CDHR3-210ENST00000474330 GCLCP48506 637 aaPredicted RBP23.02■■□□□ 1.28
CDHR3-210ENST00000474330 ZNF445P59923 1031 aa23.02■■□□□ 1.28
CDHR3-210ENST00000474330 SYMPKQ92797 1274 aaKnown RBP23.02■■□□□ 1.28
CDHR3-210ENST00000474330 HAS1Q92839 578 aa23.02■■□□□ 1.28
CDHR3-210ENST00000474330 LENG9Q96B70 501 aa23.02■■□□□ 1.28
CDHR3-210ENST00000474330 EPSTI1Q96J88 318 aa23.02■■□□□ 1.28
CDHR3-210ENST00000474330 AK8Q96MA6 479 aa23.02■■□□□ 1.28
CDHR3-210ENST00000474330 TAAR1Q96RJ0 339 aa23.02■■□□□ 1.28
CDHR3-210ENST00000474330 MOV10L1Q9BXT6 1211 aaKnown RBP23.02■■□□□ 1.28
CDHR3-210ENST00000474330 TXNRD2Q9NNW7 524 aa23.02■■□□□ 1.28
CDHR3-210ENST00000474330 KCNMB3Q9NPA1 279 aa23.02■■□□□ 1.28
CDHR3-210ENST00000474330 A1CFQ9NQ94 594 aaKnown RBP23.02■■□□□ 1.28
CDHR3-210ENST00000474330 CYP39A1Q9NYL5 469 aa23.02■■□□□ 1.28
CDHR3-210ENST00000474330 TRIM17Q9Y577 477 aa23.02■■□□□ 1.28
CDHR3-210ENST00000474330 TBX3O15119 743 aa23.01■■□□□ 1.27
CDHR3-210ENST00000474330 TXKP42681 527 aa23.01■■□□□ 1.27
CDHR3-210ENST00000474330 FXR2P51116 673 aaKnown RBP eCLIP23.01■■□□□ 1.27
CDHR3-210ENST00000474330 ARHGAP39Q9C0H5 1083 aa23.01■■□□□ 1.27
CDHR3-210ENST00000474330 TNMDQ9H2S6 317 aa23.01■■□□□ 1.27
CDHR3-210ENST00000474330 IGLV3-22A0A075B6J6 115 aa23■■□□□ 1.27
CDHR3-210ENST00000474330 CCDC85CA6NKD9 419 aa23■■□□□ 1.27
CDHR3-210ENST00000474330 CTAGE5O15320 804 aa23■■□□□ 1.27
CDHR3-210ENST00000474330 CTGFP29279 349 aa23■■□□□ 1.27
CDHR3-210ENST00000474330 PRR16Q569H4 304 aa23■■□□□ 1.27
CDHR3-210ENST00000474330 FBXO46Q6PJ61 603 aaPredicted RBP23■■□□□ 1.27
CDHR3-210ENST00000474330 SYCE3A1L190 88 aa23■■□□□ 1.27
CDHR3-210ENST00000474330 BCRP11274 1271 aa23■■□□□ 1.27
CDHR3-210ENST00000474330 TECP42680 631 aa23■■□□□ 1.27
CDHR3-210ENST00000474330 UBXN2AP68543 259 aa23■■□□□ 1.27
CDHR3-210ENST00000474330 LACTBP83111 547 aaPredicted RBP23■■□□□ 1.27
CDHR3-210ENST00000474330 PDIA5Q14554 519 aa23■■□□□ 1.27
CDHR3-210ENST00000474330 CAMK4Q16566 473 aa23■■□□□ 1.27
CDHR3-210ENST00000474330 TMEM266Q2M3C6 531 aa23■■□□□ 1.27
CDHR3-210ENST00000474330 Q3C1V9 767 aa23■■□□□ 1.27
CDHR3-210ENST00000474330 PCNX4Q63HM2 1172 aa23■■□□□ 1.27
CDHR3-210ENST00000474330 RBM43Q6ZSC3 357 aaKnown RBP23■■□□□ 1.27
CDHR3-210ENST00000474330 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23■■□□□ 1.27
CDHR3-210ENST00000474330 NCAPG2Q86XI2 1143 aa23■■□□□ 1.27
CDHR3-210ENST00000474330 SLFN12Q8IYM2 578 aa23■■□□□ 1.27
CDHR3-210ENST00000474330 IGSF22Q8N9C0 903 aa23■■□□□ 1.27
CDHR3-210ENST00000474330 RMDN3Q96TC7 470 aa23■■□□□ 1.27
CDHR3-210ENST00000474330 EFCC1Q9HA90 598 aa23■■□□□ 1.27
CDHR3-210ENST00000474330 PXMP2Q9NR77 195 aa23■■□□□ 1.27
CDHR3-210ENST00000474330 MARCH6O60337 910 aa22.99■■□□□ 1.27
CDHR3-210ENST00000474330 ERVK-9P63128 1117 aa22.99■■□□□ 1.27
CDHR3-210ENST00000474330 ERVK-24P63145 666 aa22.99■■□□□ 1.27
CDHR3-210ENST00000474330 CEP55Q53EZ4 464 aa22.99■■□□□ 1.27
CDHR3-210ENST00000474330 ETNPPLQ8TBG4 499 aa22.99■■□□□ 1.27
CDHR3-210ENST00000474330 RAB34Q9BZG1 259 aa22.99■■□□□ 1.27
CDHR3-210ENST00000474330 CCSER1Q9C0I3 900 aa22.99■■□□□ 1.27
CDHR3-210ENST00000474330 TTC12Q9H892 705 aaPredicted RBP22.99■■□□□ 1.27
CDHR3-210ENST00000474330 PCDHA12Q9UN75 941 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms