RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 FMNL3Q8IVF7 1028 aa20.54■□□□□ 0.88
ECHDC1-214ENST00000474289 CACNA2D3Q8IZS8 1091 aa20.54■□□□□ 0.88
ECHDC1-214ENST00000474289 RNF10Q8N5U6 811 aaKnown RBP20.54■□□□□ 0.88
ECHDC1-214ENST00000474289 NFS1Q9Y697 457 aa20.54■□□□□ 0.88
ECHDC1-214ENST00000474289 SNAP23O00161 211 aa20.54■□□□□ 0.88
ECHDC1-214ENST00000474289 VEGFAP15692 232 aaPredicted RBP20.54■□□□□ 0.88
ECHDC1-214ENST00000474289 RRAGAQ7L523 313 aa20.54■□□□□ 0.88
ECHDC1-214ENST00000474289 RPSAP08865 295 aaKnown RBP20.53■□□□□ 0.88
ECHDC1-214ENST00000474289 STK4Q13043 487 aa20.53■□□□□ 0.88
ECHDC1-214ENST00000474289 UAP1Q16222 522 aaPredicted RBP20.53■□□□□ 0.88
ECHDC1-214ENST00000474289 ASTE1Q2TB18 679 aaPredicted RBP20.53■□□□□ 0.88
ECHDC1-214ENST00000474289 KIF6Q6ZMV9 814 aa20.53■□□□□ 0.88
ECHDC1-214ENST00000474289 TAF1DQ9H5J8 278 aaPredicted RBP20.53■□□□□ 0.88
ECHDC1-214ENST00000474289 PPP1R12BO60237 982 aaPredicted RBP20.53■□□□□ 0.88
ECHDC1-214ENST00000474289 FTCDO95954 541 aa20.53■□□□□ 0.88
ECHDC1-214ENST00000474289 ECHS1P30084 290 aa20.53■□□□□ 0.88
ECHDC1-214ENST00000474289 RNASE9P60153 205 aaKnown RBP20.53■□□□□ 0.88
ECHDC1-214ENST00000474289 ZNF844Q08AG5 666 aa20.53■□□□□ 0.88
ECHDC1-214ENST00000474289 INPP4AQ96PE3 977 aaPredicted RBP20.53■□□□□ 0.88
ECHDC1-214ENST00000474289 MMRN2Q9H8L6 949 aa20.53■□□□□ 0.88
ECHDC1-214ENST00000474289 GRID2IPA4D2P6 1211 aa20.52■□□□□ 0.88
ECHDC1-214ENST00000474289 PALMO75781 387 aa20.52■□□□□ 0.88
ECHDC1-214ENST00000474289 CTSWP56202 376 aa20.52■□□□□ 0.88
ECHDC1-214ENST00000474289 HLTFQ14527 1009 aaKnown RBP eCLIP20.52■□□□□ 0.88
ECHDC1-214ENST00000474289 CCDC178Q5BJE1 867 aa20.52■□□□□ 0.88
ECHDC1-214ENST00000474289 NAIF1Q69YI7 327 aaPredicted RBP20.52■□□□□ 0.88
ECHDC1-214ENST00000474289 SRBD1Q8N5C6 995 aaKnown RBP20.52■□□□□ 0.88
ECHDC1-214ENST00000474289 CCT6BQ92526 530 aa20.52■□□□□ 0.88
ECHDC1-214ENST00000474289 RAPGEF5Q92565 580 aa20.52■□□□□ 0.88
ECHDC1-214ENST00000474289 TATDN2Q93075 761 aa20.52■□□□□ 0.88
ECHDC1-214ENST00000474289 CNOT8Q9UFF9 292 aaKnown RBP20.52■□□□□ 0.88
ECHDC1-214ENST00000474289 FCER1AP12319 257 aa20.52■□□□□ 0.87
ECHDC1-214ENST00000474289 GBP2P32456 591 aaPredicted RBP20.52■□□□□ 0.87
ECHDC1-214ENST00000474289 ERVK-9P63128 1117 aa20.52■□□□□ 0.87
ECHDC1-214ENST00000474289 PDE4DQ08499 809 aa20.52■□□□□ 0.87
ECHDC1-214ENST00000474289 SEMA3FQ13275 785 aa20.52■□□□□ 0.87
ECHDC1-214ENST00000474289 NAA25Q14CX7 972 aa20.52■□□□□ 0.87
ECHDC1-214ENST00000474289 SDR42E1Q8WUS8 393 aa20.52■□□□□ 0.87
ECHDC1-214ENST00000474289 BAP1Q92560 729 aa20.52■□□□□ 0.87
ECHDC1-214ENST00000474289 HVCN1Q96D96 273 aa20.52■□□□□ 0.87
ECHDC1-214ENST00000474289 PAPPAQ13219 1627 aa20.52■□□□□ 0.87
ECHDC1-214ENST00000474289 ZNF142P52746 1687 aaPredicted RBP20.51■□□□□ 0.87
ECHDC1-214ENST00000474289 TNS3Q68CZ2 1445 aa20.51■□□□□ 0.87
ECHDC1-214ENST00000474289 MYBP10242 640 aa20.51■□□□□ 0.87
ECHDC1-214ENST00000474289 SCG2P13521 617 aa20.51■□□□□ 0.87
ECHDC1-214ENST00000474289 CTNNA1P35221 906 aaKnown RBP20.51■□□□□ 0.87
ECHDC1-214ENST00000474289 UBA7P41226 1012 aa20.51■□□□□ 0.87
ECHDC1-214ENST00000474289 PUM3Q15397 648 aaKnown RBP20.51■□□□□ 0.87
ECHDC1-214ENST00000474289 ACCSLQ4AC99 568 aa20.51■□□□□ 0.87
ECHDC1-214ENST00000474289 VWA3BQ502W6 1294 aa20.51■□□□□ 0.87
ECHDC1-214ENST00000474289 DTHD1Q6ZMT9 781 aa20.51■□□□□ 0.87
ECHDC1-214ENST00000474289 TOM1L2Q6ZVM7 507 aa20.51■□□□□ 0.87
ECHDC1-214ENST00000474289 DNAJC10Q8IXB1 793 aa20.51■□□□□ 0.87
ECHDC1-214ENST00000474289 NDST4Q9H3R1 872 aa20.51■□□□□ 0.87
ECHDC1-214ENST00000474289 PACSIN2Q9UNF0 486 aaPredicted RBP20.51■□□□□ 0.87
ECHDC1-214ENST00000474289 DNAJC8O75937 253 aaPredicted RBP20.51■□□□□ 0.87
ECHDC1-214ENST00000474289 PAEPP09466 180 aa20.51■□□□□ 0.87
ECHDC1-214ENST00000474289 PPP2R2AP63151 447 aa20.51■□□□□ 0.87
ECHDC1-214ENST00000474289 BIRC3Q13489 604 aa20.51■□□□□ 0.87
ECHDC1-214ENST00000474289 ODF2Q5BJF6 829 aa20.51■□□□□ 0.87
ECHDC1-214ENST00000474289 ARMC9Q7Z3E5 817 aa20.51■□□□□ 0.87
ECHDC1-214ENST00000474289 NLRP10Q86W26 655 aa20.51■□□□□ 0.87
ECHDC1-214ENST00000474289 KLHL7Q8IXQ5 586 aa20.51■□□□□ 0.87
ECHDC1-214ENST00000474289 ISCUQ9H1K1 167 aa20.51■□□□□ 0.87
ECHDC1-214ENST00000474289 BCCIPQ9P287 314 aaKnown RBP eCLIP20.51■□□□□ 0.87
ECHDC1-214ENST00000474289 TNS2Q63HR2 1409 aa20.5■□□□□ 0.87
ECHDC1-214ENST00000474289 FAM205AQ6ZU69 1335 aa20.5■□□□□ 0.87
ECHDC1-214ENST00000474289 ATP6V1G2O95670 118 aa20.5■□□□□ 0.87
ECHDC1-214ENST00000474289 ELF3P78545 371 aaPredicted RBP20.5■□□□□ 0.87
ECHDC1-214ENST00000474289 GKAP1Q5VSY0 366 aaPredicted RBP20.5■□□□□ 0.87
ECHDC1-214ENST00000474289 FGFR2P21802 821 aa20.49■□□□□ 0.87
ECHDC1-214ENST00000474289 NBPF9Q3BBW0 867 aa20.49■□□□□ 0.87
ECHDC1-214ENST00000474289 HGSNATQ68CP4 663 aa20.49■□□□□ 0.87
ECHDC1-214ENST00000474289 TAX1BP1Q86VP1 789 aa20.49■□□□□ 0.87
ECHDC1-214ENST00000474289 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.49■□□□□ 0.87
ECHDC1-214ENST00000474289 P3H4Q92791 437 aa20.49■□□□□ 0.87
ECHDC1-214ENST00000474289 TBC1D31Q96DN5 1066 aa20.49■□□□□ 0.87
ECHDC1-214ENST00000474289 TMEM60Q9H2L4 133 aa20.49■□□□□ 0.87
ECHDC1-214ENST00000474289 NOD2Q9HC29 1040 aa20.49■□□□□ 0.87
ECHDC1-214ENST00000474289 PHF20L1A8MW92 1017 aa20.49■□□□□ 0.87
ECHDC1-214ENST00000474289 DCDC2CA8MYV0 355 aa20.49■□□□□ 0.87
ECHDC1-214ENST00000474289 IRS4O14654 1257 aaPredicted RBP20.49■□□□□ 0.87
ECHDC1-214ENST00000474289 CALM1P0DP23 149 aa20.49■□□□□ 0.87
ECHDC1-214ENST00000474289 CALM2P0DP24 149 aa20.49■□□□□ 0.87
ECHDC1-214ENST00000474289 CALM3P0DP25 149 aa20.49■□□□□ 0.87
ECHDC1-214ENST00000474289 TNNC1P63316 161 aa20.49■□□□□ 0.87
ECHDC1-214ENST00000474289 MSL1Q68DK7 614 aa20.49■□□□□ 0.87
ECHDC1-214ENST00000474289 USP38Q8NB14 1042 aa20.49■□□□□ 0.87
ECHDC1-214ENST00000474289 TRIM9Q9C026 710 aa20.49■□□□□ 0.87
ECHDC1-214ENST00000474289 KDM4CQ9H3R0 1056 aa20.49■□□□□ 0.87
ECHDC1-214ENST00000474289 SLC8A3P57103 927 aa20.48■□□□□ 0.87
ECHDC1-214ENST00000474289 TDRD12Q587J7 1177 aaKnown RBP20.48■□□□□ 0.87
ECHDC1-214ENST00000474289 RUFY4Q6ZNE9 571 aa20.48■□□□□ 0.87
ECHDC1-214ENST00000474289 RASGRP4Q8TDF6 673 aa20.48■□□□□ 0.87
ECHDC1-214ENST00000474289 CCSER1Q9C0I3 900 aa20.48■□□□□ 0.87
ECHDC1-214ENST00000474289 SEMA6BQ9H3T3 888 aa20.48■□□□□ 0.87
ECHDC1-214ENST00000474289 ANAPC4Q9UJX5 808 aa20.48■□□□□ 0.87
ECHDC1-214ENST00000474289 SSU72P8A0A1W2PR75 194 aa20.48■□□□□ 0.87
ECHDC1-214ENST00000474289 RBAK-RBAKDNI3L0D1 243 aa20.48■□□□□ 0.87
ECHDC1-214ENST00000474289 SKAP2O75563 359 aaPredicted RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms